Epinephelus fuscoguttatus (brown-marbled grouper): 125887592
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Entry
125887592 CDS
T08419
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125887592 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125887592 (lrrc4ca)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
NGL family
125887592 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
125887592
NCBI-ProteinID:
XP_049430505
LinkDB
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Position
LG4:19156479..19397749
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AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTAVQQKVGP
TPSAGMWESVSPTSTTTTTVRTPVSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtggca
gggctggtacgtgctcagacgtgcccttctgtctgctcctgtagcaaccagttcagcaaa
gtcatctgcacgcggcgaggcctgcgggatgtccctgatggcatctccaccaacacacgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcacctg
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgagcttggggcc
ttcaatggactggccagtctcaataccttggagctttttgataaccgcctcaccactatc
ccaaacggggcatttgagtacttgtccaaactaaaggagctttggctgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacggcggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatcta
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcagggaaccagctaactgtcatccgacctggctctttt
aaagggctcatccatttgcagaagctatggatgatgcatgcccagatccagaccatagaa
aggaactctttcgatgacctgcagtcactagtggagctcaatctagcccataacaacctt
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctaagctggtggcttaaggaaatg
gtaccagcaaacaccagctgctgtgcgcgctgcagctcaccaacccaccacaagggacga
tacattggcgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagagggaagtgctgcggagttgaaatgcagagccagctcc
ttgacctcagtaagctggattacacccaatggttccatcatgacacacggtgcttacaag
gtcagaatctccgtgctgaatgacggcactctgaacttcaccaatgttaccatgcaggac
acgggcacgtacacatgtatggtcagtaattctgcaggtaacacaacagcatctgccaca
ctcaatgtgtcctcaacagagaacagcagctttagctacttcaccacagtgacagtggaa
accatagaaacgccacataatgaaggcttcaccaccgcagtgcaacagaaggtaggcccc
actccctctgctggtatgtgggagtctgtttcacccacctctacaactaccaccacagtc
cggaccccagtctccacccgcgccacagagaagacttacacaatccctgtcacggagctg
ggtggggagggctcgctgaacggcttggatgaggtaatgaagacgaccaagatcatcatt
ggctgcttcgttgcaatcacactcatggcagcggtcatgctgattatcttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcgcccacacgcaccattgagatcatcaat
gtggacgaggactgtgtaacaggaggcccgggcatggagggccacctgaccctgcctcct
cttgagcacgagcacctcaaccattataacacctataagactgcatacaaccatgcctcc
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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