Epinephelus fuscoguttatus (brown-marbled grouper): 125889398
Help
Entry
125889398 CDS
T08419
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125889398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125889398
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125889398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125889398
NCBI-ProteinID:
XP_049433314
LinkDB
All DBs
Position
LG5:35603772..35613472
Genome browser
AA seq
767 aa
AA seq
DB search
MDDGQPTDKEEPTISQEQEGNGLDWLLRTDSSEIIPAPMDTNVLLARECDTTDDSINNKE
FTRERVFEAASQGDTTELVGLLDYLRVTKKKLTSPEFTDETNGKTALLKALMNLKDGKND
TIEVLLDIAEKTGDLENFINASYQDPCYNGQTALHIAIERRSFDHVKLLVQKGADVQAKA
NGKFFQRNAGLGFYFGELPLSLAACTNQPDVVAFLMENPYTRADVADKDLRGNTVLHALV
VIADNTDENTEMIAKMYDEILTQHNRLEKKTIVQLEEIENDKGLTPLKLAAKLGKIGLFK
HMLHREFVDEEMRPLSRKFTEWVYGPVHSSLYDLSSIDTNEKNSVLEIVVFGSEIPNRPE
MLQIEPLRSLLQNKWDRFASKLFLMNFLIYLAYLIIFTTVAFYRKEGQPPFPVDNVPLDH
VRCIGEVISVLGAVWFFYKAIIIFKRNPPTFKALYTTGFCDILFFLQAALILVCTVLYFC
GRKEYVGLLVLALALAWINVLYYSRGSKQMGMYSVMMERIILGDLLHFLCVYGVLLFGFS
AAVVAVIRDSPPACRKVRNGTLPRGSSPVVKTLKCKKSSYNDIRFATLEMFKFTIGMGDL
QFTDHVQYKEVFYILLISYIVITYILLLNMLIALMGYTVERVSKQIENIWNLQRASTILD
MEGTLPRCLVNKLHSGMSKMVRLKNEEDESRQFFRVEEINWKKWRSDVGVVQEEDPGESM
MKPLSREHTPRSRWHINPLLKRIHASHHQPQLSSVPDAQHNIKIQIH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggacgatggacagccaacagacaaagaggagcctacaataagccaagagcaagagggg
aatggtctggattggctcctcagaacggacagctcagagataattcctgcaccgatggat
accaacgtcttattagcaagagaatgtgataccactgatgacagcattaacaataaagaa
ttcaccagggagagagtctttgaagcagcatctcagggagacacaactgaacttgttggc
ctgcttgactacctacgagttactaaaaagaaacttaccagcccagaattcacagatgaa
actaatgggaagacggcgctcctgaaagcattgatgaatctgaaagatggcaaaaatgac
acaatcgaggtcctccttgacatagcggaaaaaactggagacttagaaaatttcatcaac
gcttcttaccaagatccttgttacaatggtcagacagcactgcacatcgccattgagaga
aggagctttgaccatgtgaaactgctggtccagaaaggagcagatgtacaagccaaagcc
aatgggaagttcttccagcgtaatgcaggactgggcttttattttggagagcttcctctg
tcactggctgcttgcaccaaccagcctgatgtcgtggccttcctcatggaaaacccttac
acaagagccgacgtggctgacaaggacttgcgaggaaacactgtcttgcatgccttggtg
gtcatagcagacaatacggatgaaaacacagaaatgattgcaaagatgtatgatgagatc
cttactcagcacaacagacttgagaagaaaacaatagtccagttggaagagatcgaaaat
gataaggggctgactcctctgaagttggctgccaagctgggcaagattgggctcttcaag
cacatgttacaccgtgaatttgtggatgaggagatgaggccgctgtccaggaagttcaca
gaatgggtctatggaccagttcactcttcactttatgacctgagttccattgacaccaat
gaaaaaaactctgtgttggagatagttgtcttcgggagtgaaattccaaatcgacctgag
atgctccagattgagcctctgcgcagtcttctccagaataagtgggacagatttgcttcc
aaattattcttgatgaatttcctgatttacctggcgtacctgatcatcttcaccactgtg
gccttctacagaaaagaaggacagccaccatttcccgttgacaatgtcccgcttgaccac
gttcgttgcattggcgaggtgatcagtgtccttggagcagtatggtttttctataaagcg
ataattattttcaagaggaaccccccaaccttcaaggctctatacacaactggattctgt
gacatactatttttcctgcaggcagcactcattttggtctgcacagttttgtacttctgt
ggacgaaaagaatacgttggactcctcgtgctcgcgctggcccttgcctggatcaatgtt
ctttactactcaagaggctctaaacaaatggggatgtacagcgtcatgatggaaaggata
atcctgggtgacctgttgcactttttatgcgtctatggggtcctgctatttggattttct
gctgctgttgttgctgtcatacgcgactctcctccagcttgtagaaaggtccgcaatggc
acactgccacgtggaagcagtcctgttgtcaagacattaaagtgcaagaagtcaagttac
aatgatatccgtttcgcaacactggaaatgttcaagttcactattggaatgggagacctg
cagttcactgaccatgttcagtacaaggaagttttctacatcttgctcatctcgtacatt
gttatcacttacatcctgctgctcaacatgttgatagctctgatgggctacacagtggaa
agagtctccaaacaaattgaaaacatctggaacctgcagagggcttctaccattttggac
atggaggggaccctgccaaggtgccttgtgaataagctgcactccgggatgtcgaagatg
gtgcgtttaaaaaacgaggaggacgagagtcgtcagtttttcagggtggaggaaattaat
tggaaaaagtggaggtcagatgtcggtgttgtccaggaggaggaccctggggaaagcatg
atgaagccactgtcccgtgaacacactcctaggtctcgatggcacataaatccattgttg
aagaggattcacgccagtcaccaccaaccacagctctccagtgttcctgacgctcagcac
aacatcaaaatacagatccactaa
DBGET
integrated database retrieval system
