Epinephelus fuscoguttatus (brown-marbled grouper): 125888320
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Entry
125888320 CDS
T08419
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
efo04514
Cell adhesion molecule (CAM) interaction
efo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125888320 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125888320 (ncam1b)
04517 IgSF CAM signaling
125888320 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125888320 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125888320 (ncam1b)
04090 CD molecules [BR:
efo04090
]
125888320 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125888320 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
efo00537
]
125888320 (ncam1b)
04091 Lectins [BR:
efo04091
]
125888320 (ncam1b)
Membrane trafficking [BR:
efo04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
125888320 (ncam1b)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
NCAM1/2
125888320 (ncam1b)
CD molecules [BR:
efo04090
]
Proteins
125888320 (ncam1b)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
125888320 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
efo00537
]
Others
125888320 (ncam1b)
Lectins [BR:
efo04091
]
I-type lectins (Siglecs)
125888320 (ncam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
V-set_CD47
Pur_ac_phosph_N
C2-set_2
Ig_PDGFR_d4
C1-set
Fn3_ROS1
Adeno_E3_CR1
C2-set_3
C2-set
Motif
Other DBs
NCBI-GeneID:
125888320
NCBI-ProteinID:
XP_049431545
LinkDB
All DBs
Position
LG5:27723678..27824400
Genome browser
AA seq
1230 aa
AA seq
DB search
MVQLRDIFLALCLVGCTVSLEVQITPSHGEISLGESKFFMCEVVGVARHIDWFGPSGDRI
EPNRPDITVTRNDESSSTLTLYKAGTENAGTYKCVATNGDQQGESTVKVKIFQKITFTNA
PSPQEFTEGDNADIICDVVSSPPPTVLWKYKGARIQMEKDVRFKVLSNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVGQPAMLTCAVDGYPEP
MVTWTRNEVVLEAGEKYSFNDDGSEMTLMDVTKLDEGDYTCIARNKAGESEQELSLRVFV
KPKITYIVNQSISEMEEQVTLTCEASGDPTPTISWSAGERVFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVKYTDAGQYLCTARSAIGEDDKLAYLEVRYTPKI
HGAVAVYTWEGNAVNISCEVMAHPSDVSIIWLRDGLQLPNSNTTNIKIFRSPSASYLQIT
PESENDFGSYNCTASNEMGTEAKEFLLIPAEVPSAPSISEVRPFSTTAQIQFEEPESTGG
VPVLKYRAEWRAQGRGGWVHRVYDVQDGYTSEATITGLKPDTSYEVKLSAINGKGEGESS
PAEFFKTEPVRNPNPPKLQGALQPKGNSLKVSWIKQDDGGSPILHYLVRFKPVQVSEWKP
EIRLPSVSEYVILSGLDWDTEYNVNVVAENQKGKSEPATMSFRTATEPEAIPDLGDEAAL
SMGIMLWAGILVVVFVLLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNLEEGKAAFMK
DESKEPIVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAFTAALALDTLSSVATNSDT
ATATNDPAQDSPSSETTTLTCSLSTPANDPSPTPVLAPAPTPESNTAPSTPLISTSAVEA
KMAPLVEQRGSNTPEEPEKITTPPCTPERTKAQKSGTPIPPKRRHSPKLAAEKAKASPPV
SPLAAPSSSSSPIPETKKPAPRPPVNKLPIQSHTVALDTETPVQTASALATTALPKPDPD
SNTAVPDPSGCSLTAFDTNNKPADQTVDDNTAKDAATSSPPVIHGALKVLDAEEHAPLVA
NVPSPLPVTAISSPPAPASVEAPVSNDLLTTPPDMYDFLNLNVVPRNADLELELTNGTKR
ASQIPADLISLESPPSAPSLPNGDGADLPPSGPVLEASETLAKTAPPVNDEKIFSDEKGK
LGEAELSNAMTEISAEHNSIIQTKTSESKA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggtccagttgagggatattttcctagccttgtgtctcgtgggctgtacagtgtcactg
gaagtgcagatcacaccaagtcatggtgagattagtcttggagagtccaaattcttcatg
tgtgaagttgtaggcgttgccaggcacatagactggttcggaccaagtggggacaggata
gaaccgaacagaccagacataacagtaacccgtaacgatgagtcatcctccaccctcaca
ctttataaagctgggactgaaaatgcagggacatacaagtgtgtcgcaactaatggagac
cagcaaggggagtcaaccgtcaaagtgaaaatctttcaaaaaatcaccttcacaaatgca
ccctcgccccaggagtttacagagggagacaatgctgacattatttgtgacgtcgtcagt
tcccccccacctactgtcctctggaaatataaaggagcaagaatacagatggaaaaagat
gttcgctttaaggtactgagcaacaatcaccttcaaatccgtggcataaagaagacagat
gagggctcgtatacctgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgttgtgaacgtgctcccgaccatcagggtatggcagtcagaagtgaatgcc
acagcagatgtcgggcagcctgccatgttgacttgtgctgtggatggctatcctgaaccc
atggtgacatggacaaggaacgaagtggttctcgaggcaggagagaagtacagctttaat
gatgatggctctgaaatgacattaatggatgttaccaaactggatgagggcgactacacc
tgcattgccaggaacaaggctggggagagtgagcaggagctcagtctgagagtgtttgtc
aaacctaagatcacgtacatcgtaaaccagagcatttccgagatggaggagcaggtaacg
ctgacttgtgaggcgtcaggagatccaacgcccaccatcagctggagcgccggtgagcgc
gtcttcaccgaaggagagcaggcacatctaaacaggatctatcaggcatcgtggactcgg
ccagaacaacacaagagtctggatggaaatgtagtggtaaggagtgatgctcgtgtgtcc
tccctcactctgaagtatgtcaagtatacagacgcgggtcagtacctctgcacggcacgc
agcgccattggagaggatgataagctggcatatctggaggtccgctatacccctaagatc
cacggtgcagtggcagtgtacacctgggagggaaatgctgttaatatcagctgtgaggtc
atggctcatcccagtgatgtatctattatatggctgagagatggactgcagctccccaac
tcaaacactaccaacatcaagatcttccggagtccatcagccagctacctgcagataacc
cccgagtctgaaaatgactttgggagctataactgcactgcttcaaatgagatgggcact
gaggccaaggagttcctgctcattccggccgaggtgccatcagctccatccatcagtgag
gtgagacccttctccaccacggcacagattcagttcgaggagccagaatccaccggaggt
gttcctgtcttgaaatacagagcagagtggagggctcagggcaggggcggctgggtgcac
cgagtctatgatgtccaagatggctacaccagcgaagcgaccatcacaggcctgaagcca
gataccagctacgaagtgaagttgtcagccatcaacggcaagggtgaaggtgaaagcagc
cccgctgagttcttcaagacggagcctgtccggaatccgaatcctcctaaactccaaggg
gctcttcaacccaaaggcaactccctcaaagtcagctggatcaagcaggacgatggtggc
tcgcccattttacattatcttgtccgcttcaaaccagtacaggtgtccgagtggaaacca
gaaatccggctgcccagcgtcagcgagtatgtgattctcagcggtttggattgggacacc
gagtacaatgttaatgtggtggcagagaatcagaagggcaagtcagagccagctaccatg
tccttcaggacggccacagagccagaggccatcccagatttgggtgatgaggcagcgctc
tccatgggcatcatgctctgggcagggatccttgttgttgtatttgtactcctgctgcta
gctgtggatgtcacctgttactttgtcaacaaatgtggcctcatcatgtgcctctgcggt
aaatcaggcacagggaccaaagggcacaacttggaggagggcaaggcagccttcatgaaa
gatgagtccaaagagccaatagtggaagtcagaacagaggacgaatgcacagccaatcat
aatgcagcaggaccgacagaacccaatgaaaccacacctctcacggagccagagctggcg
gctttcactgctgctctggcactggacaccctctcctccgtagccaccaactctgacaca
gccactgcaacaaacgatcccgctcaggacagcccctctagcgagaccactaccctcact
tgtagcctgtctaccccggccaacgacccctcacccacccctgtcctggccccggccccg
actccagagtcgaacacggccccgtcgactcccctcatctccacttctgccgttgaagct
aaaatggccccattagtagaacaaagaggaagtaacaccccagaagaaccggagaaaata
accactcctccttgcacccctgaacggactaaagctcaaaaatctgggacaccaatacca
ccgaagcgtagacattctcctaagcttgccgctgagaaagctaaagctagcccacctgta
tctccactggctgcgccttcctcatcatcctctcccattcctgagaccaagaaacctgct
ccaaggccaccggtcaacaagcttcccatacagtcacacactgtagccttagacaccgag
acgccagtacagactgcctctgctctagcaaccactgcccttccaaaaccagaccctgat
tcaaatacagctgtcccagatcccagtgggtgtagtcttactgcctttgacactaataat
aaacctgctgatcaaactgttgatgataacactgccaaagatgctgcaaccagctctccc
ccagtgatccacggtgctcttaaagtcctggatgctgaagaacatgctcctctagttgca
aacgtcccctctcctttacctgttactgctatttcctctcctcctgcacccgccagtgtt
gaggcgccggtttcaaatgatctcctcacaacgccgccagacatgtacgactttctaaac
ctaaatgtagtgcccagaaatgcggatttagagttagagctgacaaacgggacgaaaaga
gcctcccaaatccccgcagaccttattagtttagagagcccgccctctgccccctctctg
cccaatggagacggagcagacctccccccctcaggcccagttctggaggcgtcagagact
ctggccaagactgctcctcctgtcaacgatgagaagattttttctgatgagaaaggcaaa
ctgggggaggcagagttatcaaacgccatgacggagatctctgcagaacacaacagtatc
atacagacaaaaacctccgagagcaaagcatga
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integrated database retrieval system
