Epinephelus fuscoguttatus (brown-marbled grouper): 125889920
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Entry
125889920 CDS
T08419
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04142
Lysosome
efo04144
Endocytosis
efo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125889920 (cltcl1)
04142 Lysosome
125889920 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125889920 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125889920 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125889920 (cltcl1)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125889920 (cltcl1)
Exosome [BR:
efo04147
]
Exosomal proteins
Proteins found in most exosomes
125889920 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
125889920
NCBI-ProteinID:
XP_049434168
LinkDB
All DBs
Position
LG6:32183509..32219932
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTVA
LVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EEIFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAAITMMS
HPTDAWKEGPFKDIIAKVANVELYYKSLSFYLDYKPLLLNDLLTILSPRLDHSRAVNFFS
KVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFATKVTVD
KLEEADSKRKTEEEVTEPQPIVFGQQLMLPPSPAPVAPQQAYPGYGYPTAPAGFPAAPAY
GFNM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggcgtg
aacccagccaacattgggttcagctatctgaccatggagtcagacaagttcatctgcatc
agagagaaggtgggtgagcagaatcaggtggtgatcgtggatatgtctgaccccaccaac
ccgatcaggagaccgatctctgccgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagctgccaagacgctgcagatcttcaacattgagatgaagagtaaggtgaag
gctcacactatgacagaagaggtcatgttctggaaatggatatcggtaaacaccgtcgct
ttggtgacggatacagctgtctatcactggagcatggagggggattcccaacccaccaaa
gtattcgatcggcacgccagtctggcgggatgtcagatcattaactatagaactgatgaa
caacagaagtggctgctgctgatagggatttctgcacagcaaaaccgcgtagttggggcg
atgcagctgtattctgttgacaggaaagtgtcccagcccatcgagggccatgctgctgcc
ttcggggagttcaaagtggagggaaatgccaaaccgtccaccctcttctgctttgctgtg
cgctcacaggcagggggaaagttacacatcattgaagttggtcagccagctgcaggaaac
cagccttttgctaagaaagcagtggatgtgttcttccctccagaggcccagacagacttt
cctgtagctatgcagattggtagtaagcacggtgtaatatatttgatcacaaagtatggt
tacattcacctgtatgacctggagtctggagtgtgcatctacatgaaccgaatcagtgca
gagaccatctttgtaaccgccccgcatgaagccacctcaggaattattggggtcaacaag
aaaggacaggtgttgtcagtgtgtgtcgaggaggaaaacattgtcaactacgccaccaat
gtcctgcagaaccctgatcttgccctgaggatggccgtgcggtcaaaccttgccggggct
gaggagatttttgccaggaagttcaacactctatttgcccagggaagttattcagaggct
gcaaaggttgctgcatcagcacccaagggcatcctgcggacagcagagaccatccgaaag
tttcagagtgtcccggcccagccaggtcaggcctctccactgttgcagtactttggtatt
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtcctg
cagcagggccgcaagcaactactggagaaatggctgaaggaggacaagctggagtgctca
gaggagctgggggacctggtgaaggcctctgaccccaccctcgctctcagtgtgtacctc
agagctaacgtccccaacaaggtcatccagtgcttcgctgagactggccagttccagaag
atagtgctgtatgctaaaaaggtcggctacaccccagactgggtgtttttgctgagaaat
gtgatgcgcgtcaatccagaccagggactgcagtttgcccagatgctggttcaggatgag
gagccactggccaacatcaaccagattgtagatgtgttcatggaaggcaacctgatccag
cagtgcacctctttcctgttagatgctctaaagaacaaccgccccgccgaagggcattta
cagactcgtctgcttgagatgaacctcatacatgcccctcaggtagcagatgcaatcctg
gggaatcagatgttcacacactatgaccgtgcccatgttgctcagctgtgcgagaaggca
ggtctgctgcagcgggctcttgaacactacaccgacctgtatgacatcaaacgagccgtg
gtgcacacacatctgctcaaccccgagtggctggtgaacttctttggctctttatcagta
gaggactcgttggagtgtttaagggccatgttgtcagctaatatcaggcagaacctgcag
ctgtgtgtccaggtagcgtccaagtatcatgagcagctggggactcaggcgttagtggag
ctctttgaatccttcaagagttatgagggcttgttttacttcctcgggtcgattgtgaat
ttcagccaggagcctgatgttcacttcaagtacatccaggctgcgtgcaaaacaggccag
atcaaagaagtggagagaatctgcagagagagcaactgctatgacccggagagggttaaa
aactttctaaaggaggccaagctaacagaccagcttcctcttatcattgtgtgtgatcgc
tttgacttcgtccatgacctggtcctctacctctaccgcaacaatctacagaaatacatt
gaaatctacgtacagaaagtgaatcccagtcgtttaccggtggtgataggtggactgttg
gatgtcgactgctccgaggatgtcattaagaacctgatcatggtggtcagagggcagttt
tccactgatgagctggtggaggaggtggagaagaggaacaggttaaaacttctgttgcca
tggctggagtcccgtatccacgaaggatgcgaggagccggcgacccacaatgccctggcc
aaaatctacattgacagcaacaacacacctgaacgcttcctgaaggagaacccgttctat
gacagcgctgtggtcggaaaatactgcgagaagagagacccccacctggcctgtgtggcg
tatgagagaggacagtgtgacctggatctcatcaaagtgtgcaatgagaactcgttattt
aagagtgaggctcgatatctggtgcggcggaaagatccagagctttgggcgaatgtgtta
gaagagaacaaccccttcagaagacaactcatcgaccaggtggtgcagacagcactgtca
gagacccaggacccggaagaggtgtcagtcacagtcaaggccttcatgactgcagacctg
cccaatgagctcatagagctgctggagaagatcgtactggataactctgtcttcagtgag
cacagaaatctccagaacctgctgattttgacagccatcaaggcggaccgcactcgtgtg
atggagtacatcaacaggctagacaactacgatgctccagacatcgctaatatagccatc
agcaatgagctctttgaagaagcgtttgccattttcaaaaagtttgatgtcaacacctca
gccatacaggtattgatagagcacatagggaacttagatcgtgcctatgagtttgctgag
cgctgtaatgagcctgcggtgtggagccagttagccagagctcagctacaaagggacctg
gtcaaggaggccattgactcgtatatcaaagccgtcgacccttcagcatacatggaggta
gtcaacgcagccagcaagaacaataactgggaagacttggtaaaattcctccagatggct
cgaaagaaagccagagagtcatatgtggagacagagctgatctttgctttagctaaaacg
aaccgtctggctgagctggaagagttcgttagtgggcccaacaatgctcacatacagcag
gtgggcgatagatgttatgatgagggtatgtatgaagcagccaagctcctgtacaacaat
gtgtccaactttgctcgtctcgcatcaacgcttgtccacctgggagagtaccaggcagct
gtggacagcgccaggaaagccaacagcacacggacatggaaggaggtgtgttttgcgtgt
gtggatggcgaagagttccgtctggcacaaatctgcggccttcacattgtgatccacgct
gacgagttggaggacctgatcagctactatcaggaccgcgggtactttgaggaactcatc
gctctgttggaggctgcgctgggtctggagcgggcacacatgggcatgttcactgagctc
gccatcctctactcaaagttcaaacctcagaagatgagggagcacctggagctcttctgg
tccagagtcaacatccccaaggtgctgcgagcagcagagcagtctcatctatgggcagag
ctggttttcctttacgataaatatgaggagtacgacaacgctgctatcacgatgatgtct
catccaacagatgcgtggaaagaagggccgttcaaggacattattgcgaaggttgccaat
gtggagctgtactataaatctctttccttctacctggattacaaacccctcttactgaat
gacctgctgaccattctgtctccgcggctggaccacagccgggctgtcaactttttcagc
aaggtgaatcagctgaagttggtcaagccttacctgaggtctgtccagaatcacaacaac
aagtccgtcaacgaagccctcaacaacctgctgacagaggaggaagactaccagggcctg
agagcgtccatcgatgcctacgacaactttgataccattggcctggcgcagaggttagag
aaacacgaactgattgagttcagacgtatcgctgcttacctgtacaagggcaacaaccgc
tggagacagagtgtagagctctgcaagaaggacaaactctacaaggatgccatgctgtac
gctgcagagtctaaggacgcagaactggcagagactttgctccagtggttcctggaggag
ggcaggaaggagtgcttcgcggcctgcctgtttgcctcctatgacctgctgcaccctgac
gtggtgctggagctggcctggagacataacatcatggacttcgccatgccgtacttcatc
caggtcatgagggagtacctgacaaaggttgatgagtttgcaacgaaggtgacggtggac
aaactggaggaggcagacagcaaaaggaaaactgaagaggaggtgacagagcctcagccg
atagtgtttggccagcagctgatgttacccccctctcctgctccagtggctcctcagcaa
gcgtacccaggctacggctaccccaccgctcctgcgggcttccctgctgcgcctgcttat
ggcttcaacatgtag
DBGET
integrated database retrieval system
