Epinephelus fuscoguttatus (brown-marbled grouper): 125887736
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Entry
125887736 CDS
T08419
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125887736 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125887736 (lamb1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125887736
NCBI-ProteinID:
XP_049430730
LinkDB
All DBs
Position
LG4:38165860..38202707
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AA seq
1799 aa
AA seq
DB search
MLGLQLTVLLALQVFTCAQEGGTSAGGAPDDVSLPEFSDMCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLNRPEPFCIVSHLQEEKKCFVCDSSTPYDELSEQMSGHRIENVVTTFAPNRL
KTWWQSENGMENVTIQLNLEAEFHFTHLIMTFRTFRPAAMVIERSADFGKTWQVYRYFAY
DCESSFPSVSQGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIQGAGQ
TSEGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AVFRASGNVSGGVCDDCQHHTTGHNCEQCEPFYYQHPERDIRDPNICQPCDCDPVGSLNG
GICDGMTDVRAGLIAGQCRCKVNVEGERCERCKQAYYGLSDDPEGCKACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDLGGAINNQCDQVTGQC
VCRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPLDRSPTWTGIGLV
NVPEGAFLEFTVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPITADSRCVNTVPD
DDNQMISLHPGSRYVALPRPVCFETGLNYTIRLSLPRYSALSDVQSPYTLIDSIVLMPHC
KNMDIFTASEGGDSNGNSGWETFQRYRCLENSQSVIKSPMTDICRNYIFSISAMLHQGAK
ECQCDPQGSLSTVCDPNGGQCQCRPNVVGRNCDRCAPATYQFGPNGCKACACDPQGSQSS
FCNQLTGQCVCVSGAYSRQCDRCLPGHWGFPSCRPCSCNGHTDECDPNTGRCISCRDHTT
GHTCDRCLDGYYGDPTLGSGDHCRPCMCPDGPGSLRQFAGSCYRGDDSQQAICVCNTGYK
GARCDECSPGYYGNPGESGGQCQPCQCNNNIDMLDPDSCDARTGECLRCLYHSEGASCQL
CKLGYYGNALQQDCRKCVCNKLGSENSSCPSSGDCHCDRSSGQCQCLPNVIGQHCDRCAP
DTWNMASGHGCQTCNCNPKHSYGMSCNEISGHCSCQPGFGGRTCSECKELFWGDPEVKCH
ACDCDPQGISEQQCNKANGHCVCVEGVSGPRCDTCARGFSGTFPDCQRCHQCFAEWDEVI
GQLTNQTHRLVNKVNAIKANGVSGPYRKSIDSMEKSVADIRVILNQNPASQPLSEIQELL
QQASDLMGALSQMLNRTEETLIQVEDEDAAAGTKLDSLMSDTQKLERTVQELLDQVEFIK
NSDIRGATNSVTKYFLQSQAAEARANASTVDPDSPVENSSTLRQLTEDKMNQTREEFQRR
HTEYAQRLDDLAGELQTLDLSEISHKTCGSPSSGQDSCSSSPCGGLGCVDSEGRTKCGGE
GCDGVVTTAHNAWKKAQDSEQEIISAMEEVEKLSKMVSEAKLKADEAKLSAQDVLMKTNR
TKQKVQQSNEELRGLIKQIRDFLTQDAADLESVELVANEVLAMQMPTTPAQLQNLTDEIR
QKVGELGNVETILQQSADDIQRAENLLEQARRTSEEASNVKDSAEKVKQALEEAKRAQTA
ASSAIQQATADIQNTNNLLSSVTSETADAELKLANATQRLQSLEQDVTLLRDKGVNITVS
TKRTNEDAATIRKIAEEVKKDLDSELKNKYSTVEELIGTKAGGLADAKKRAESLQQEAKD
LLLKASNKLQLLKDLEKSYEDNQRTLEVKAEQLVELEAAVKELLQEISHKVTIYSTCVF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcttcagctcacggtgctgctggctctgcaggtgtttacctgcgctcaggag
ggcgggacctcagcaggaggggccccggatgatgtcagcctcccggagttcagtgatatg
tgcacagagggcagttgttacccagcaacaggagaccttctgattggccgagcccaccaa
ctgtcatccacttccacctgtggactgaaccgacctgaaccgttctgcatcgtcagccat
ctgcaggaggagaagaagtgttttgtgtgtgactcttcaacgccgtatgacgagctgagc
gaacagatgagcggccatcgcattgagaacgtcgtcaccacattcgctccaaacagatta
aagacctggtggcagtctgagaatggtatggagaacgtcaccattcagctgaatctggaa
gccgagtttcacttcacacatctcatcatgaccttcagaacgtttcgacctgctgccatg
gtgatcgagcggtcagctgactttgggaagacgtggcaggtttatcgttactttgcctac
gactgtgagtcctcgttcccgtctgtttcccagggtccgatgaagaaggtcgatgatgtc
atctgtgactcacgttattctgacatcgagccatccactgaaggagaggtgattttcaga
gttctggacccagcgttcaggatcgatgatccctacagccccagaatccagaacatgttg
aagatcaccaacctgcgggtaaagttcactaaactgcacacgctcggagacaacctgctg
gactctcggatggagatcaaagagaagtattactacgccatctacgacatggtggtccga
gggaactgcttctgctacggacacgcctctgagtgtgccccgattcagggtgctggccag
accagtgagggcatggttcacggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgcgaacagtgtcaggatttctaccatgacctgccgtggagaccagccgagggacgcaac
accaacgcctgcaaaaagtgtaactgcaaccagcactcagactcgtgtcacttcgacatg
gccgtgttcagggcatcaggaaacgtcagcggaggagtctgtgacgactgtcagcaccac
acgaccggacacaactgtgagcagtgtgaaccgttctactaccaacatccagagagagac
atcagagaccccaacatctgccagccctgtgactgtgaccctgtgggctctctgaatgga
ggaatatgtgatgggatgaccgacgttcgagccggtctgattgctggtcagtgtcgctgt
aaagtcaacgtggagggagaacgctgcgagcgctgcaaacaggcgtattatgggctgagc
gacgaccctgagggctgcaaggcatgtacctgcagccctgtggggacagttcctggagga
aatccctgcgacagtgaaacaggaagttgcttctgtaaacgtctggtgacaggacgagac
tgtgatcagtgtgtgcctgaacactggggtctcagtaatgatatggacggctgcagacca
tgtgactgtgacctgggaggagccatcaacaatcagtgtgatcaggtgactggtcagtgc
gtctgcagagatcacatgttcggtcgacgctgtgatcaggtcgagtctggattctacttc
atcgctctggatcactacacgtacgaggcagaggacgccaaatttggacctggagtgaca
gtggtcccaaggccccaccctctggaccgcagtccgacctggactggtattggtctggtc
aatgtcccagagggggccttcctggagttcactgtggacaacatcccccactccatggag
tacgacatcctcatccgctacgaacctcagctgcctgaccaatgggaggaagttctgatg
acagtgatgagacctggaccaatcacagcagacagccgctgtgtcaacactgtgcccgac
gacgacaaccagatgatctccctccatcccggctcacgatatgtggctcttcccagacca
gtttgttttgaaactggtctgaactacacaatccgcctcagtctgccacggtactcagcc
ctcagtgacgtccagtctccgtatacgctcattgactcgatcgtgttgatgcctcactgt
aagaacatggacatcttcacagcctcagaaggaggagactccaatggaaacagtggttgg
gaaacctttcagcgttatcgttgtcttgagaacagccagagcgtcatcaagtcgccgatg
actgacatctgcaggaactacatttttagcatctctgccatgttgcaccagggagctaaa
gaatgccagtgtgaccctcagggctccctcagcactgtgtgtgatcccaatgggggtcag
tgtcagtgtcgccccaatgttgtcggcaggaactgtgacagatgtgcaccggccacatac
cagtttggacccaacggctgcaaagcgtgtgcatgtgaccctcagggttcacagagttcg
ttctgcaatcagctgactggtcagtgtgtttgtgtttcgggagcgtacagccggcagtgt
gatcgctgtctgcccggtcactggggcttcccctcctgccgaccctgctcctgcaacgga
cacactgacgagtgcgaccccaacactggacgctgcatcagctgcagggaccacaccact
ggacacacctgtgacaggtgtctggatggttactatggtgacccaacgctggggtcaggt
gaccactgtcgtccttgcatgtgtcctgatggccccggcagcctgcggcagttcgcagga
agttgttaccgtggtgacgactcccaacaggctatctgtgtctgcaacactggatacaag
ggtgctcgctgtgatgagtgctcacctggttactatggaaaccccggagagtcaggaggg
cagtgtcagccctgtcagtgcaacaacaacatcgacatgttggacccggactcctgcgac
gccagaaccggcgagtgtctgcgttgcctttaccacagcgagggcgcctcctgccagctc
tgcaagctgggttactacggcaacgcattgcagcaggactgtaggaaatgtgtttgtaac
aagctgggcagcgaaaactccagctgtccgtcatccggcgactgtcactgcgaccgcagc
agcggtcagtgtcagtgcctgcccaacgtgattggtcaacactgcgaccgctgcgcacct
gacacctggaacatggcgagcggccacggctgtcagacctgcaactgcaaccccaaacac
tcttacgggatgtcctgcaacgagatcagcggtcattgttcctgtcagccgggcttcgga
ggaaggacatgcagcgagtgtaaagaactgttctggggagacccagaggtcaaatgtcac
gcatgcgactgcgaccctcaagggatctcagagcagcagtgtaacaaagccaacggtcac
tgcgtctgtgtggaaggcgtttctgggccacgctgcgacacctgtgcccgtgggttctcc
ggtaccttccctgactgccaacgctgccaccagtgctttgctgaatgggatgaggtcatc
ggtcagctgaccaatcagacacaccgccttgtcaacaaggtcaacgccatcaaagccaac
ggagtcagtggaccgtacaggaaatctattgacagcatggaaaagagcgtcgccgacatc
agagtcatcctgaaccagaatccagcttcacagccgctgtcggagatccaggagctgctg
cagcaggccagtgacctgatgggggctctaagccagatgttgaaccgcaccgaagagacg
ctgatccaggtggaggacgaggacgcagctgcaggaaccaaactggactctttgatgtcg
gacactcagaaactggagaggacggtccaggagctgttggatcaggtcgagttcatcaag
aactctgacatcagaggggcgaccaacagtgtcactaagtacttcctgcaatctcaggcg
gctgaagctcgagcaaacgcctccactgtcgaccccgacagccccgtagaaaactccagc
accctacggcaactcacagaggacaaaatgaaccaaaccagagaggagttccagaggagg
cacactgagtatgctcagagactggacgacctggcaggagagctgcagactctagaccta
tcagagatcagccacaagacctgtggcagtccatcatcaggtcaggattcgtgttcgtcc
tctccctgtggaggtcttggctgtgtggactctgagggtcgaaccaaatgtggaggtgaa
ggatgtgacggtgttgtgacgactgcccacaacgcctggaaaaaggcccaagactctgaa
caggaaatcattagtgccatggaggaagtggagaagctctccaaaatggtgtcggaggcc
aaactgaaggcggacgaggcgaagctgagcgctcaggacgtcctgatgaagaccaacaga
accaaacagaaagtccagcagagcaacgaggagctgagaggtctcatcaaacagatcaga
gacttcctcacacaggacgctgcagacctggagagcgttgagctggtggctaacgaggtt
ctggccatgcagatgccaactacaccggctcagctgcagaacctgaccgacgagatccga
cagaaggtgggagaactgggaaacgtggagaccatcctgcagcagagcgccgacgacatc
cagagagctgagaacctgctggagcaggcccgccgaaccagtgaggaggcatcaaacgtg
aaggactctgcagagaaggtgaaacaagctctggaagaagctaagagagctcagaccgcc
gccagcagcgccatccagcaggctaccgccgacatccagaacaccaacaacctgctgtcg
tctgtgacctcggagacggcagatgcggagctgaagctggctaacgccacccaaaggctg
cagagtctcgagcaggacgtaaccctgctgagagacaaaggtgtgaacatcaccgtgagc
accaaacgaaccaatgaggatgcagcgaccatcagaaagatcgcagaggaggtcaagaaa
gacctagactccgagctgaagaataagtactccacagtggaggagcttatcggtacaaag
gcagggggcctagcggacgcaaagaagagggcggagtcactgcagcaggaagccaaagat
ctgctgctgaaggccagcaacaaactgcagctgctcaaagatctggagaaatcttatgaa
gacaaccagcggactctggaggtgaaggcggagcagctggtggagttggaggcggctgtg
aaggagctgcttcaggagatcagccacaaggtcaccatctacagcacctgtgtgttctaa
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