Epinephelus fuscoguttatus (brown-marbled grouper): 125889303
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Entry
125889303 CDS
T08419
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efo03009
]
125889303 (tsr1)
Ribosome biogenesis [BR:
efo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125889303 (tsr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
NUSAP
Motif
Other DBs
NCBI-GeneID:
125889303
NCBI-ProteinID:
XP_049433119
LinkDB
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Position
LG5:28237532..28249693
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AA seq
836 aa
AA seq
DB search
MVKMAALGEKQQGHRPGVYKQKNKGHKHGKHRTKGEIERENKGRVSVTALTKKQRKEQKR
MDRRHKASQLRRNKKDMVLTEKRRLGTRDGPPHLVAVVSLHAGVDAGAITKLLRGEDAGG
VVHQERCISGISDSFGLILPRFKQRFTFLSHSTADMHSLLDVAKIADSLVFVLDSTEGWD
SYGDYCLSCLFAQGLPSHALVCQGVSDLPVKKRVESRRALSKITEIRFPDTRLFPLDSEQ
DATLLLRHLGTQRQRKLGFRSRRSHLLAQHVTFTPNSPAEGTGGGPTGLGTLCVSGYVRG
RPLQVDRLVHISGHGDFQISQIDAPSDPLPLNLTTARPAKPGKGDVDMQDGGEEEAPVRV
LMKADPSRRESLQAEAEVDPMDGEQTWPTESELQEAEEARKNKRVMKVPKGTSDYQASWI
VDEYEEENGEMDEESSDEDDDDDDMLDEAMDGEDEDNNSQEPGSDCASEEEEEEEEEEEV
CSTERTGADQRYDEHIDEAAEEEGLKRYREARANEMFPDEVDTPLDTAARIRFQRYRGLK
SFRSSPWDPMENLPLNYSRIFQFQSFERTRRRILAEAAAEEEGAMVGWYVTLHIIDVPFS
VMESVQSGRPLIMVSLMPHEQKMSVMHLLVRRHPSNTEPIKSKEELVFHCGFRRFRASPI
FSQHTSADKHKMERFLRPDAPTVVSVYAPITFPPAGVLLFKQRNDGIQDLVATGSLLSCD
PQRIMLKRIVLSGHPFKINRRSAVVRYMFFNRDDIMWFKPVELRTKWGRRGHIKEALGTH
GHMKCVFDNQLRSQDTVLMNLYKRVYPRWTYDPYVPTSLPWVKREITMEMHDSDME
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatggctgcgttaggggaaaaacaacagggccacagacccggcgtttataaa
cagaaaaataaaggacacaaacatggcaagcaccggacgaaaggtgaaattgagagagaa
aacaaagggagagtgtcagtgacagccctcaccaaaaaacagaggaaagagcagaagagg
atggacagacgtcacaaagccagccagctacgcaggaataagaaagacatggtcctgaca
gaaaagcgacgtctcggcacgagggacggtcctcctcatttggttgccgtggtgtccctc
catgctggagtggacgctggtgccattaccaaactgctgcgtggggaggatgctgggggt
gttgtacatcaggagcggtgcatcagtggcatcagtgacagttttgggctgattctgcct
cgttttaaacaaaggttcacctttctaagtcatagtacggctgacatgcactccctgctg
gatgtggcaaagattgcagatagccttgtgtttgtgctggactccactgagggttgggac
agctatggagactactgtctgtcctgcctctttgcccagggcctccccagccatgcgctg
gtgtgtcagggtgtgtccgatcttcctgtgaagaagagggtcgagtcccggagagctctg
tcaaagatcacagagatccgtttccccgacacccgtctcttccctctggattcagagcaa
gatgccactcttcttctcagacacctgggcactcagagacagagaaagctcggcttccgc
tccagacgttcccatcttttggctcagcatgtcacttttacacctaacagccctgctgag
gggacaggtggtggaccaactggtctgggcaccctgtgtgtctccggctacgtgcgtggc
cgtcctctgcaagttgacagactggtgcacatcagtggacatggagactttcagatcagt
cagattgatgctccatcagaccctcttcccctcaacttaacaacagccagaccagcgaag
cctggcaagggtgatgttgacatgcaggatggaggtgaagaggaggctccagtgcgggtc
ctcatgaaagcagacccatcccgcagggagagcctgcaggcagaggccgaggtggacccc
atggatggagagcagacatggccaacagaaagcgagctgcaggaagctgaagaggccagg
aagaacaaacgtgtgatgaaagtccccaaaggaacatccgactaccaggcctcgtggatc
gttgacgaatacgaggaggagaacggagagatggatgaagaaagcagcgatgaggatgac
gatgacgacgacatgttggacgaggccatggatggagaggatgaggacaataactctcag
gagccgggttcagactgtgcctcagaagaagaggaggaagaggaggaggaagaagaggtg
tgctccacagaacgaactggagcagatcaacgctacgatgagcacattgatgaggctgca
gaagaagaaggccttaaacgctaccgtgaggctcgggccaatgagatgtttcctgatgaa
gtggacacacccctcgacacggcagctagaatcaggttccagcgctacagaggcctgaag
agtttccgctcctcgccctgggaccccatggagaacttgcccctcaactactcacgcatt
ttccagttccagagctttgaacgcactcgccgccgcatactggcagaggctgcagcagag
gaagagggagccatggtgggctggtacgttacgctgcacataatcgatgtgcctttctcc
gtgatggagagtgtccagtcgggcagacctctgattatggtgtctctcatgccccatgaa
cagaagatgtcagtgatgcacctcttggtgaggagacaccccagcaatacagagcccatc
aagtccaaagaggagctggtgttccactgcggatttcggaggttcagagcatctccgatc
ttctctcagcacacttcagctgacaagcataagatggagcgcttcctgaggccagatgcc
cccaccgtggtgtcggtgtacgctcccattaccttcccccctgcgggagtcctgctcttc
aaacaaaggaatgacggaatccaggacctggttgctacaggcagtctgctcagctgtgac
cctcagcgcatcatgctgaagaggattgtactgagcggacacccattcaaaattaaccgg
cgctctgcggttgtccgttatatgttcttcaacagggatgacatcatgtggttcaagcca
gtggagctgcgaacaaagtggggtcggagaggccacatcaaggaggctttaggaacacac
ggtcacatgaagtgtgtatttgataatcagctgcgctcacaagacactgtcctgatgaat
ttgtacaagagagtgtatcctcgctggacatatgacccctatgtgccaacgtctttaccc
tgggtcaagagagagatcaccatggagatgcatgactcagacatggagtag
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