Epinephelus fuscoguttatus (brown-marbled grouper): 125889959
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Entry
125889959 CDS
T08419
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125889959 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125889959 (lsm1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125889959 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
125889959 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125889959
NCBI-ProteinID:
XP_049434224
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All DBs
Position
LG6:complement(16067008..16072054)
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AA seq
133 aa
AA seq
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MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKVKMQALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacggcaagcctcattgacgacatcgacaagaagcacctggtg
ctgctccgagatggcagaacacttatcggttacctcagaagcattgaccagtttgccaat
ttagtttttcatcagacagttgagcgcatccacgtggggaaaaaatttggagacattccc
agaggaatattcatagtgagaggagagaatgtggtgctgctcggagagatagatgtggac
aaaccctgtgacacagtcctgcagcaggtctccatcgaagagattctggaggagcagcgg
ttgcagcagcaagccaaacaggagacggagaaagtcaaaatgcaggccctgaaggaccga
ggcctttccatcccaaaagctgacaacttagacgaatactaa
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integrated database retrieval system
