Epinephelus fuscoguttatus (brown-marbled grouper): 125889354
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Entry
125889354 CDS
T08419
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125889354 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
efo04990
]
125889354 (lrfn1)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
SALM family
125889354 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
efo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125889354 (lrfn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
Ig_2
ig
fn3
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
LRRCT
Sp38
DUF4834
Motif
Other DBs
NCBI-GeneID:
125889354
NCBI-ProteinID:
XP_049433193
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Position
LG5:complement(27917381..28071434)
Genome browser
AA seq
758 aa
AA seq
DB search
MDRLVLCVLLCAALVKGYNCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRRKDFFNMTSLVHLTLSRNTISQITPHAFLGLRALRALHMDGNRLSVIKTDHFK
GLVNLRHLILGNNQIHQVAPTSFDEFVSTIEDLDLSNNNLRSLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHLSTKPYV
MEGQGVTLKCKAVGDPDPDIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSGPEDSKTKVSSSMHSQTNGSQQRLQRSASKQPSDEGQREAHAPKECM
ALVLRVDNEKKEDPASTTAILEVELPPLNADKMKRRTSLDAQCSGPPSEDTQTDSSLTGS
TMSLCLIGPNAGTKEAPRLKDKKSALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctgtgcgtgctgctgtgtgcagctctggtgaagggatacaactgc
cccggccgctgcatctgtcagcacctctcccccaccctgactctgctctgcgctaagact
ggtctgttgttcgtgccccccaccatcgaccgcaagacggtggagctgcgactcacagac
aacttcatcacgatcatccgcaggaaagactttttcaacatgaccagtttggtccacctc
actctgtctcggaacaccatcagccagatcacccctcatgcctttctcggactgcgggcg
ctgcgggcgctccacatggatggaaaccgcctcagcgtgataaagaccgaccactttaaa
ggcctcgtcaacctgcgacacctcatccttggaaacaaccagatccaccaggtggctccc
acctcgtttgatgagtttgtttccaccatagaggacttggatctttccaataacaacctg
cgcagccttccctgggaagccatagccagaatgaccaatattaacacgctcacactagac
cacaacctgattgaccacattggagcagggacttttacactgctcaccaagctggtccgc
ctggacatgacctctaacaggctgcagaagctgccgccagacagcttgttccagcacgct
caggtcctgtctgatgccaagggatccagctcctccactctggctgtgagctttggtggc
aaccctcttcactgtaactgtgagctgctgtggctccgcagactgacaagggaggatgat
ctggagacctgtgcctcgccggagcacctcatggacaagtatttctggtccatccaagag
gaggagtttatctgtgagcctcctctgatcacaaagcatctttccactaagccctatgtg
atggaagggcagggtgtgactcttaaatgcaaagcagtgggtgatccagatcctgatata
cactggcggtcgccagacggcaagctggtgcataataactcccgcactattctgtatgat
aatggcacccttgatattctcatcaccacgctgaaggacagcggggcatttaattgtgtt
gcgtccaatgccgcaggcatcgccacagctgctgttgagatcaacatgatccccttaccc
ttgtttgttaacaacacaggccacatgcgtgaggaccctggcctctcagacatcaccacc
tcctccaaatctggcaatgacaccaagggctacgacaagcaggacaggagggtgatggtc
accgagctgacctcctcctccgctgtgatccgttggccatctgaacgccatatccccggc
atcaggatgtaccagattcagtacaacagcacggcagatgatactttggtgtacagaatg
atcccatctaccagcaagaacttcttaatcaatgatctggccgcagggcgggagtatgac
ctttgtgtgctggcggtttacgacgacggcatcacatcattaacagccacacgtgtggtt
ggatgtgtgcagttccacactgccagtgaggtcagccagtgccgcttcatgcacagccag
ttcctgggaggcactatgatcatcattattggtggtataattgttgcttcggtactggtg
ttcattatcatcctgatgatccgttacaaggcctacagcggcccagaggacagtaagacc
aaggtcagttccagcatgcactcgcagaccaatggcagccagcagcggctccagcgctcc
gcctccaagcaaccgtctgatgagggccagcgggaagctcatgcacccaaagagtgcatg
gcgctggtactaagggtggacaatgagaagaaggaggatccagcatccactactgccatc
ttggaggtggagctgcctccgctaaatgcagacaagatgaagagaagaaccagcctggat
gcacagtgctctggccccccatctgaggacacgcagacggacagtagcctgacgggctcc
accatgtccctgtgtctcataggccccaacgctggcaccaaggaggctcccaggctcaag
gacaagaaaagtgccctggccaacatgggattgctccctaatgagctggcacgaactagg
cacagattctcttttgatggaggggattactccatttttcagagtcatagttacccacgc
agagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcgccgctc
gccaataggagagttacattcagcagcactgagtggatgctggagagcacagtctga
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integrated database retrieval system
