Epinephelus fuscoguttatus (brown-marbled grouper): 125888742
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Entry
125888742 CDS
T08419
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b
KO
K06081
poliovirus receptor-related protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03266
Virion - Herpesvirus
efo04514
Cell adhesion molecule (CAM) interaction
efo04517
IgSF CAM signaling
efo04520
Adherens junction
efo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
125888742 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125888742 (nectin1b)
04517 IgSF CAM signaling
125888742 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125888742 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125888742 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125888742 (nectin1b)
04090 CD molecules [BR:
efo04090
]
125888742 (nectin1b)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
Nectin family
125888742 (nectin1b)
CD molecules [BR:
efo04090
]
Proteins
125888742 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Ig_PVRIG
TM_ErbB1
Phage_Coat_B
Motif
Other DBs
NCBI-GeneID:
125888742
NCBI-ProteinID:
XP_049432247
LinkDB
All DBs
Position
LG5:33650868..33740067
Genome browser
AA seq
499 aa
AA seq
DB search
MAMCVGIWILLLALHVQAGNGQMVQMDSSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LLNSTKQNVAIANPALGVSVLPPFKERVSFKQAAVRHRTPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARAQKRKMTVATCVSANGKPPSVI
KWETRLKGEATFQETRNQNGTVTVRSNYVVVPSRETHKQRLTCIVTYRNEKITDSVVLNV
QYEPEVKIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSLPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGIVDVNITEFPNNPTPKGHEIPQEQHNAGAAIGGAVG
GVVLLGVAAILLFVFLRRRQRTFKGDYSTKKHVFGNGYSKAGGLPAHPPIPKNLQYPDDS
DDEKKPSQIGGPGGFEASERDFDAEQEDLKRPYFTVDEGESRDYDERTLAFQYDPEPEIA
DDMISQTDGSVISKKEWYV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgtgtggggatatggatactcctgttagcgctgcacgtccaagctggcaac
gggcagatggtacagatggactccagtaagtccggctttgtgggttcacaagtggaactg
cgctgcattttcatcaacagtaacccgccagtcaagatctctcaggtcacctggcagaag
ctcctcaacagcaccaaacagaacgtggccatagccaacccggccctcggcgtgtccgtc
ctgccgccctttaaggagcgagtcagcttcaagcaggcagcggtccgtcatcgtacgccc
tcgctggaggacaccaccatcgtgttctccaacctgcagctgtctgatgaagctgcctac
atctgcgaatatacaacatttcctgcaggaaaccgggagaacatggtcaacctcactgta
tttgctcggcctatgacacgtatgaccctgacaacgcccacgattgtagccagggcccag
aaacgcaagatgactgttgcaacttgtgtatcagctaatgggaaacccccaagtgtgatc
aaatgggagaccagattgaagggcgaagccactttccaggagactcgcaatcaaaacggg
acggtgacggtacggagcaactatgtggtggtgcccagccgcgagacccacaaacagagg
cttacgtgtattgtgacgtaccggaatgaaaagatcacagacagcgtggtgctcaatgtg
caatatgaacctgaggtgaagatcgagggcttcgatggaaactggtacctgaaccgtcag
aatgttcagctgacctgcagggctgatgctaacccccctgtcacgatctaccagtggaaa
ctcttgaacggctccctgcccagtaatgtggagatcaagaacaacaccctgttcttcaag
gggccagtgacctacgacctggccggtacgtacgtctgtgacgcgaccaacggcatcggg
actcgcactggcatcgtggacgtcaacatcacagaattccctaacaacccgacacctaag
ggccatgagatcccgcaggagcagcacaatgcaggtgccgccatcgggggcgctgtgggg
ggagtcgtcctgttgggcgtagcggccatactgctcttcgtattcctgcgccgccgccag
cgcaccttcaaaggagactacagcaccaagaaacacgtgtttggtaacgggtacagtaag
gccggcggcctgcccgcccaccctcccatccccaagaaccttcagtacccggacgactcg
gacgacgagaagaaaccctcacagatcggtggccccggagggtttgaggcgagcgagcgc
gattttgacgcagagcaagaggacctgaagaggccctatttcactgtggacgaaggggag
agccgagattatgacgagcggactctggctttccagtatgaccctgaacctgagatagcc
gatgatatgatctctcaaaccgacggctctgtcatttctaagaaagagtggtatgtgtag
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