Epinephelus fuscoguttatus (brown-marbled grouper): 125889744
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Entry
125889744 CDS
T08419
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125889744 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125889744 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125889744 (clip1a)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125889744 (clip1a)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
125889744 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CCDC39
CC149
Motif
Other DBs
NCBI-GeneID:
125889744
NCBI-ProteinID:
XP_049433800
LinkDB
All DBs
Position
LG6:23902682..23932193
Genome browser
AA seq
2231 aa
AA seq
DB search
MSTAKPSGIKGPSKIARPPGTAAPKTNPSTAGAKAAAADKSAASASGGDDQGAGENFEIG
ERVWVNGNKPGYIQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP
SKLSRTEGEANGTQTAPTSRAASPTPSVGSVASHTPTTKSTLPSTTTATKKASTTTPATP
ATPATPSSNLARTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAK
GEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKV
VATPSGLKRSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEK
QQHIEQLMAERDMERAEVAKATGHVGEMEQEISLLRDDREQMEAKMDHLRALVEAADKDK
VELLNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQ
RELEDTRVATVSERSRIMDLERDLSQRTREVADLQLRLGTQQGSEDSDSALSPLLEEINS
LRDQLASQEAKQQEELANYKEKLEAQEKTHSEAAAQLQAASVRLSGDNEQLQMRLSQAEK
ENADTIELWRSKLESAIASHQQAMEELKVSFSKGAGAQTEELIETKSALERLKMEHKLAL
EEAGAKHEGDVAACAREMQALKAQLSSLTEDKERLEELLRSSVEKTEEQHLVEMEDVLGK
LHAAEVRVKELEEKEEMLTQQAQDKDRETKEQMSEMVALHSQIAQGNQELVALKSQLEVA
QSQGTVQGAKVSELSSQLEAQKQEVLSLQQSLTTVQKEKDALGQELGDLKQKSAEEQTKS
SNTMQETLEKLSQKEEQCTSLTTESESLKSQLAGLERKLKAADEKLEQLSKDKSKLENDI
SDMMKTSGDSSAQLTKMNEDLIQKERRLEELQSQLSEEKEKVAHSNEQLQQEQSRKEQEL
KETRETHQSELSGLQEKITNLEKAVKQGEALVEELKASKEKSLSQASELHAKELEALQSE
ADKLKQELSSSKDKTKDLEKLVSELQPYKEQAQCLSAELDSSKHDVENMSKKLEKQSLDL
ESKCKEFEDVKAEKGKLEKQLSEAQTKLSALEITHQELSVQHEELRVTRDKLSKRQEELL
ANNKSSDEEKTSLNNELQKLRDLLQEVQTENKNLKHAKGEQQVQIEELQKQNAEKNDLLL
KHQQDIQQIEAKKKQLHEDYENVCKEKSRLENDLNESRSKLTSEKDNLILERDSARNAKK
SLDAKNAELQAKLKSLNLEKEDLTMKNTQLQALTETLTKEKVEMSSEISAAVSDKKSLET
MKEELQNKLSVTKKDLESSARECQELKASKMSLTQMLEEFKTSSQVTDSERLQLLQEKED
LLAIQRKVCNEKEELLREIEELKEKLQVSAEQLSESNEKLKEALSSFEQEKEAFRLQSSE
SEMALHVIRKEKMSLDSALEQQKMDYERLAGEKGELEEKLTKAISDNDTLSLERDKLAGD
IRTSKDQLDSYTRANDLFAEEKSHLTTMLEETKRQREEVAAEMTSVKREKADLQNEVQKL
NSDIEVLKKGKNELVQEQSKLKTDLEKANSELSQQVDSLTKDCQRLQSLQTEADNKAQSS
QKENQGLLQEIQELKCQIESVSGAKHLLETQLQAESTERNKVISDKDGLSKQIEELQKTL
SKVKQENKDISSNLKNADEQKKSFMMDMEALKTQLKQQEQESSQLTKDKEQLLSKLEETG
KQVTLLTTEKVDLLAGQCKLEQSFSSLQTSQESWLAERSRLLGEIEKMHASQKQLEADVK
GLHTDKELLEKQCKSAVAEASASAVVKEEISSSISNLTAQKDALQVERDEATQQVKQLQS
QLKNAISKQLEVTEASGKTAEALEQLTKEKASLMQEKNEAQSLLEELRSSKQKMETQLKS
LEKNNSKSQEDLNVSKELLSIETQRTESLSKEIEELKEAVSVKTQSLETLQEENNKLTQE
LDKNHKGQSDLQKLKDEYSKLKKQLKQSESTLKEQFDKEKAALQQSIYKNSALISEKDQQ
VENLKSELAVLRGESASVKTLQGTIQALERDKANLQDRVQRLEKDLATGPDTINKSSGDA
VLDQLREDKETAESQIEFLNSVIVDLQRKNEELKDKLEKMAAAALNGNNPSELDNYDDSH
DKKKKPPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTTYHGNKGEERPYCDICEVFGH
WTDACNDDQTF
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccaagcccagtgggatcaaagggcccagcaagatagctaggccacctggg
acagcagcccccaagaccaaccctagcacagcgggcgctaaagctgctgcggccgacaaa
tcagctgcaagtgccagtggaggagatgaccagggtgctggggaaaactttgagatcggg
gagcgagtatgggtgaatgggaataagccgggctacattcagtttttaggagaggcacag
tttgccccaggacagtgggcaggaatcgttctagatgagccaatcgggaagaatgatggg
tcggtggcaggggtgcgctacttccagtgtgaacccctgcgaggaatatttacccgccca
tcaaagttgtctcgcacagagggcgaggctaatggaactcagacggcacccacctcccgc
gcggcatcacccaccccttcagttgggagtgtagcctcgcatacacccaccacaaaatca
acattaccctcaactaccacagcaaccaagaaggcatccactactacgccagctacacca
gctacaccagctacaccatcctccaacctcgcacgcacgaatagtgaatctgtctccaac
ctctctgagactggatcagtcaagaagggggagagggaactgaagatgggtgaccgagta
ttggttggtggtaccaaggcaggagtggtacgtttccttggagaaacagattttgccaaa
ggcgagtggtgtggcgtggaattggatgagcccttaggaaagaatgatggagcagtggca
ggcacaagatatttccagtgccaacccaagtatggcttatttgctccagtgcacaaagtc
acacgcattggcttcccctccacgacgccagccaaagcaaaaacaaccgttcggaaagta
gtggcgacaccatcggggttaaagcgaagccctagtgcctcctccatcagtaccatgagc
tctgtggcatcctctgttagcgctaagcccagccgcacaggcctgctaacagagacatca
tcacggtataatcgtaagatatcgggcaccacagccctgcaggaggcgctgaaggagaag
cagcagcatattgagcagcttatggctgagagggacatggagagagccgaggttgccaag
gccaccggccatgttggagagatggagcaggaaattagcctgctcagggatgatcgggag
cagatggaggccaagatggatcatttacgtgccttggtagaagctgcggacaaagacaaa
gtcgagctactgaatcagctggaggaggagcgtaggaaggtggaggaccttcagttccgc
gtagaagaagcttgcattaccaaaggagacctggagacgcagaccagactggagcatgcc
cacattaaggagcttgaacagagcctactctttgaaaagaccaaagctgagaaactccaa
agagagttagaagacactagggttgctactgtgtcggaaagatcccgaattatggacctt
gagagggacctttcacagcgaacaagagaggtggctgacctgcagctgcgtctcgggacc
cagcagggttctgaggactcagactctgctctttctccccttctggaagagataaactct
ttgagggatcagttggcttctcaagaggctaagcagcaagaagagctggcaaactacaag
gagaagctagaagctcaagaaaagacccacagcgaggcagctgcccagctacaggctgca
tctgtaaggctctctggtgacaacgaacagttgcagatgcgcttaagccaggctgagaag
gagaatgctgacactattgaactgtggcgttccaagttggaatctgctattgcctctcac
cagcaagccatggaggagctgaaggtgtcattcagcaaaggcgcaggtgcccagacagaa
gaacttattgaaaccaaaagtgcactagagaggctgaagatggaacacaagttggctcta
gaggaggctggagccaaacacgagggtgatgtcgcagcctgcgctcgggagatgcaggca
ttgaaggcacaactgtcgtccttgactgaggacaaggagcgactggaggagttgctccgg
tccagcgttgaaaaaacagaggagcagcaccttgtggagatggaggatgttcttggaaaa
cttcatgctgctgaagttagggtgaaggagcttgaggagaaagaagagatgttgacacaa
caggcccaagacaaggacagagaaaccaaagagcagatgtcagaaatggtggctctgcac
agccaaatagcacaaggtaaccaggagcttgtggccctgaagagtcaattagaagtggct
caaagccaagggaccgtccagggtgcaaaggttagtgaattgagctcacagttggaggcc
caaaagcaggaagtcctctctttacagcagagtctgacaactgtgcagaaggagaaggat
gccctgggacaggagctgggagacctgaaacaaaagtcggctgaggagcagactaaatca
tcaaacactatgcaagaaacacttgagaagctcagtcagaaggaagagcagtgcacgtct
ttgaccaccgaatcagagtctctaaaaagtcaacttgctgggctggagaggaagctcaag
gccgcagacgaaaaacttgagcagctttctaaggataaaagcaagctggaaaatgatatt
tcagacatgatgaagacctctggtgatagttctgcacagctgaccaaaatgaatgaagat
ctcatacagaaagaaaggagacttgaggagttacagagtcagctatcagaggagaaggag
aaggttgcacattcaaatgaacaactccagcaggaacagtcccgcaaagaacaggagctg
aaagagaccagagaaacacatcagtctgaattgagtggccttcaggagaagatcactaac
ttggagaaggctgttaaacaaggtgaggccctggttgaggagctgaaggcttcaaaagaa
aaatccctctctcaggcctcagagctccatgcgaaggaacttgaggcgctgcagagtgag
gctgacaagttgaagcaggagctctcttcctccaaggacaaaaccaaggaccttgagaag
ttggtatctgagctgcagccgtacaaggaacaggctcagtgtctttctgctgagcttgac
tcctccaagcatgatgttgaaaatatgtccaaaaaactggaaaagcagagtctagatctg
gaaagtaagtgtaaagaatttgaggatgttaaggctgagaaaggcaaactggagaaacag
ctttcagaggcgcagactaagctctctgcccttgagattactcaccaggagctctcagtc
cagcatgaagagctgcgagtaaccagagacaagctttcaaaacgtcaagaggaactactg
gctaacaacaagagctcagatgaagaaaagacttcattgaacaatgagttgcagaagctc
agagatcttcttcaggaagttcagactgaaaacaaaaacctgaaacatgctaaaggtgaa
caacaggtccaaattgaggagcttcaaaaacaaaatgcagagaagaatgacttgctccta
aagcatcagcaggacatccagcaaattgaggctaaaaagaagcagctacacgaggattat
gaaaatgtctgcaaagagaagagccggctcgaaaacgacctcaatgaaagcaggtcaaag
ctcacaagtgagaaggacaatcttatcttagagagagactctgctagaaatgccaaaaaa
tctcttgatgcgaagaatgctgagttgcaggcaaaacttaaatccttgaacttagaaaaa
gaagacctcacaatgaagaacacccagctgcaggccctcacagaaacactgacaaaagag
aaagtagagatgtcctctgaaatcagtgctgctgtgtcggataaaaagagccttgagacc
atgaaggaggagctccaaaataagctcagtgttactaagaaagacttggagagctctgcc
cgtgaatgtcaagagctaaaagcctccaaaatgagcctgacccagatgcttgaagagttt
aagacaagcagtcaggtgactgattctgagaggcttcagcttctgcaggagaaagaagac
ttactcgcaatccaaagaaaagtctgtaatgagaaagaagagctccttagagagatagaa
gaattaaaagagaagcttcaagtctctgcagaacaactgtcagagtctaacgagaaactt
aaagaagcattatcatcttttgagcaagagaaggaagcatttcgccttcagagttctgaa
agtgagatggctctacatgttatacgaaaagaaaagatgagcctggattcagcactagag
cagcagaaaatggattatgagcgtttggcaggggagaagggagaattagaggagaagctc
acaaaagccatatctgacaatgatactctttctcttgagcgcgataagctagctggtgac
atccgaacaagtaaagaccagttggatagttacaccagagctaatgacctctttgctgaa
gagaagtctcacttaacgacaatgctagaggaaaccaaacgccaaagagaagaagttgca
gcggagatgacgtctgtgaaacgagaaaaagccgacttacaaaatgaggtgcagaaactc
aactctgatattgaagttcttaaaaagggcaaaaatgaactggttcaggagcagagtaaa
ctaaaaacagatcttgagaaggcaaattcagaactttctcaacaggttgatagccttaca
aaagactgtcagcgtctgcagtcgttgcagactgaagctgacaacaaagcacagtcctca
cagaaagagaaccagggtctgcttcaggagatccaggaattaaaatgtcagattgaatca
gtgtcaggggccaagcaccttcttgagacccagctacaggccgagtccactgaacggaat
aaagtcatatctgacaaggatggtctctccaaacaaattgaggagctgcagaaaactttg
tccaaagttaaacaggagaataaagacatttcttctaaccttaagaacgccgatgagcaa
aagaagtcttttatgatggacatggaggctttgaaaacacaattaaagcagcaagagcaa
gaaagcagtcagctgacaaaagataaagaacagctgttatctaagcttgaggagacgggc
aaacaggtgaccttgctgaccacagagaaggtagaccttttagctggacagtgtaaattg
gagcagagcttttcttctctccagacaagccaagaaagttggctcgcagaacggtcaaga
ctcctgggagagatcgagaagatgcacgctagccagaaacaactagaggctgatgtcaag
ggccttcacaccgataaagaacttttggaaaagcaatgcaagagtgctgttgcagaggca
tcggcttctgccgttgtgaaagaggagatttcctccagcatctctaatctaacagctcag
aaggatgccctgcaggtggagagagatgaagccacccagcaagtcaagcagctgcagtcc
caactaaaaaatgccatttctaagcagcttgaggtgacagaggcctccggcaagactgct
gaggctctggaacagctgacaaaagagaaagccagtttgatgcaggagaagaacgaagcc
cagtctttgctggaagagctccggagctccaagcagaagatggagacacagctgaaatca
ctggagaaaaataattcgaagtcccaagaagatctgaatgtatctaaagagctgctttcc
atagagactcagaggactgagagtctgagcaaggagattgaggagcttaaagaagcggtt
tctgtgaagacgcagtccctggagacgctccaagaggagaacaacaagctgactcaagag
cttgataaaaatcacaaagggcagagtgatcttcagaagctcaaggatgagtactcaaaa
ctcaaaaaacagctgaagcaaagtgagagcaccttgaaggagcagtttgacaaggagaag
gctgccctccaacagtccatctataaaaacagtgccttaatttcagaaaaggaccagcag
gtggaaaacctgaagagcgagctggctgtactgcgtggggaaagtgcctcagttaaaaca
ctgcagggtacaattcaggccttagagcgggacaaggctaatctacaggaccgtgttcag
agactggagaaggacctggctactgggcctgacaccatcaacaagtcctcaggtgatgca
gttttggaccaactaagggaggataaggagacagcagagagtcagattgagttcctgaat
tcagtcattgttgacctccagaggaaaaatgaggaactcaaggacaaattggagaaaatg
gcagctgctgctctgaatgggaataatccaagtgagctggataactatgatgatagccat
gacaagaagaagaagcctcccccaaggctgttctgtgacatctgcgactgcttcgacctc
cacgacactgaggactgtcccacacaaatgcagatgcccgactccccaccacacaccacc
taccacggcaacaagggcgaagaacggccctactgcgacatctgtgaggtctttggccac
tggaccgacgcctgtaatgatgaccagaccttttaa
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integrated database retrieval system
