Epinephelus fuscoguttatus (brown-marbled grouper): 125888250
Help
Entry
125888250 CDS
T08419
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125888250 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
efo01007
]
125888250 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efo03016
]
125888250 (farsb)
Enzymes [BR:
efo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125888250 (farsb)
Amino acid related enzymes [BR:
efo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125888250 (farsb)
Transfer RNA biogenesis [BR:
efo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125888250 (farsb)
Prokaryotic type
125888250 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
125888250
NCBI-ProteinID:
XP_049431445
LinkDB
All DBs
Position
LG5:6761115..6780186
Genome browser
AA seq
842 aa
AA seq
DB search
MPTVGVKRDLLFTALGRTYTDEEFDELCFEFGLELDEITSEKEIISREQGDTKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPVSGKLQRLIITKETAAVRP
HAVAAVLRDITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DICFKPLNQTKEYTATELMSLYKADSHLKHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHTKISIQTKNVFIECTATDLTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPGGKTIKY
PELAYRTEKLNGEFVNRKVGINESTEKIAQLLTKMCLRSKATGVGDEIEVEIPPTRPDVI
HACDIMEDAAMAYGFNNITRTTPRTYTVASQFPLNKLTELLRQDLAAAGFTEALNFALCS
IEDVADKLGKKISETRAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVLKDENKDVGARNSRRFCAVYYNKSPGFEVIHGLMDRVMQLLEVKPARGDGYHIQAADD
STFFPGRCAEIFVRGKSVGRLGVLHPDVINRFELTMPCSAVEMDIEPFLGHTAETTLTHD
VPMQEVIKHKFPTQDESLQARPTSTKTVLGDMSTTAGLKALNDFLADKSYMEGYAASQAD
TAMFDAIPSSPSSTFCHVMRWYKHIKSFQRERASLPAAKSQFVLPAATNTTSDDDDDIDL
FGSDDEAESAEAERIKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVR
SVSMDGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEESITAFEEYVQSVDVAAFN
KI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaaaagagatcttctcttcacagctttgggcagaacatacacc
gatgaagagtttgacgagctgtgctttgaatttgggctggagctggatgagattacctca
gagaaggagataatcagccgagagcagggcgacaccaaggcatcaggagcgtctgacgtc
atcctgtacaagatcgatgtaccagctaaccgctatgacctgctctgtctggaggggctg
gtccgtggcctgcaggtcttcaagaacaagttggaggcacctcgctacagacgtgtcagc
ccagtcagcgggaagcttcagaggctgattatcacgaaggagacggcggcagtgcgaccc
cacgctgtggcagcagtgttgagggacatcaccttcacgcaggagcgctacgacagcttc
atcgagctgcaggagaaactccaccaaaacatctgcaggaagaggagcctggtggccatc
gggacccacgacctcgacaccatctctggtcccttcacatacacagccaaacctccagga
gacatctgcttcaaacccctcaaccagaccaaagagtacacggccaccgagctcatgagc
ctctacaaggcagacagccacctgaagcattaccttcacattattgaggacaagcctgtg
taccctgtcatctacgacagcaatggcatcgtcctgtccatgccgcccatcatcaatggt
gaccacacaaaaatctccatacagacaaagaacgtctttatcgagtgcacggccacagac
ctgaccaaggcaaagatcgtgctggacatgatggtgaccatgttcagcgagtactgttca
cagcctttcacggtggaggaggctgaggtggtgtacccaggtggcaagaccatcaaatac
ccggagctggcttacaggacggagaagttgaacggcgagtttgtcaaccgaaaagttggc
atcaatgagtcgactgagaaaatcgcccagctgctgaccaagatgtgtctgcgctccaag
gctacaggtgtcggcgacgagatcgaggttgagatcccgcccacgcgcccagacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcctacggattcaacaacatcacgcgc
accacgccgcgcacctacactgttgccagccagttccctctgaataaactgacagagctg
ttgagacaagacctggcagcagctggattcacagaggccctcaactttgccctatgttct
atagaagatgtggcagacaagcttggaaagaagatctcagagacgagggcggttcatatc
tccaaccccaagaccgctgagttccaggtggcgcgcaccactttgctgccaggcctgctg
aaaaccatagctgccaacaggaagatgccccttcccctcaaactgtttgagatctctgac
gtggtgctgaaggatgagaataaagatgttggggcgcggaacagccggcgtttctgtgcc
gtctactacaacaagagtccaggcttcgaggtgatccacggcctgatggaccgagtcatg
caactgctggaggtgaagccagcccgaggggacggctaccacatccaggctgcagacgat
tccacctttttccccggtcgctgcgcagagatcttcgtccgtggaaagagcgtagggcgg
ctcggggtcctccacccggacgtcatcaaccgcttcgagctgaccatgccctgctcggct
gtggagatggacatcgagcccttccttggccacactgctgaaaccaccctcacacacgac
gtccccatgcaggaagtcatcaagcacaagtttcccacgcaagacgaatccttgcaggcc
cgtccaacttccacaaaaactgtgcttggcgacatgagcacgacagccggcctcaaagct
ctcaatgacttcctggcagacaagagctacatggagggctatgcggcgtcgcaggcggac
acggcaatgttcgacgccatcccctcctctccctcctcgaccttctgccacgtcatgcgc
tggtataaacacatcaagtccttccaaagggaaagagccagcctcccagcagctaagagt
cagtttgtcctcccagccgcgacaaacaccaccagcgacgacgacgacgacatcgatcta
tttggctcggacgacgaggccgagagcgcggaggcggagagaatcaaggagcagcgcctc
gccgagtacgccgccaagaagtccaagaagccagctctcatcgccaagtcctccatcctg
cttgacgtcaagccctgggacgacgagacggacatggccaagctggaggagtgcgttcgc
agtgtcagtatggacgggctgctgtgggggcagtccaagctggtcccggtgggctacggc
atcaagaagctccagataggatgcgtggtggaggatgataaagtgggcacagatctgctg
gaggaatccatcaccgccttcgaggaatatgttcagtctgtggacgtggctgccttcaat
aagatctga
DBGET
integrated database retrieval system
