KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125889735
Entry
125889735         CDS       T08419                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125889735 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:efo03041]
    125889735 (sf3a1)
Spliceosome [BR:efo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125889735 (sf3a1)
 Complex B
    125889735 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    125889735 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 125889735
NCBI-ProteinID: XP_049433778
LinkDB
Position
LG6:15799560..15805310
AA seq 782 aa
MPPGPVQIVQPEPNNKNDAPSEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQAMQQSQQLPQ
KVQSQVIQETVIPKEPPPEYEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKREAENPREVMDQVRYRVEWA
KFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDEDDEREVRGEGQPSQPDQDTQVQDMDEGSDDDEEGMKAP
LPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKIQASKMQEHM
RIGLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSK
PSEIHHQPPMPTPITLPKPSPPMTVPRPPPSVAPVRTTLLSAVPVIPRPPVAPVVRLAPG
QVIASMPPMIPAPRINVVPMPPSAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPPAH
PPPPHEDEPVSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTV
PLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMSNGSIIHLALKERGGR
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcaaattgttcagccggagcccaacaacaagaatgatgcacca
tcagaagaaaccccggccactaaacccatcgttggtatcatatatccacctcctgaggtc
cgaaacatagttgacaagaccgccagctttgttgccaggaatggacccgagttcgaagca
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaaccctaatgacccc
taccatgcctactaccgtcacaaggtcaatgaatttaaggagggcaaagcgcaggaacca
tctgcagccgtgcctaaggttatgcagcaggccatgcagcagtcgcaacagcttcctcaa
aaagtgcagtcacaggtgatccaagagaccgtcatccccaaagaaccacctcctgagtac
gagttcattgcggatcctccatcaatctcagcatttgatctggatgttgtgaagctcact
gcgcaatttgttgctcgcaatggtcgccagtttcttacacagctcatgcagaaagaacag
aggaactaccagtttgactttctgcggccacagcacagccttttcaactacttcaccaaa
ctggttgagcagtacactaagattctgatccctcccaaaggtcttctgaccaaactgaag
agagaggcagagaatccaagagaggttatggaccaggtgaggtaccgtgttgagtgggca
aagttccaggagcgtgagagaaagaaggaggaggaggaaagagagaaagaacgggtggca
tatgcccaaattgactggcatgactttgtagtggttgagacagtggatttccagcccaac
gaacaaggccacttccccccacctacgacaccagaggagcttggcgctcgcatcttaatc
caagagcgctatgagaagtatggagagagtgaggaggtggagatggaagttgagagtgag
gatgaagatgatgaacgggaggttaggggtgaaggccagccctcacagccagatcaagac
acgcaagtgcaggacatggatgagggatctgatgatgacgaagagggcatgaaggctcca
ctgccaccagacaaccctatgccacccccgctgcctccaactccagaccaggttattatt
cgcaaagactacgatcccaaagcttccaagcctcagccgtcagttgctgctccagatgag
tacctcatctcaccaatcactggtgagaagatccaagctagtaagatgcaagagcacatg
cgcattggtctgctggatccacgctggctggagcaaagggaccgcagcatcagagagagg
cagactgaggatgaggtctatgctcctggtctggatattgagagcagcttgaaacaactg
gctgagaggcgtactgatatctttggtgtggaagagacagccatcggtaagaagattggt
gaagaagaaatccagaagccagaggagaaggttacttgggatggccactcaggaagtatg
gctcgtacccagcaggcagcacaggccaacatcaccctgcaagagcagatcgaagccatt
cacaaggccaaaggactggtgggagaggatgacactaaggagaaaattggcccaagcaag
cccagtgaaattcatcatcagcctcccatgcccactccaatcactttgcctaaaccaagt
cccccaatgacggtgcctcgcccacccccctctgttgcaccagtacgcaccactctcctg
tccgctgtacctgtaattccaagaccacctgtggctcctgttgtgcgccttgcaccagga
caagtcatagcatcaatgcctcccatgattcctgctccccgcatcaatgtagtccccatg
ccgccatcagcacctcacatcatggcccccagaccacctcccatggttgttccagctgca
ttcgttcctgctcctccagtacctcaacccccgagctctgctcctgcaccaccagcccac
ccacccccacctcatgaagatgagccagtcagcaagaagatgaagacagaggacaacctt
attccagaggaggagttccttcgtaggaataagggtcctgtggcagtcaaagtacaagtc
cccaacatgcaggacaagaccgaatggaagctgaatggccaagtgctgaatttcactgtc
ccactcacagatcaggtgtctgttattaaagtcaaaattcatgaagctacaggcatgcca
gcagggaaacagaagttacagtatgagggcattttcatcaaggattccaactccctggct
tattacaacatgagcaacggctcaatcattcacttggcactgaaggagagaggtggaaga
aagaagtga

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