Epinephelus fuscoguttatus (brown-marbled grouper): 125888349
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Entry
125888349 CDS
T08419
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04020
Calcium signaling pathway
efo04510
Focal adhesion
efo04540
Gap junction
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125888349 (pdgfd)
04020 Calcium signaling pathway
125888349 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125888349 (pdgfd)
04540 Gap junction
125888349 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125888349 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
efo04052
]
125888349 (pdgfd)
Cytokines and neuropeptides [BR:
efo04052
]
Cytokines
Growth factors (RTK binding)
125888349 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
125888349
NCBI-ProteinID:
XP_049431609
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All DBs
Position
LG5:complement(17608724..17690441)
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AA seq
377 aa
AA seq
DB search
MSGPVVFQMWMVLLLGTITGVARAQVSTAKVMRGNIRRDDSNRLTTDLYRKEENITVTPV
GGAIHSPRYPNAYPRNLLLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQS
ETSTIIWGRWCGQKAPPSLNSKTNLLRVTFKSDDYFVAKPGFKVYYSLLYDSPLPASNTN
WEAVTMPMSDSVVGQMPVTVTQVPFSLEDLDRTIAAFDTVEQLFRSLSPDTWRQDLDSIY
TQTHIHYRSRAYHLASRHNKVDLNRLYDDVKRYSCTPRNYSVNLREEVRVTNAVFFPRCL
LVKRCGGNCGCGTENWNNGCICQASKTTLKLHEVLKYSPEVTLHQRHRRTRVRWIIDELF
LTHHEKCECACPSQPPR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccggtggttttccagatgtggatggttttattgttggggactataacaggg
gtcgcgagggctcaggtctctactgccaaagtgatgaggggcaacatcaggagagacgac
agcaatcgcctcaccacagacttgtaccgcaaggaggaaaacatcacagtcacgcccgtg
ggtggagccatccacagcccacgctaccccaacgcttacccccgcaatctgctgttgtca
tggaaactgctgtcgccaccagggagccgcattcacctggagtttgacggacacttcggt
ctggaggaggctgagaatggagtgtgcaggtatgactttgtggaagtggaggaccaatcc
gagaccagcactataatttggggtcgctggtgtgggcagaaggcaccgcctagtctcaac
tccaaaaccaacctgctcagagtcaccttcaagtctgacgattactttgttgcaaagcca
ggattcaaagtctactactcactgctgtacgactctcctctgcctgcatccaacaccaac
tgggaggctgtcaccatgcccatgtcggacagtgttgtagggcagatgccagtcacagtc
acacaggttccgttctcactggaggatttggaccggaccatagctgcctttgacactgtg
gaacagctcttcagatccctgagcccagacacctggagacaggacctggacagcatctac
actcaaacacacatacattacagatccagggcctatcacctggcaagcagacataataaa
gttgatctgaaccgtctctatgacgacgtcaagcggtacagctgcacgcctcgcaactac
tctgtgaacctgcgcgaggaggtgagggtcaccaatgccgtcttcttcccgcgatgtctg
ctggtcaaacgctgtggaggcaactgcggctgcggaacagagaactggaacaacgggtgc
atctgccaggcctccaagacgacactcaaactacatgaggtgctgaaatactccccagag
gtcactctgcatcagcgccatcggaggacgcgggtgcgctggatcatagacgagctcttc
ctcacacaccatgaaaagtgcgagtgtgcgtgtccctcccagccccctcgctga
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