Epinephelus fuscoguttatus (brown-marbled grouper): 125889641
Help
Entry
125889641 CDS
T08419
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125889641 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125889641 (cnot6l)
Enzymes [BR:
efo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
125889641 (cnot6l)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125889641 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125889641 (cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
type_II_gspD_N0
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
125889641
NCBI-ProteinID:
XP_049433625
LinkDB
All DBs
Position
LG6:42674131..42703079
Genome browser
AA seq
567 aa
AA seq
DB search
MPKEKYDPPDPRRCYTIMPAEEAASGKKSYWAELEISGRVRSLSSSLWTLTHLTALHIND
NNLSRIPPDIAKLPNLVYLNLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLKERDQMSS
TAVFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITSCDADIISLQEVETEQ
YYTMFLETLKERGYDGYFCPKSRAKLVSEQERKHVDGCAVFFKTEKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVNKDMFSSGMKPTQERQLILVANAHMHWDPEY
SDVKLIQTMMFLSELKSIAERASGSMATGSPTSDPSSIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYNECLTNFSCNGKNGKNGNSDGSITHSFQLKSAYDSNLMPYTNYTY
DFKGVIDYIFFSKTHMSVLGLLGPLDSQWLIDNNITGCPHPHVPSDHFSLLAQLELHPPP
PHSLNPLNGLHLPVHSSTAHETKTLRD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatccccgcagatgttacaccatcatgccagcg
gaggaggcggccagtgggaagaagtcttactgggctgagctcgagatttctggacgcgtg
aggagtctgagcagctcgttatggacgcttacccacctgacggcgctgcacatcaacgac
aacaacctgagccgcatcccgccagacatcgccaagctgcccaacctggtctacctgaac
ctgtcgtccaataagctccgcagcctgcccgccgaactgggcaacatggtctctctcagg
gaattgcttttaaacaacaatcttttacgagttctgccttatgaacttgggaggcttttc
cagttacaaaccttggggcttaaaggaaaccctttgtcccaagacatcctcaatctgtac
caggagccggacggaaccagaaagcttttgaactacatgctcgacaatctagcagtgcac
ccagagcagctcccccaaagaccttggatcactctgaaagagcgagaccaaatgagttcc
acagccgtgttcacggtcatgtgctacaacgtgctgtgcgacaagtacgccacgcgacag
ctgtatggctactgtccatcctgggccctcaactgggagtaccggaagaaaggcatcatg
gaggaaatcaccagctgtgacgctgacatcatcagcctgcaggaggtggagacagagcag
tactacactatgtttctggaaacactaaaggagcgcggctacgatggctacttctgccca
aagtctcgtgccaaactggtttctgaacaggagaggaaacacgtggacggctgcgctgtg
ttcttcaagaccgagaagtttactttggtccaaaaacacactgtggagttcaaccaggtg
gccatggccaactctgagggctcagaggtcatgctgaacagagtgatgaccaaagacaac
atcggggtggccgttctgctcgaggtcaacaaggacatgttctccagtggcatgaagcca
acacaggagaggcagctgatcctggtggccaacgcccacatgcactgggaccccgagtac
tcggacgtcaagttgattcaaaccatgatgttcctgtcggagctgaagagcatcgctgag
agggcctcgggctccatggcgaccggttcgccgacatccgacccgtcctccatccccatc
gtcctgtgtgctgacctcaactcgctgcccgactctggtgtggtggaatacctgagcaac
ggaggagtggccgagaaccacaaggacttcaaggagttacgctacaatgaatgtctgacc
aacttcagctgcaatggcaagaacggcaagaatggcaactcagatgggagcatcacacac
agcttccagctgaagagcgcctacgacagcaatctaatgccttacaccaactacacatat
gactttaagggcgttatcgactacatcttcttctccaagacccacatgagtgtcctgggc
ctgctgggaccgctggacagccagtggctcatcgacaacaacatcaccggctgcccccac
ccccacgtcccctcggaccacttctccctgctggcccagctggagctgcaccctcccccg
ccccactcgctcaaccccctcaacgggctgcacctgccagtccacagcagcactgcccat
gagaccaagacgctcagagattaa
DBGET
integrated database retrieval system
