Epinephelus fuscoguttatus (brown-marbled grouper): 125888203
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Entry
125888203 CDS
T08419
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efo03016
]
125888203 (tsen2)
Enzymes [BR:
efo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125888203 (tsen2)
Transfer RNA biogenesis [BR:
efo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125888203 (tsen2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
125888203
NCBI-ProteinID:
XP_049431377
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All DBs
Position
LG1:complement(3971348..3999942)
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AA seq
454 aa
AA seq
DB search
MQAEFRAPRRRTRVQEEYEAPLPMSRSLEEASHFRAELINQHVLVCHPDHIQKIHNQGYF
GKGILSRSRPDHSISDQWEHHAGLFLPVISQSRYDELLRWAGAALSAQGLDEAAVNQTLL
SLSQPVEIAEMRREVGGGLEDGQKGAEPGPEGGACPYTKRQRPCSEVEPEAKRSCRLNPR
DLNLDHSTDPSSDQDLDPDPDSGPDSDSDPGPGPGSDSDPGPGPDSDSDSDPGPGPGPGP
GPGPGSDSGPLVPGPGFVLVVSDSEVCGEVRQVRQSPVSVSEYLQLSLEEAFFLVYSLGC
LSVYLHQEPLSVLQLWRKFRSLRPDFVSSFSAYQHCRSRGWIPKGGGGAKYGVDFMLYRK
GPPFYHASYSVVVERVDDAFRGSALRPFSWRSLAALSRITSNVSKELMLCYIIYPADQSE
AELDSPVCLSRLKVQEVIVSRWVSSRERAEQEDF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagtttcgggctccgcggagacgcacgcgggtgcaggaggagtacgaggct
ccgctaccgatgagccgcagcctggaggaggcgagccacttccgggcggagctcatcaac
caacacgtgctggtctgtcacccggaccacatccagaagatccacaaccagggttacttc
ggtaaaggcatcctgtccagatccagaccggaccacagcatctctgaccaatgggagcat
catgcaggtctgtttctgcctgtcatctcacagtccaggtatgatgagctcctcaggtgg
gcgggtgcggctctctctgctcagggattggatgaagcagctgtcaatcaaaccctgctc
agcctctctcagccagtagaaatagcagaaatgaggagggaggtggggggagggttggag
gatggacagaagggggcggagccaggaccagagggtggagcctgtccctacacaaagagg
cagcggccgtgttcagaggtggagcctgaggcgaagaggagctgcaggttgaacccacga
gacctgaacctggaccacagtacagatcccagctcagaccaggaccttgatcctgatcct
gactctggccctgactctgactctgatcctggtcctggtcctggttctgactctgatcct
ggtcctggtcctgactctgactctgactctgatcctggtcctggtcccggtcctggtccc
ggtcctggtcctggctctgattctggtcctttggttccaggtcctggttttgtcctggtg
gtctctgacagtgaggtgtgcggggaggtccgacaggtgcggcagtctcctgtctccgtc
tcagagtacctgcagctcagtctggaggaggccttcttcctggtctacagtttgggctgt
ctgtctgtctacctgcaccaggagccgctgtcagtcctccagctgtggaggaagttccgt
tccctgaggcccgactttgtcagctcgttctcagcctatcagcactgtcgaagcaggggg
tggatcccaaaaggagggggtggggccaagtatggcgtcgacttcatgttgtacaggaag
ggaccgccgttctaccacgccagttattcagtggtagttgaacgggttgatgatgcgttc
aggggctctgcgttgcgtccgttttcgtggcgttctctagcggctcttagcaggatcacc
tccaacgtctccaaggaactgatgttgtgttacatcatctatccagccgaccaatcagaa
gccgagctagactcacctgtctgtctgagcaggctgaaggttcaggaagtgatcgttagc
aggtgggtttcctccagagagcgagctgagcaggaagacttctga
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