Epinephelus fuscoguttatus (brown-marbled grouper): 125889529
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Entry
125889529 CDS
T08419
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125889529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125889529
03029 Mitochondrial biogenesis [BR:
efo03029
]
125889529
Membrane trafficking [BR:
efo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125889529
Others
Specific organelles associated proteins
Auto phagosome
125889529
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125889529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ATG16
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_NOL10_N
Cytochrom_D1
TFIIIC_delta
Beta-prop_RIG_1st
Chibby
Motif
Other DBs
NCBI-GeneID:
125889529
NCBI-ProteinID:
XP_049433556
LinkDB
All DBs
Position
LG5:924317..950376
Genome browser
AA seq
607 aa
AA seq
DB search
MAAVTVITDPAAVSQRGGRVAAPGRGGRSAETWKRHIMGQLKSRDLSQHDKFQDLIRFYT
QLLEKTSLAKGMLSCSVRRPSPGSGSISALLHQNNQLKKTTGELAYQVVELQQQIKIKEC
VLEQQHARLLAEERRLAGALDARQELQVRVEQVQEENGALKTAYDALLQRQRGAEQRLRE
EKVRGGHLLEDMIHLKQQAAARMNSRNERRSRAREANLQKELQNAARSKVTVDSCLSAPT
SRSTSPKTENHHESTDRGHTRLFRSASATSPRILTSIRELFDRKRRGHSVCSLEEDLMCP
VGICLSARVPARALQVLDAHEQGINAVRFSCSSDLLATGGTDRVIKLWEVRAGSLTHRAT
LDGSTEGITCVEFDPTGQRILAASYDKSALLWRLDDSVPKLTLTGHSRKVTAARFSGCLH
QVVTGSADRTIRLWDLQRAACVQEIEVSSYCSDLVCSENFIISGHYDSKIRVWDTRTISC
VQELPAQGKVTSLDISSDHRQLLSCCRDDCLQLADLRRRSNDRMCFRAEGFKCGSDSTKA
VISPDGCFLAAGSADGAVYIWNVSTGNLETRLPDKHSSSISAVSWSLSGEYVISVDKSRR
AVLWSDI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtcaccgtcatcacggatccagccgcggtgtcgcagcgcggcggtcgggtc
gcggctccgggacgcggcggcagatcggcggagacctggaagagacacatcatgggtcag
ctgaagagccgagacctgagccagcacgacaagttccaggacctgatccgcttctacacg
cagctgttggagaaaaccagtctggccaaaggaatgctgagctgctccgtcagacgtccc
tcccctggtagcggctccatctccgctctgcttcaccagaacaaccagctgaagaagacg
acaggagagctggcctatcaggtggtggagctgcagcagcagattaaaatcaaagaatgt
gttctggagcagcaacatgccagactgttggcggaggagcgtcggctggcaggtgcgttg
gatgcccgtcaggagctgcaggtgcgggtggagcaggttcaggaggagaacggggcgttg
aagacggcgtacgacgccttgctgcagcgacagagaggggcggagcagagactccgagag
gagaaggtcagagggggacacctgctggaggacatgatccacctgaaacaacaagctgct
gcccgcatgaacagccgcaacgaacgcaggtccagagctcgagaagcgaacctgcagaag
gagctgcagaatgctgcgaggtcaaaggtcacggtggacagttgtttgagcgctccgacc
tccagatccacgtctccaaagactgaaaaccaccacgagtccacagacagaggacacacc
cgactcttcaggtcggcgtcggcgacgtctccgaggatcctgacctccatcagagagctg
tttgacaggaagaggcggggccactctgtctgcagtctggaggaggatctgatgtgtccc
gtgggaatctgtctgtcggccagagtccccgccagagcgctgcaagtactggacgctcat
gagcaaggcatcaacgctgtgaggttcagctgcagctctgacctgctggccaccggagga
actgaccgggtcatcaaactgtgggaggtccgagcaggttcactgactcacagagcgacc
cttgacggcagcaccgagggaatcacctgcgtggagttcgaccccacgggtcagaggatc
ctcgccgcctcgtatgacaagtcggccctgctgtggcgcctggacgactccgttcccaag
ctgactctaacaggtcacagcaggaaggtgacggcggcgaggttcagcgggtgtctccat
caggtggtgacgggcagcgcggacagaaccatcagactgtgggacctgcagagagcagcc
tgtgtgcaggaaattgaagtgtcgtcgtactgcagcgacctcgtctgttcagagaacttt
atcatcagtggacactacgactccaagatcagagtctgggacacgaggacgatcagctgc
gtccaggagcttcccgctcagggcaaagtcacctcgctggacatcagctctgaccatcgt
cagctgctcagctgttgccgtgacgactgcctccagctggccgacctgaggaggcggagc
aatgaccgcatgtgtttcagagcggaggggtttaaatgtggcagcgacagcaccaaggct
gtgatcagtccagacggttgcttcctcgccgccggatcagctgacggtgctgtttacatc
tggaatgtctccaccggcaacctggagacccgcctacctgacaaacacagttcgtccatc
agtgctgtgtcctggtctctgtctggtgaatacgtcatcagtgtggacaagagtagacgg
gccgtcctctggagtgacatctga
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