Epinephelus fuscoguttatus (brown-marbled grouper): 125887704
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Entry
125887704 CDS
T08419
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125887704 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125887704 (sf3b3)
03041 Spliceosome [BR:
efo03041
]
125887704 (sf3b3)
03036 Chromosome and associated proteins [BR:
efo03036
]
125887704 (sf3b3)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125887704 (sf3b3)
Spliceosome [BR:
efo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125887704 (sf3b3)
Complex B
125887704 (sf3b3)
Complex C
U2 SnRNP specific factors
125887704 (sf3b3)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125887704 (sf3b3)
TFTC complex
125887704 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
125887704
NCBI-ProteinID:
XP_049430677
LinkDB
All DBs
Position
LG4:7212323..7247706
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNQFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLISGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcacccttcagcgtgccacgggcatcactcatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccagggggaagatcttggaatta
ttgcggccagacgccaacacaggaaaggtgcacactttgctcacagtggaggtgtttggc
atcgttagatccctgatggccttcagactaactggaggaaccaaagactatattgttgtt
gggagtgacagcggtcgtattgtcatcctggaatatcacccatcgaaaaaccagtttgag
aagatccatcaggaaacatttgggaagagcggctgccggcgcatcgtccctggacagttc
ctggctgtcgacccaaaaggcagagctgttatgataggagctatagagaagcagaagctg
gtttatattctgaacagagatgcagctgccagactgaccatctcctctccactggaagcc
cataaagcaaacacactggtctaccatgtagtgggagtcgatgtcggttttgaaaatccc
atgtttgcctgtctggagatggactatgaggaagctgacaatgacccgacaggagaggct
gccgccaacacgcagcaaacgctcaccttttacgagctggatctcggcttgaatcacgtg
gtgcgcaagtacagtgaagcattagaagagcatggaaatttcctcatcaccgttcctggt
ggttcagacgggcccagtggagttctgatctgctctgaaaactacatcacttacaagaat
tttggagaccagcccgacattcgctgtcccatcccacgacgcaggaatgacctagatgac
ccggagcgcggcatgatatttgtttgctcagccacccacaagacaaagtccatgttcttc
ttcctggcccagacagagcagggagacatctttaaggttaccctggaaacagatgaagaa
atggtcacagaaatcaggctgaaatactttgacacaatccctgtggcaacagccatgtgt
gtcctgaagactggtttcttgtttgtgtcttcagagtttggaaaccattacctttaccag
attgcccacttgggtgatgatgatgaagagcctgagttctcctctgcgatgccactggag
gagggagacaccttcttctttcaaccccgccctctcaagaacctggtgctggtggatgaa
caggagaacttgtcacccatcatgtcctgccagattgctgatttggccaatgaagataca
ccacagttgtacgtcgcctgtggacgaggaccccggtctactctgagggtccttagacat
ggacttgaggtatcagagatggctgtgtctgagctgcccggtaaccccaacgctgtgtgg
acagtacgcagacatgtggacgatgagtttgatgcctacatcatagtgtctttcgtgaac
gctactctggttctgtccatcggtgagactgtagaggaagtgacagactctggatttctg
ggaacaacacccactctctcctgctccctgctcggtgaagacgccctggtgcaggtgtac
ccagatggtattcgccacatccgagcagacaagcgtgtgaatgagtggaagactcccggt
aaaaagaccattgtccgctgtgctgtgaaccagcgacaggttgttatcgcactcactgga
ggagagctggtctactttgagatggacccgtcgggccagctgaatgagtacaccgagcgg
aaggagatgtctgcagatgtggtttgtatgagcttggccaacgttccacctggtgaacaa
cgttcgcgattcctggccgtgggacttgttgacaacactgtccgaatcatctccctggac
ccttcggactgcctgcagccgctgagtatgcaggctctgcccgcccagccagagagtctg
tgtattgttgagatgggaggggtcgagaaacaggatgaacttggagaaaagggaaccatc
ggcttcctctacctcaacatagggcttcagaatggtgtgctgctgaggactgtgctggac
ccagtgaccggtgacctgtcagataccagaacacgctacctgggttcacgacctgtcaaa
ctcttcagagtcaggatgcagggacaggaagctgtgctggcaatgtccagtcgctcctgg
ctcagctactcgtaccagtctcgcttccatctgacccctctgtcatatgagaccctggag
tacgcctctggctttgcctccgagcagtgccctgaaggtatcgtggccatttccaccaac
acactgagaatcttggctttggagaaattaggagctgtcttcaaccaggtggcctttcct
ctgcagtacactcccaggaaatttgtcatccaccccgagaccaacaacctgattttgatc
gagactgaccacaatgcctacaccgaggcaaccaaagctcagagaaagcagcaaatggct
gaggagatggtggaggctgctggtgaggacgaaagagaactggctgctgaaatggcagct
gctttcctcaatgagaatctcccagaagccatttttggcgcacctaaagctggagcagga
cagtgggcctcactggtgcgtcttgtcaaccccatacagggtacaacactggaccaggtg
cagctagaacagaacgaagctgcattcagcgttgcagtgtgtcgtttccccaacacagga
gatgattggtatgttctggtgggcgttgccagagacatgattctcaaccccagatcagtg
ggcggtggctttatctacacctatcggctcatcagcggaggggagaaactggagtttgtg
cacaagaccccagtcgaggacgtgcctttggccattgctccgttccagggacgagtcctg
gtgggagttgggaaacttctaagaatctacgacctgggcaagaagaagctgcttcgcaag
tgtgaaaacaagcacgttcccaacctggtgactggcatccatacaataggccagcgtgtg
atcgtctctgacgtgcaggagagcctgttctgggtgcgctaccgacgcaatgagaaccag
ctcatcatctttgctgatgacacatatccccgctgggtaaccacagcctgtctgctcgac
tatgacaccatggcctccgctgacaagtttggcaacatcagcattgtgcgtctacccccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctttatgggacagaggc
ctccttaatggagcatcacagaaggctgaggtgataatgaactaccacgtgggagagacg
gtgctgtccctccagaaaaccactctgatccccggaggttccgagtccatggtctacacc
acactgtctggaggcatcggcatactggttccattcacctcacacgaggaccatgacttc
ttccagcatttagagatgcatatgcgctctgagtttcctcccctgtgtggcagagaccat
ctcagttttagatcctactacttcccagtcaagaatgtgattgacggagatctgtgtgag
cagtttaacagtatggaccctcacaagcagaaaagtgtggctgaagagctggacagaacg
ccccctgaggtctctaagaaactggaggacattcgcacccgctacgccttctaa
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integrated database retrieval system
