Epinephelus fuscoguttatus (brown-marbled grouper): 125889063
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Entry
125889063 CDS
T08419
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03440
Homologous recombination
efo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125889063 (brca2)
03460 Fanconi anemia pathway
125889063 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125889063 (brca2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125889063 (brca2)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125889063 (brca2)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125889063 (brca2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125889063 (brca2)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
125889063 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
125889063 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
125889063
NCBI-ProteinID:
XP_049432668
LinkDB
All DBs
Position
LG5:31167507..31183520
Genome browser
AA seq
3025 aa
AA seq
DB search
MNFPSKNMYDTYKDEIWKELGPLDPNWFEALTAQTFTNEGNVSDQDDLCANQEGNFKTPL
DKAAADSQLFSTPKVFRKSRIVSPETEDERSFTAEQEKETFTWMATQSPCMFRVSKMGVP
GEKYGDFQPQSQSSFDLLHTPQKSPLSHAKHISESLGAQIHPDMSWTSSLNTPPAVPSTL
ILSKTDESPCPVRVSPDKNVVIVRKLFPSLSNASRIEVVSSKNNDIPTIHQGVVSPEASQ
NPETHKSPQSSLNQSDGVWKQKLPDAVEDGEICRTGASVLDGAENVLSPFFTNSSSALRK
VKTDRVKRKQIIPTKEDADNNANGAASSEQRTDDQEPGRLRSSPPVKTGDIEITQWSPLS
LSEIPPCTVDSACYDSSPAQVENKMLTEQLQSDSVFSLPVRPPMKTPDSGWTKKKRKFVY
TVKTPEVQGKEAQSQRMDSSPGQEVHVKQSEKAQDEADSCSIGKKEMQKQGNVAEESLPS
FVQGKVQDLDMSQLCRDFAQDFSQMLDPSKPSKEAEYTPQDGFSPSACLSAMKQAKQKAM
QANLHHDCDGVSNRKHFSTTNPKNSISEGTISDSGFQSVVADSTHVTASSFVLPSSEING
ESQQWTGFKTDMHRTTPFASSSKGNGKENLDNISQGAETDAKLPSTIRGSQTLGLGRESD
LPIESTSAQLPSSTKGTVNNINCVPLNGQAHGSLPQKTTVSLPSVHTSGFKTASNKGIHI
SSANLKKAKRLFEEIEGERTISEQPTICDHGTKEEISVSCESVKNPTTMSNQPLSSSEKN
VDISCHLTASQKADVTEICTLLEEADTQFEFTQFKTANLKQHSQDNAASPQKVDKELDPD
FLSGIDFDDSFSAEAEKHVAVTVSQDKITLGSDGKTNCETSNVTSKSTGLSLSSAVKIEN
PSTEAVSSSSKQISEGSSRIMSAEPKNLDSTGHPETSKLENKNPVMLGVGFKTAGGNILR
VSKTCLSKARALFADLEDNLVTSQKSPDKKCSKTDAETQHKHSGDNHTGNVLLHKDDKSE
FTGNDTGGSIQGCFSNTKEYVSSYKQVTSIRDDVTGNLKNSKLDTTTCQSGFLMASGRSI
SISAKAMQEADAFFKDCDSMDTNTGMPVKHKKTMEPLPGSLSHKETLPKCKNVQGINVKV
SEEPINEFENGNAGPTARHTEVVQHNVEVPNFGFKNTPMLTNVVPSLTTKALSSLSCTTS
KNIGSSSSGGFSTASGKKVSLSADAMKKAECLLNEIHTLEDTNQQLKQKGDAFRSSHLTS
QIQIPPKNGGFQTASGKGFAISSAALKKAKLLLRECDVVEDEIGTKPTHSKMPVPPLPPK
NSGFLAASGKPVTFSSEALQKAKALFTDISLSTEIPAASGSKTTDRKQANSENTEKIHCG
FTTAGGAKVHVSQKNLLKARNLLKEFDDGCISAKAMQETDAFFEDCDINDAISVKHKSVA
PVSGSGSEKKKPSELKQDQRVTNIYEEPGNGHTDFENVNVGPVVNHEKLLHPNAVENDKG
VLKGTLDSFKAASLHGNPVMAKPRSPVLCTTSKNIGGFCTAGGKKVTVSDDAMTKAKSLQ
SATFEDTNKQLKQKEDTFPQNNGGFQTASGKGVAISSVALKKARILLSECEGADDEIGVK
PTHSKTPVPSVPPKNRGFLAASGKPVAFSSEALQKAKALFSDISFSTEIPAISDTRNTDK
KHGNSEITEKMHCGFTTAGGAKVHVSQKNLLKARNLLKEFSDGQCHVSNASSEGPDDTNK
SDLSKVKDVNRASNSNLSMSCDKEMPSKFSAPRVVKPLQDTDHEKETLETPSVPGGVLAK
DKALPDSYKSKGDKMTPSGSCINNSPGEGMSSLLDYEKNQTSSSDESKVKRPQDSSVLNF
QSFNLSGCTETQQMFFAQEALDCTKALLEDESLAGQSLSVTLETVPLQDNPESSCKSVKE
QKGTGKRSVEDPDITGQPPLKRRLLEEFDRTVDGPRGSTLHPEKSCPNGVMKDRRVFKYH
VSLHPNITRPDSNGKNYVETTLQKTTPTQHSTPGDSRSTQSNMPAFVPPFLKNTRTESSM
NTELKDMRPPCAFVPPFKKQRTLVQVNSSRPQEEEDKHHHLFVTPFNSNTFVPPSKKTPT
TTDITGDRSKEGIQTVALADTANDHMMNNQNLPIGCGSEDSAAEASHVEDTLSTSQDMFQ
NLQNIELAQDMQDMRIRKKKRQTIRPLQGSLFLTKTSGVSRIQLKAAVNGRPPARYTQKQ
LYGHGVHQHVYGITSETAESFRFSLQQFIKQEAFIDGGGVQLADGGWLIPRRDGTAGKEE
FHRALCDTPGVDPKLITEEWVYNHYRWIVWKQASMERSFPKTMGSLCLTPEQVLLQLKYR
YDVEVDHSRRPALRKIMEKDDTSAKTLVLCVCGIVSRGHSPNSFGDTKTPQGADAKAENP
FAVVWLTDGWYAIKAQLDEPLTAMLHKGRVCVGGKLIIHGAQLVGSQDACSPLEAPESLM
LKICANSSRPARWDAKLGFHRDPRPFLLPISCLYSGGGPVGCVDIIILRSYPIQWMERKP
DGGTVFRSIRAEEKEARRYDSHKQKAMEILFAKIQAEFEKEDKGCNKTQRRRRTISCQDI
KSLQDGEELYEAVGDDPAYLEAHLSEQQLETLRTYRRTQMEKKQAELQDRYRRALENAEN
SEGSCPKRDVTPVWRLCIADSMEQPGNVYQLNLWRPSSDLQSLLKEGCRYKVYNLTTSDG
KKHGGSTTLQLTGTKKTQFQDLQASREWLSTRFHPRVSTDFVDLQNPEFQPLCGEVDLTG
YVITVIDGQGLSPAFYLTDGKLNFVKVRCFSSFAQSGLEDLVRARVLLALSNLQLRGQSM
SPTPVVYAGDLTVFSTNPKEVHLRESLSQLRTLVQGQENFFTVAEEKLSNVVKSDSLRSV
SSPALQTRTPASATVRRQDTKTSVTPQQPVRSLGSFTPVSRKQPAANSSTEKDHSSLKRR
RALDYLSRIPSPPPLSSLVPVASPCVKKTFNPPRRSGTLSTLKTAPKTAQTPACKPVSSP
LEDEWVNDEELAMIDTQALHVGDLL
NT seq
9078 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccttcaaaaaacatgtacgacacgtataaagatgaaatctggaaagagctg
ggaccactggaccccaactggtttgaggcattgacagctcaaacattcacgaatgaggga
aatgtctctgatcaagatgacctgtgtgctaaccaagaggggaattttaaaacacccctt
gacaaagctgcagcagacagtcagctgttttcaacccccaaagttttcagaaaaagtcga
attgtgtcacctgaaactgaggatgagcgctcgttcactgctgaacaagaaaaagagaca
ttcacatggatggcaacacaaagtccatgtatgtttcgggtgtcaaaaatgggggtccca
ggtgagaaatatggagattttcagcctcagagtcagagcagctttgatctgcttcatacg
ccacaaaaatccccactaagccacgccaagcatatatctgaaagtctcggtgcacagatt
catcctgatatgtcatggaccagctctctgaataccccaccagcagtaccatccaccttg
attttatctaaaactgatgagagtccctgtccagtgagagtttctccagataaaaatgtt
gttattgtgcgaaagctttttccttcactttcaaatgcttccagaattgaagtggtgtca
tccaaaaacaatgacatacctaccattcaccaaggtgttgtttcccctgaggcaagtcag
aatccagagacccacaagtccccccagagttctctgaatcagagtgatggtgtttggaaa
cagaagctaccggatgctgttgaggatggagaaatttgcagaacaggagcaagtgttctt
gatggagctgaaaatgttctctctccatttttcaccaacagtagttcagcactaagaaaa
gtgaagactgacagagtcaaaagaaagcaaatcattccaacaaaagaggatgcagacaac
aatgcaaatggtgctgcatccagtgaacagagaacagatgaccaggaacctggcagactt
cgttcatccccaccagtgaaaactggagatattgaaatcacccagtggtctccattgagt
ttatctgaaattccaccttgtactgtggatagcgcttgctatgatagtagtcctgctcaa
gtggaaaacaaaatgttaacagaacaactacagagtgactctgtttttagcctgccagtc
agaccacccatgaaaactccagattctggatggaccaagaaaaagagaaaatttgtttac
actgtaaagactccagaagttcaaggaaaagaagcacagtctcagaggatggactcgtca
ccaggacaagaagttcacgtgaagcagtctgagaaagcccaagatgaagcggactcttgc
agtatcgggaagaaagagatgcaaaaacaaggaaatgttgcagaagaaagtttaccttct
ttcgtacaaggaaaagtccaggatcttgacatgtcgcagctttgcagagattttgcacaa
gacttcagtcaaatgttagaccccagtaaaccaagtaaagaagcagagtatactcctcaa
gacggcttctctccatcagcttgtctgtcagccatgaaacaagctaaacagaaagcaatg
caagcaaaccttcaccatgactgtgatggcgtcagtaacagaaagcatttttctaccact
aatccaaaaaactccatcagtgagggcacaatcagtgacagtggattccagtctgttgtt
gcagatagcacccacgtgacagcatcatcatttgttcttcccagctcagagatcaatggt
gaaagtcaacagtggactggctttaaaacagacatgcacagaacaactcctttcgcatct
tcaagtaaaggaaatggaaaagaaaatttggataatatttcacaaggagctgaaacagat
gccaagctgcccagtacaatcagaggaagccagacactgggccttggcagagagagtgac
ttgcctatagaaagcacatcagcacaactacccagcagtacaaaaggaactgtcaataac
attaattgcgttccacttaatggtcaagctcatggtagtctgccacagaaaacaacagtt
tctcttccttccgtccatacatcaggattcaaaacagcttcaaataagggtatacacatt
tcctcagccaacctgaagaaagccaagcgtctctttgaagagattgagggggaaagaact
ataagtgagcagcccaccatatgtgaccatggcactaaagaagaaattagcgtgagttgt
gaatcagtgaaaaatccaaccacaatgtcaaaccagccactttcttcaagtgaaaaaaat
gtggatattagttgccacttaacagcttcacaaaaagctgatgtgactgagatttgcact
ctcttggaagaagcagatacccagtttgaatttacacagtttaaaactgcaaacctaaaa
caacatagtcaagataatgctgcctctccccaaaaagttgacaaagaacttgaccctgat
tttctttcaggtatagattttgatgacagtttcagtgcagaggctgaaaagcacgtggca
gtaactgtatcgcaggacaaaataaccttaggttcagatggtaaaacaaattgtgaaaca
tcaaatgtcacaagtaaatctacaggtttgtcattgtcaagtgcagtgaaaatagaaaat
ccctctacggaagctgtttcttcctcttcaaagcagatctctgaaggcagtagcagaatt
atgtcagctgaacccaaaaatctcgacagcactgggcaccctgaaacaagcaagctggag
aacaaaaatcctgtaatgcttggtgtgggatttaagactgcaggaggaaacattttgaga
gtttcaaaaacgtgtctaagcaaagccagagctttgtttgcagatttagaggataatctt
gtgacaagtcaaaaatcaccggacaagaagtgtagcaaaactgatgctgaaacacagcat
aagcatagtggggataatcacactggtaatgttttgcttcataaagatgacaaatcagag
ttcacaggtaatgatacaggagggagcattcagggctgtttttccaacacgaaggagtat
gtctcttcatacaaacaggtcacaagcattagagatgatgtgacaggaaatttgaaaaat
agcaaactggacacaaccacatgtcaaagtgggttcctgatggccagtgggagaagtatt
tctatttcagcaaaagctatgcaagaggcagatgctttcttcaaagactgtgactccatg
gacactaacactggcatgccagtgaaacataaaaagaccatggaacccttgcctggaagt
ttgagtcataaggaaacccttccaaaatgtaaaaatgttcaggggataaatgtcaaagtc
tctgaagaaccaatcaatgagtttgaaaatggaaatgctggaccaactgcacgccataca
gaggttgtacaacataatgtggaggttcccaattttggttttaagaatacaccaatgtta
acaaatgtggtcccctctttgactacaaaggcactttcatctctctcgtgcacaacatca
aagaatattggctcctcaagtagtggtggattttccacagccagtgggaagaaagtatcc
ctgtcagctgatgcaatgaaaaaagcagaatgcctactgaatgaaattcatacacttgag
gacactaaccaacaactgaagcaaaagggagatgctttcagatcaagtcatctcaccagt
cagattcagataccacctaaaaatggtggctttcagacagccagtggcaaaggatttgcc
atttcatctgcagctctcaagaaagcaaaattgctgttgagagaatgtgatgtagttgag
gacgaaattggtacgaaaccaacacattcaaagatgccagttcctccactaccaccaaag
aatagcggatttcttgcagccagtggtaaaccagtgacattttcatctgaggccctccag
aaggcaaaagctctcttcactgacatcagtttaagtacagagatcccagctgcttcaggc
tcaaagaccactgacaggaaacaagccaattctgaaaacacagagaaaatacattgtggt
ttcacaactgcagggggagctaaagtccatgtgtcacagaaaaatctgttgaaagcaaga
aaccttttgaaagaatttgatgatggttgtatttcagcaaaagcaatgcaagaaacagat
gctttctttgaagactgtgacattaatgatgctatttcagtaaaacataaaagtgtagca
cctgtgagtggaagtggaagtgagaagaaaaaaccctcagaacttaaacaagatcaaagg
gtgacaaacatttacgaagaacctggaaatggacacactgactttgaaaatgttaacgtg
ggaccagttgtaaaccatgagaagttgctgcatcccaatgctgtggagaacgacaaaggt
gttttaaagggcacactggattctttcaaagcagcttctttacatggaaacccagtgatg
gcaaagccacgttctccggtgttgtgcacaacatcaaaaaacattggtggattctgtaca
gccggtgggaaaaaagtaaccgtgtcggacgatgcaatgacaaaagcaaagtctctacaa
agtgctacatttgaggacacaaacaaacaactgaaacaaaaggaagatacttttccacaa
aacaatggggggtttcagacagccagtggcaaaggagtagctatttcatctgtagcccta
aagaaagcaagaattctgttaagtgaatgtgaaggagctgatgatgaaattggtgtaaaa
cctacacattccaagactccagttcctagtgtgccacccaagaacagaggatttcttgca
gcgagtggtaagccagtggcattttcatctgaggccctccaaaaggcaaaagctctcttc
agtgacatcagtttcagtacagagattcctgctatttcagacacaaggaacactgacaag
aaacacggcaattctgaaattacagagaaaatgcattgtggtttcacaactgcaggggga
gcaaaagtccatgtgtcacagaaaaatctgttgaaagcaagaaaccttttgaaagaattt
tctgatggacagtgtcatgtctcaaacgcatcgtcagaagggccagacgacaccaataag
tcagatctatcaaaagtgaaagatgtgaacagagcttcaaattctaatctcagcatgtcc
tgtgacaaggaaatgccttctaagtttagtgcccctcgggtagttaaacctttgcaagac
actgaccatgaaaaggaaacacttgaaactccaagtgtacctggtggtgttttagccaaa
gacaaggcacttccagattcatataagtctaaaggagacaaaatgaccccatcagggtcg
tgcatcaataacagtcctggagagggaatgtcaagtctgttggactacgaaaaaaatcag
acaagcagcagcgacgaatctaaggtcaaaaggccacaagactcttcagtcctaaacttt
cagtcatttaacctcagtggttgcactgaaacccagcagatgtttttcgcccaggaagct
ctggattgcactaaggctttgttagaggatgaaagtctggctggccaaagtctctcagtg
actttagaaactgtgccactgcaagataaccctgagtccagctgcaaatctgtaaaggag
caaaagggaacagggaaaagatcagtagaggacccagatattactggtcagcctcccctg
aaaagacgattactggaagaatttgacaggacggttgatggtccgagaggttcaacactc
catccagagaaaagttgtccaaatggtgtaatgaaagacaggagagtttttaagtaccat
gtctctctccatccaaacatcacaaggccagacagcaatggaaaaaactatgtggaaacc
acattgcaaaagacaacaccaacacaacactcaaccccaggagacagtagatcaacacag
tccaacatgccagcatttgttcctccattcctcaagaatacaaggacagagagttccatg
aatacagagctcaaggacatgagaccaccttgtgcatttgtacctccattcaagaaacaa
agaactcttgtccaagtgaactcctctagaccacaggaggaggaggataaacaccaccat
ctgtttgttacaccctttaacagcaatacttttgtaccacccagtaaaaaaacaccaacc
acaacagatataacaggtgatagaagcaaagaaggcattcagacagtggccttggctgac
actgcaaatgatcatatgatgaataatcaaaaccttcctattggctgtggatcagaggac
tctgctgcagaagcttcacatgtagaggacacattgtccacaagccaagacatgtttcag
aatcttcaaaacatagagctggcacaagatatgcaagatatgaggatcaggaagaagaag
cgccagaccattcgacctttgcagggcagtttgtttcttaccaaaacctcaggagtatcg
aggatacagttaaaagctgcagtaaatggaaggccacctgcaagatacacccaaaaacag
ctgtatggacatggagttcatcagcacgtgtatgggataaccagtgagacagcagaatct
tttcgcttcagtttacagcagttcatcaaacaggaagcatttatagatggaggtggtgtt
cagcttgctgatggaggatggctgatccccaggagggatgggactgcagggaaagaggag
tttcatagagcattatgtgacacaccgggggtggatcctaaactgatcactgaggagtgg
gtgtacaatcactaccgatggattgtgtggaaacaggcctccatggaaagatcatttccg
aaaacaatgggcagcctctgtctcactccagagcaggttctccttcaactcaagtacaga
tatgatgtagaggtggaccacagccgcaggccggctctgagaaagatcatggaaaaggac
gacacatcggccaaaaccttggtcctctgtgtttgcggcatcgtctccaggggtcactcc
ccaaacagtttcggtgacacaaagactccacaaggtgctgatgccaaggctgaaaacccc
tttgcagttgtctggctgacagatggatggtatgccattaaagcccagctcgacgaacct
ttgactgccatgcttcacaaaggtcgagtgtgtgttggtgggaagttgatcatccatggg
gctcagctggtgggatcacaagatgcttgctcccctctggaggcaccggaatctctcatg
ttaaagatttgcgccaatagcagcagaccggcacgatgggatgctaaactgggatttcac
agagatccacggccattcctgctgcccatttcctgtttgtacagtggtggaggaccggta
ggatgtgtggacattatcatactgagaagctaccctatacaatggatggagaggaaacca
gatggaggcactgtgtttcgttctattcgtgcagaagagaaagaggcgagacgatatgac
agccacaaacaaaaagctatggagatcctatttgccaagattcaagctgaatttgagaaa
gaagacaaaggttgtaacaagactcagcgtagaagacggacaatcagctgtcaggatatt
aaaagtcttcaagatggagaggagctctatgaagcagtgggggatgatccagcctacctt
gaggcacatttgagtgaacagcagttggagactctacgtacctacaggcgcactcagatg
gagaagaagcaggctgaactgcaggatcgctaccggcgagctttagaaaatgcagagaac
agtgaaggtagctgtcccaagcgagacgttacgcctgtgtggagactctgcattgctgac
tccatggagcaacctggcaatgtttaccagctgaacctttggcgaccttcctcagatctt
cagtctttacttaaggaaggctgtcgatacaaagtctacaacctcaccacttctgatgga
aagaaacatggtggtagcacaactcttcagctgactggaacaaagaaaacacagtttcag
gacctgcaggcttctcgagaatggttatcgacacgttttcatccgagggtctctactgat
tttgtggatcttcaaaacccagaattccagccactgtgtggagaggttgatctcacagga
tatgtcatcactgtcatagatggacagggtttgtctccggcattttatttgaccgatggg
aaactgaacttcgttaaagtgcgctgtttcagcagctttgctcagtctggcttggaagac
ctggtaagagcacgtgtcctgttggctctgagcaacctgcagctgagaggccagtccatg
tctcccactcctgttgtgtacgctggagatctgaccgtcttctcaacaaaccccaaggaa
gttcacctacgggaatccctcagccaactcagaaccctggtccagggtcaggagaacttc
tttacagttgctgaggagaagctttcaaatgtagtcaaatctgacagcctgaggtccgtc
tcctctcctgctctgcaaacacgaaccccagcttctgcaacagtcagaagacaagacaca
aaaacaagcgtgacacctcagcagccagtcagaagcctcggatccttcactccggtcagc
aggaaacaacctgcagcaaacagttcgacagagaaggaccacagcagcctgaagcggagg
agagctctggactatctgtctcgtattccatctccaccacctctctcttcgctggtccca
gtggcttctccgtgtgtaaaaaagacattcaacccccctcggaggtccgggacgctcagc
actttaaaaactgcaccaaaaactgcacagactccagcttgcaaacctgtcagttcaccg
ctggaggatgaatgggtgaatgacgaggagttggcaatgattgatactcaggcattgcat
gttggtgatttactgtag
DBGET
integrated database retrieval system
