Epinephelus fuscoguttatus (brown-marbled grouper): 125889212
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Entry
125889212 CDS
T08419
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125889212
03041 Spliceosome [BR:
efo03041
]
125889212
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125889212
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
125889212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125889212
NCBI-ProteinID:
XP_049432961
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Position
LG5:31900110..31940012
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AA seq
760 aa
AA seq
DB search
MDAVNAFNMELFSMIDLKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFTDTFQNLFRCPEDDKSKIIRVLNLWQKN
GVFDMGIIQPLMDMANGAIVGLPAPALEVPADPQPETQLPVTSAPVVPAVPQLPSPDALA
AVAQLFQSPHGQELQRMLHNFQQADKTLAATIGNNIPNQPQMPAAQLNPYNAHTEKKSSL
AEKLLDRFDYDDEPDDITAKEGSAQSQGIPENVFNQFPGQMPKTENVHPYMTGQPGIEHS
EGMTQGEHQMMLDGYHAINEAYSQSQGNSREDSSRRESRHRGYGRRSRSRSGSRSPRRRR
SRSSSRSRRSRHRRSNSRSRERRWRSRSRSQDRNEREKDRERRQKGLPSIKSQTLSVCST
TLWVGQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKLSRGSY
KVNQKPVKIAWALNKGIKSAHKKFWDVERGVTYIPWSKVKVEELESYREGGMLDTETLNP
EWNHGKDLKKQAAVNGALESVPADGTVTAHIQVPVVQQATSIGSPPAFPGPIMLSPPSMP
PVGAPFIPTEFDPTKLAGSAKPPEESNKDSKGDKGPPTDPGTGNQLGSPVGPVMTLPGPG
IMQGPRPGMPPLQPPPVMPSPHLPPFLPPPNMAHMPPQIMPGGPMFPPDRFRMAMPFPPR
GPPFHRHPSMGPEGMDDREARHFRNGRAGFGCPPFHRGRW
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtaaacgcgttcaacatggagttgttctccatgattgacctgaagcctcca
atatcccgtgctaagatgatgtctgtaacaaaatcagccatcaaagctatcaagctttac
aaacatgtcgtacagattgttgaaaagttcatcaagaagtgcaagccagagttaaaagtc
cctggtttgtatgtggtggattccattgtccgacagtcaaggcatcagtttggtgtggat
aaggatgtatttgggcccagattcttaaagaacttcacagataccttccaaaacctcttc
cgctgtccagaggatgataagagcaaaattatccgtgtcctgaacttgtggcagaagaat
ggtgtgttcgacatgggcatcattcagcctctgatggatatggccaatggagcaattgta
ggcttacctgctcctgcactggaagttcccgctgacccccaacctgagacacagcttcct
gtcactagtgccccagttgtgcctgctgtgcctcagctacccagtcctgatgccttagct
gctgtggcacagctttttcagtccccccatggtcaggagctgcagaggatgctccataac
ttccagcaggcagataagaccctggcagccaccatcggaaacaacataccaaaccaacca
cagatgcctgcggcccagctcaacccatacaatgcacacactgaaaagaaaagctcttta
gctgagaaactccttgaccgatttgactatgacgatgaacctgatgatataacggctaaa
gaaggaagtgcccagtcacaaggcattcctgaaaatgtatttaaccagtttcctggtcaa
atgccgaaaaccgagaatgttcatccatatatgacgggacagcctggtatagagcacagt
gaaggaatgactcaaggtgaacatcagatgatgctagatggataccatgccattaatgag
gcttattcacaatcacagggaaattcaagagaagactcatctaggcgagagagcagacac
agaggctatggcaggagatcaagatccagatctggttcacgatctcccaggagaagaaga
tcaagatcttcatcacgctcaagaaggtcaaggcatcgacgctcaaattctcgctccaga
gaacggcgctggagatctcgctctcgttctcaggacaggaatgaaagagagaaggacaga
gagcgcagacaaaaaggtcttcccagcataaagagccagacactcagtgtttgcagcacc
acactatgggttggacagctagacaagaaaactcagcagtctgatgtgatgtcccttttg
gaagaatttggccagattgagtctataaatatgattcctccgaggggttgtgcctatatt
gttatggttcacagacaagatgcctatacggctttgaacaaactcagtagggggtcatac
aaagtcaatcagaaacctgttaagattgcttgggctttgaacaaaggtataaagtcagca
cacaaaaagttctgggatgtggagcggggagttacctacatcccctggagcaaagtcaaa
gttgaggagttggagagctatcgagaagggggtatgctggacacagagacactaaatcca
gagtggaatcatggcaaggacctcaaaaagcaggcagctgtaaatggggctctggaaagt
gtaccagcagatggaactgtcactgctcacattcaggtgccagtagttcaacaggcaaca
tccattggaagtccacctgcttttcctggtcctataatgctgtcccctccctctatgcct
ccagtaggagctcctttcatcccgacagaatttgaccccacaaagttggcaggaagtgca
aaacctccagaggagtccaacaaagattctaaaggagacaaaggaccacccacagatccg
ggcactggcaaccagctggggtctcctgtgggaccagtgatgaccctgccaggcccagga
atcatgcagggtcccagaccgggcatgccacctctacagcctcctcctgtcatgccgagt
cctcatctacctccattcctcccacctccaaacatggcacacatgcccccgcaaataatg
cctggaggacccatgtttccaccagataggttcagaatggctatgccttttcctcctcgt
ggccctcctttccatcgacatccttcaatgggaccagagggcatggatgacagagaagcg
aggcatttccgaaatgggagggcagggtttggatgccctcccttccacagagggagatgg
taa
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