Epinephelus fuscoguttatus (brown-marbled grouper): 125887624
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Entry
125887624 CDS
T08419
Symbol
cnot4a
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125887624 (cnot4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125887624 (cnot4a)
03019 Messenger RNA biogenesis [BR:
efo03019
]
125887624 (cnot4a)
04121 Ubiquitin system [BR:
efo04121
]
125887624 (cnot4a)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125887624 (cnot4a)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
125887624 (cnot4a)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125887624 (cnot4a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125887624 (cnot4a)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125887624 (cnot4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Med7
DZR_2
RDD1
Torus
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
125887624
NCBI-ProteinID:
XP_049430547
LinkDB
All DBs
Position
LG4:complement(31240622..31251604)
Genome browser
AA seq
802 aa
AA seq
DB search
MSHSPEMKDDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGRFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKINPSFLQPPACGTEKSKSKSNSTQRTNSSNGKDGWPTLSGHNKLANGLSEDRKS
PPLLDYLDQEVITSDGLETDLGPGQRTALSPFSSNCDSNSPSDKPPESIGMVNGETLQQI
PTSDSPSPPPGLTKPSLVVPISVSDLTARSPFEGAAAESQSLFSDNSNFRHPNPLPAGLP
PFPSSPRGNSDWPMTPEPQSLFTSDTIPVSSSTDWQAAFGFGSSSKQQDDDLGFDPFDVT
RKALADLIEKELSVQDQSPLSPGLFPHGGSNHGPSLPPLNPNPGASHHFPSGLPRLPQLH
HRAVYSSFSFPGSQNSQASQQQQPAAARHPWMGVPTRNNLTHLNHSASAASHSNFLDLNL
PPQHNTGLGGIPISENSGSIDGLNVKEWQDGLRALLPNININFGGLPNSSSSSSSSSSNS
VNHIGGPAGPAGISHSLSWDGTASWMDPAIITGIPASAGNSLDCLQDDNPPHWLKSLQAL
TEMDGPASSAVPTPPQPLHSGLLDAHLPLHHRAAGGWAPYLPPPTANPASQFHSPPPGFQ
TAFRPPGQPATELLQSAAVDRH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagccctgaaatgaaggacgaccccatggagtgccctctgtgcatggagccg
ctggagattgacgacgtcaacttcttcccttgcacctgcggctatcagatctgccgcttc
tgttggcatcgcatccgcacagacgagaacggtctctgccccgcctgcagaaagccgtac
ccagaggaccccgccgtgtacaagcctctgtcacaggaggagatccaaaggataaagaac
gaaaagaagcagaaacagaacgagaaaaagcagaaggtgacagaaaaccgaaagcatctg
gccagcgtcagagtggtccagagaaacctggtgtttgtggtggggctctcacagcgactc
gccgacccggaggtcctaaaacgaccagagtattttgggaggtttgggaaaatccataaa
gtggtcatcaacaatagcacatcctacgcaggttcacaggggcccagtgccagcgcttat
gtcacttacatccgctctgaagacgctctaagagcaatacagtgtgtgaacaatgtggtt
gttgatggcagaacactcaaggcttctttaggcacaacaaagtactgcagttactttctt
aaaagtatgcagtgtcccaaacctgattgtatgtatctacatgagctgggggatgaagca
gctagctttactaaagaggagatgcaggcgggaaaacatcaagagtatgagcagaaactc
ctccaagacctctataaaattaaccctagctttctacaacctccagcatgtggaacagag
aagtcaaagagtaaatccaactccacacagagaaccaacagtagcaatggtaaagatggg
tggccgacgctgtcaggacacaacaaactggccaacgggctttcagaggaccgcaagtcc
cctccgctgctagactatctagaccaagaagttattacttcagatgggctagaaacagac
ctgggtcctggtcagcgtacagccctgtcgcccttctcctctaactgtgacagtaacagt
cccagcgacaaacctccagagtcaatcggtatggtgaatggagagactttacaacagata
cccaccagtgactccccctctcctcccccgggtttaaccaagcccagcctggtggtgccc
atcagcgtgtcagacctcacagcccgttcaccctttgagggagcggcagctgagtcccag
tcactcttctcagacaacagtaacttcagacatcctaaccctctccccgctggcctgccc
cccttccccagctccccccgtggcaactctgactggcccatgacccctgaaccacagagc
ctcttcacatcagacacaataccagtgtcttcctccacagattggcaggcggcctttggc
ttcggctcgtccagcaaacaacaggacgacgacctcggcttcgatcctttcgacgtcact
cgcaaggccttggccgacctgatagagaaggagctgtcggtgcaggatcagagccccttg
tccccggggctcttcccccacggtgggagcaatcacggtcccagcctgcctcctctcaac
ccaaaccccggcgcctcacaccacttccccagcggcttaccacgcctcccccagctccac
cacagagccgtctacagctccttcagtttccccggcagtcagaacagccaggccagtcag
cagcagcagccagccgcagccagacacccctggatgggcgtcccgacacgaaataacctc
acacacttgaaccactcagccagtgctgcctcacacagtaatttcctggacctgaatctg
ccccctcagcacaacacagggctgggagggatccccatctcagaaaacagtggctctata
gacggcttaaatgtgaaagagtggcaggacggactgagagctctcctgcccaacatcaat
atcaacttcgggggcctcccaaactcctcttcctcttcatcctcctcatcctccaacagt
gttaaccacatcggtgggccggcggggcctgcgggcatctcacacagcctgagctgggac
ggcacagccagttggatggaccctgctatcatcacaggcatcccggcctcagcaggcaac
agtttagactgtctccaggacgacaacccaccacactggctcaagtccctgcaggcgctc
acagagatggacggtccggccagctcagcagtgcccactcccccccagcccctccacagc
ggcctcctggacgcccacctccccctccaccacagagccgccggcggctgggctccttac
ctgccccctcccacagccaaccctgccagccagttccactcccctccccccggcttccag
accgccttcagacccccgggacagcccgccacagagctgctacagagtgccgctgtggac
cgccactga
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integrated database retrieval system
