Epinephelus fuscoguttatus (brown-marbled grouper): 125888607
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Entry
125888607 CDS
T08419
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04270
Vascular smooth muscle contraction
efo04625
C-type lectin receptor signaling pathway
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125888607 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125888607 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125888607 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125888607 (arhgef12a)
Membrane trafficking [BR:
efo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125888607 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
HEPN_AbiU2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
125888607
NCBI-ProteinID:
XP_049432005
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All DBs
Position
LG5:complement(21452831..21498602)
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AA seq
1441 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSSTQSPWDENSSVCSQRVDMLQKMLSKEQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFETEHTPSKGDNSTDLSWSSTPIS
RGFGPGSPENLYSRESSCPSPKSTPRNSFNSCHSPEGEDATDLDSLSPTTVSSPSSSRLV
SQIIGAEDDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYA
DFYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDRRRTELIPEEINRQHVQT
LQDSLLPDIQKNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIITKIE
DILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKE
GEEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGASDHMEAGRLRG
SQSSEGSELTHSMSLNTSSPNSATYSSDTSRDTDMGGTPTSGPSRLSDGLQSDTLDGLSY
PASHFDLYSLDQLQEDDRESDRVHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNWQ
QLVGREVLAGLRPQEIKRQEVINELFYTERAHVRMLKVLDHIFYQKLSKEAILPPADIKN
IFTNLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCSN
QPFALEIIKSKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMLRLTKYPLLLDNIAKY
TDNAAEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNAMILEL
KNLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTA
DTKQIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQR
ADAMKVKPHSVIPLPQTDGERDGVEIITTGVSRLSRDPDRTSTGSTQSTDKESSPAPRSV
TQSSLPGNNPFEGVKAEEEEEEEGFVDPEPPYQVAEDGKEGDSFNMFPSRADEALKTLAA
LKQVLVTQLMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARVMVHNGSEKNNSQTEDPTQ
DLGSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGINL
RFSSTSQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRPERPAADTDGSKDK
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgataggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatcg
ggctcctatgtggccctcacagtgttggggcggcctccagggctcgcccagatccctttg
tctgaagcagagtctgaaatgttgggtgttagcatttcatcacctaactccccagcagca
gaacgcccctacagtcccctggaccgactctcctccacacaatcaccatgggatgagaat
agcagtgtctgcagccagagggttgacatgttgcaaaagatgctctcaaaagagcagcag
gagctgcaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatgtttgagacagag
cacactccctctaagggagacaacagtacagacctgtcctggagcagcactcctatatcg
cgtgggtttggacctggatctccagagaatctttactcaagagagtcatcctgtcccagc
ccaaagagcacacccaggaacagcttcaactcctgccactctccagagggggaggatgcc
actgacctggactctctgtcccctaccacagtcagcagtccctcttcctcccgcctcgtc
tcacaaatcattggagctgaggacgactattttgattcagaccaggagcagacaaatggc
cagtgtaacagctttaacagtattgagcagctcaagtctcgtcctgcccacctcgcagcc
ttccttcaccatgtcatctctcagttcgaccctgctcctgtgctgtgctacctctatgct
gacttctataagcagaccaactccaaagagaccagacgggtgttcatggatctccacacc
ttcttcattgaccgtggagcgaatttaaaagttgctgttcctgaatccatctctactgat
ctcgaccggcggcggacagagctgatcccagaggaaataaacaggcaacatgtacaaaca
ctgcaggactctctgctccctgacatccagaagaacctggaggatttcaggcaaaagcgc
agtatgggcctaacggtggctgaagtagagctggccagactggaccaagagagagtcaga
gaccgtgtcactctggagcgagagcgctcttatgctgagaacatcatcaccaagatagag
gatatcctgttaacaactcagaccacagaggaagagaaatgcactacaatgcagtatgtc
atctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggagtcc
aaacgggtcaggatcaacttccttcccaagattaagaaaagcatcaagacagaaaaggaa
ggagaagagaaggtgaagaaacccagatttcccagtattcttggacctcagcgtcggccc
agccgcatcgaagcagcatcagtgggtaaagccttggatggtcgccccaggccgcagaaa
cagttgtctcagcccacactgggagcgagtgatcacatggaagctggtcgtctaagaggc
agccaatcaagcgagggctctgaactcacacactccatgtctctcaacacctcatcccca
aacagcgccacctatagctcggacacaagccgagacactgatatgggtgggactccaacc
tcaggcccttccaggctgagtgatggccttcagtccgacactcttgatgggttgtcatac
cctgcttcgcactttgacctttacagcctcgaccagctgcaagaggatgacagagaaagc
gacagagtccacgagggaacaccaaaggccataagaaggctcgagggactgggtgcagct
gatgtccagagtgaggacgaccagggaacagactccgagcatgaccctccaaactggcag
cagctggtggggcgagaggtcctagcgggtctcaggcctcaggaaatcaagagacaggaa
gttattaacgagctgttctacacagagcgtgcacatgtacggatgctgaaagttttggac
cacattttctatcagaagctctccaaagaggccatcctgcctcctgctgacattaagaac
atcttcactaacctggaggagattctacagctgcatgtttcaatactggagcaaatggca
gccgttcggaagagaaatgagtcttcagtaattgatcagataggagacgacttgctctct
tggttcagcggtggagaggaggagaagatcaagcaggcagtggggacgttttgcagcaac
cagccttttgctctagagatcatcaagagcaagcagaagaaagactcgcggtttacttca
ttcatccaggaggcagagagcaacagactgtgtcgccgactgcagcttaaggacatcatt
cccgtagagatgctgcgtctcaccaagtaccccctgctactagacaacatcgccaagtac
acagacaacgcagcagagaaggacaaagtgaagcaggcagcagactgctgtagaaagatc
ctcaatcacgtcaaccaggctgtgaaggaatccgaggacaagcagaggttggaggactat
cagagaagattggacctctcctctctaaagcagacagacaacgccatgatcctggagcta
aagaacttggatctaaccaagagaacgatggtgcatgagggaccactgtcatggaaagtg
aacaaggacaagactattgagttgtacacactcctcctggaggacatcctggttctgctg
cagaaacaagatgagcgtctaatcctgaagtgtcacagtaaaaacctggcaggcactgca
gacaccaaacagatcttcagccccatcatcaaactcaatactgtgctggtgcgctctgtg
gccacagacaacaagtcctttttcgtcctatccatgtctgacaacggagcccagatctac
gagctgatggcacccacagtctcagatcagagaacgtggcagcgtctaatcacccagagg
gctgacgccatgaaagtgaaacctcacagcgtcatacctttacctcagactgatggggag
agagacggtgtggagatcatcacgacgggcgtttccaggctgagtcgagacccagaccgc
acatccaccggcagcacccagtccacagataaagagagcagtccagccccgagaagtgtg
acgcagagttctctacctggtaacaatccctttgagggcgtaaaggcagaggaagaggag
gaggaggaaggtttcgtggacccagagcctccttaccaagtggctgaagatggcaaagaa
ggagactctttcaacatgtttccctctagagcagacgaagcactgaaaacattggcagca
ttaaagcaggtgttggtgacccagctgatgtcccaggaggctgtggagcaaaccaaacgc
tccacgggggcacgtctcctaaggaccacctctctgcggacccctgtagacagtcgcgca
cgggtgatggtccataatggctcagagaagaacaactctcagacagaggacccgactcag
gacctgggctctggggacacaggcttctttgattctcctgaagattatgcagggtattta
gtcctggagggttacggtggcccgggggagagcagcacagatgatgacatattggcatca
accacagggaagcagctgaggacctcacaaggctgcgccgccgactctggcatcaacttg
aggttttcttcgacgtcacaggccggcagcctctcctcttttagcagacaggtcttgtct
caccttagaaaccttcaggccaacctcaactatctgaaggaggttgaggccaagtacaat
aatctaatacgccaaaggccggagaggccagcagcggacacggatggaagcaaagataag
agatag
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integrated database retrieval system
