Epinephelus fuscoguttatus (brown-marbled grouper): 125887996
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Entry
125887996 CDS
T08419
Symbol
itga11b
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125887996 (itga11b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125887996 (itga11b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125887996 (itga11b)
04810 Regulation of actin cytoskeleton
125887996 (itga11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125887996 (itga11b)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin alpha subunits
125887996 (itga11b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
HisK_sensor
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
125887996
NCBI-ProteinID:
XP_049431111
LinkDB
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Position
LG4:39638847..39701760
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AA seq
1201 aa
AA seq
DB search
MDYYHLLLLLLSTCSFLPDLQLCFNFDTKNFKIFYGSKENQFGYTVQQHEVGGRQWLLVG
APFESTGKQQTGDVFKCPLDTRSSANCTRLNLGKLSLDNVSERKDNMRLGMTLTSNPKDN
SFVTCGPLWSHECGSSLYSTGICSKVSRNFKLSHTIAPALQRCETLMDIVIVLDGSNSIY
PWYEVQDFLITILQKFYIGPGQTQVGVVQYGSTVVHEFGLGEYQTVDEVVEAARGIDQRG
GEETRTALGINVARSEAFNRGGRPGAKKVMIVITDGESHDSPQLVQVVADSEKDNITMYA
IAVLGYYNRRGINPEAFLKEIKFIASDPDEKHFFNVSDESALKDIVDALGERIFSLEGTS
SQGRGFGLQMAQAGFSSHLVKDGILLGAVGAYDWNGAVLKETKHGKVVPPKFSYKDEFPD
ELKNHGAYLGYSVGSLISSRGSQLYVSGAPRFNHTGKVIVFTLKNTGNLTILQALLGEQI
GSYFGSELLSMDVDSDGQTDILLVAAPMFCSQGWERGKVYIYTVTPQTSLILQGALEVSD
RSQNSRLGSAMAQIPDMNGDGFRELVVGAPLEDDHQGAVYVYYGQDKTIQRQYRQRLSAA
GFSAGLKYFGQSLHGVLDVNADGLVDLAVGALGAAVIVWSRGVVRIQAKLTFEPEKVNIF
NKDCLRGGKEVTCMSVIVCLSLESRTKSKTKSRTDVAVWYSLVLDERRFPPRAVLDESGR
QQPRSLSLQVGGQSCQRLGFSIQETTDYGRPIAVVLETGLKSLDEGPVLDPDWPSVLRAE
LPFWNGCEQEDTCVPDLILYSHTDLLDVQQFCSSRERAVWSICSHQGASEGSVYVMEAGR
RRMVVFARLENQGENAYGAAIHISTSSNLLFSSLIVKDQSDIQIECYAEDRLAIQRNCNI
SAPFMKSLAQVSFRLEFEFSRTVFLDHVRVVMTTSSEGEEGYPDDNINDIFLPLKYQTDL
LFTRDPNPPRFEIRADSSSSSSSSSSWDHTDSSSPNFNLTYHIQNLGMFSVQDVLFRADV
WAVTRQGNQLVNITEYSIEQVAGSDCVLPQPRSTNQVTAEDLSHLSQLNHSNSVSVTVQC
RLNLPASREVKVTLSGQLQIPALLTVNFRSLELLTEASIQLEASSHMFLQEERPVREIIL
ELRKDEDYTVPVWIILGSSLGGLLLLALLVLALWKLGFFNRRRRQEEEEQPVANGKAAEE
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggattattatcatcttcttcttctgctgctgtcgacctgcagcttcctgccagatctt
cagctctgcttcaactttgacacaaagaacttcaagatcttctatgggtctaaagaaaac
cagtttggttacacagtccagcagcacgaggtgggaggacgccagtggttgctggttggc
gctccctttgaatccacagggaagcagcagactggtgatgtgttcaagtgtcctctggac
accagaagctctgcaaactgcaccagactcaacctggggaaactttctctggacaacgtg
tctgagagaaaagacaacatgaggctgggaatgacgctgacctccaacccaaaagacaac
agctttgtgacctgtggtccactctggtctcatgaatgtggaagctccctgtacagcaca
ggaatctgctccaaagtcagccgaaacttcaaactgtcccacaccatcgcacccgccctg
cagaggtgtgagaccctcatggacattgtgatcgttctggatggttctaactccatctac
ccatggtacgaggtccaggacttcctcatcaccatcctgcagaaattctacatcggccca
ggtcagacgcaggtgggtgtggttcagtatggctcaacggtggtccacgagttcggcttg
ggtgagtaccagacggtagacgaggtggtggaggccgccagaggcattgaccagcggggt
ggcgaggagacgaggacggcactgggcatcaatgtggcgcggtcagaggcgttcaatcgc
ggcggtcgtcctggtgctaagaaggtgatgatcgtgatcacagatggagaatctcatgac
agcccacagctagtgcaggtcgtcgcagacagcgagaaagacaacatcaccatgtacgcc
atcgctgttctgggttattacaaccgtcggggaatcaaccctgaagcctttctgaaggaa
atcaaattcatagcgagtgacccagatgagaagcacttcttcaacgtgtcagatgagtca
gcactgaaggacatcgtggacgcgctgggagagaggattttctctctggaaggaaccagc
agtcagggtcgagggtttggtctgcagatggctcaggctggtttctcctcacatttagtc
aaagacggtattctgctcggggcggtgggagcctacgactggaacggtgctgtgctgaaa
gagactaaacacgggaaagttgttccaccaaagttctcctataaggacgagtttccagac
gagctgaagaaccatggagcctatctgggttactcggtgggttcactcatttcatctcgc
ggctctcagctctacgtgtccggagctccaaggttcaaccacacagggaaggtcattgtg
ttcaccctgaagaacactggaaacctgaccatcctgcaggccctgctgggagaacagatc
ggctcatattttggcagcgagttgttatcaatggacgtagacagtgacggacagacggac
atactgctcgtggcagcgcccatgttctgcagtcaaggctgggaaagagggaaggtctac
atctacactgtcacaccacagacatcattgatcctgcagggggcgctggaggtctctgac
cgctctcagaactcccggttgggatcagcgatggcccagatacccgacatgaacggggac
gggttcagggagctggtggtgggagcgccgctagaggacgaccaccagggggcggtgtac
gtatattacggccaggacaaaaccatccaacgccagtacagacagcgtctgtctgcagcc
ggtttctctgctggtctgaagtatttcggtcaaagtcttcacggtgttctggatgtcaat
gcagacggacttgtcgacctcgcagtgggagcactgggagctgcagtcattgtctggtct
cgtggtgtggtgcggattcaggccaagctgacctttgaaccggagaaggtcaacatcttt
aacaaagactgtctgcgaggagggaaggaggtcacctgcatgtccgttatcgtttgtctg
agtctggagtccaggacgaagagcaagacaaagtccaggacagatgtcgctgtgtggtac
agcctggtgctggatgagaggcgatttcctccccgagctgttctggacgaatcaggtcga
cagcagcccaggagtctgtctctacaggttggaggtcagagctgccagcgcctcgggttc
tccattcaggagacgactgattatggacgtcccatcgcggttgtcctggagacggggttg
aaaagtctagatgaggggccggtgttggaccctgactggccgagtgtcctgagggccgag
cttcctttctggaacggctgcgagcaggaagatacctgtgttcccgacctcatcctctac
agtcacactgacctcctggatgttcagcagttctgcagctcgagggagcgggcggtttgg
tcgatctgcagccaccagggggcgtcagagggctcggtgtacgtgatggaggctgggcgg
agaaggatggtggtgtttgctcgactggagaatcagggagagaacgcgtatggcgccgcc
atccacatctccacctcctccaacctccttttttccagtctcattgtcaaggaccaatca
gatattcagattgagtgttacgctgaggacagactggccattcagaggaactgtaacatc
agcgctccattcatgaagtccttggctcaggtatctttccgtctggagtttgaattcagc
cgcactgtcttcctggatcacgtacgggttgtcatgacgaccagcagtgagggggaggag
ggatacccagacgacaacatcaatgacatcttcctccctctgaagtaccaaactgacctc
ctcttcaccagagacccaaaccctcctcgctttgaaatcagagccgacagctcctcttcg
tcctcctcctcttcctcctgggaccacacagacagcagctcccccaacttcaacctcact
tatcatatccagaacctgggcatgttttctgtgcaggacgtcctgttcagggctgatgtc
tgggctgtgaccaggcaggggaaccagctggttaacatcacagagtacagcatcgagcag
gtagctgggtctgactgtgtgctgcctcaacccagatcaaccaatcaggttacagctgag
gacctgtcgcacctgtcacagctgaaccacagtaacagtgtgagtgtgacggtccagtgc
agactgaaccttccggcctccagagaggtgaaagtgacactcagcggacaacttcaaatc
cctgctctgctcactgtgaacttcaggtcgttggagttactgactgaggcctccatccag
ctggaagcgtccagccacatgttcctgcaggaggaaagacctgtcagagagataatcctg
gagttgaggaaggacgaggattacaccgtccccgtctggattatactggggagctcactg
ggaggcctgctgctactggccctactggtcctggccctgtggaagctcggcttcttcaac
agacggaggagacaggaagaggaggagcagcctgtagccaatgggaaggcagcagaggag
ctataa
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