Epinephelus fuscoguttatus (brown-marbled grouper): 125889972
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Entry
125889972 CDS
T08419
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125889972 (lrp13)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125889972 (lrp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_LRP2
DUF5050
EGF_3
hEGF
DUF1180
Motif
Other DBs
NCBI-GeneID:
125889972
NCBI-ProteinID:
XP_049434253
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All DBs
Position
LG6:10510739..10526179
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AA seq
1365 aa
AA seq
DB search
MGGCLFLCLVLLQLSGPLRVVSAESTPLKCGLGSKMCKDGSECVLYSHVCDGEHDCKDGS
DEEDCASGCNEDQFQCAHGKKCIDKDQVCDGIPHCQDRSDEMQCAQQTEGCFHHCDNKSR
CIPANFICDGEKDCSDGTDEASCEDQEEDRHEREDGTSPLSVPAPSASSSTPVKCPLGSK
PCKDNKECVLYNHVCDGEKDCADGSDEEECLSACETDQFQCAHGKKCIEQSQVCDGVPQC
QDRSDELGCAKRMEGCAHQCDDKSRCIPNSFLCDGERDCLDGSDEANCVDGACSATEFKC
TSGQCVSDTMLCDGHPDCWDRSDEESCTNAPVCPTKHRCPQSKECLVQEWICDGDQDCKD
GTDEKDCPVAPLNCGEFQWLCKSKSKCIPTAWRCDGMKDCDDGSDETECGMVTCLPHQFQ
CGSQECLDPVQVCNSITNCADGSDEGGSCQITCADADNSRCSQSCYSTPQGTRCHCAAGF
TLMKDRLTCVDIDECEGQSSGVCSQLCINTPGSYQCDCHPGYIMEADGHHCKITGEPFLL
SSVQTDLFMFGLRSGSLDVLSSSAKKAILSLDYDWRDQRVFWVSLDTESIRWSSLDQKTT
GTLIKGVRADSVAVDWLGRNLYWIDGVNSQIVAIRLTTDTVKSLDHSVILDEDLDQPRSL
ALLPQKGLMFWTEIGNVVKIERAGMDGSERKAVVNSSLGWPGGVAVDTISDRVYWTDERL
RAIGSATLDGDDIQILQMKETTNPFSLAVFNDMLYWSDAKKRVVLAAHKISGKNQQVLLK
RPRQPFGVKIIHPLLQMGIESPCEKIDCSHMCVLAPGPKAVCKCPSGLLLAEDGLTCSSS
VNSAFLLMLSPSTVTQIYLQSRHTAAELKGWPEHLALQVPSVNEAAIIDYSLRDHTLFLT
DDGTTSLSSFKLRDSDLSSQGQLLKLLGNTITAMALDWVTLNIYWSSDKQPRLQVTSITG
AHTAVLIKDGIGRVESIALHPPSGRVCFTNVGLQGTGTVATVECANMDGAGRSVVWKDAV
QPTSLVFSSTGDTIYWADMDLGTIGTVQLDGSGYRELKTGDGLAAVALSDDALLWMTVSD
KTRLWYSDEQQQNKLWFEVGTEVVSLKAFSKSSQTGSNQCTENNGNCQHLCLATPEGRTC
KCAHDYIPVNATHCGPEQSCPGGTRPCLDQLSCQPVEKFCDKHIDCYDHSDENCVTLKQR
SGAKVLAPTQPHSSSPPRPSPPSPLSEDTGPNTTLNVSSQLMNLDAQQCSQKRCSGNGRC
VEVNGETACVCALGYSGDSCQDNLLKTMQGPIIYGAVGLCAGVVVIAVMAVVVKRKKSAN
TRRASPAAVKETCMTDLENNTETSPSTQAASADTDKPEEAVSSVD
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgggtggatgtttgtttctctgtctagtcttattgcagttgtcagggcccttgcgagtt
gtttcagctgaaagcactcctttgaagtgtggcctgggctctaaaatgtgcaaggatggc
tcagagtgtgtcctctacagccatgtttgcgatggagagcatgactgcaaggatggttca
gatgaagaggactgtgcatcagggtgcaatgaagatcagttccagtgtgctcatgggaaa
aaatgtatagacaaggaccaggtgtgtgatggtatacctcactgtcaggaccgttctgat
gaaatgcagtgtgcacagcaaactgagggctgttttcaccactgtgacaacaagagtcgt
tgcatacctgcaaacttcatttgcgatggagagaaggactgctcggatggcacagatgaa
gccagctgtgaggaccaagaggaagacagacatgagagggaagatgggaccagtccactc
tctgtgcctgctccctccgccagctcatccactcctgtgaaatgtcctttgggctctaaa
ccctgcaaggacaacaaagagtgtgtcctctacaaccatgtttgtgatggagaaaaagac
tgcgcagatggctctgatgaggaagaatgtttatcagcatgtgaaacggatcagttccag
tgtgcgcatggaaagaagtgcatagagcagagccaggtgtgtgacggtgtgcctcagtgt
caggaccgctcagatgagctgggatgtgccaagcggatggagggctgtgctcaccaatgt
gacgacaagagccgttgcattcctaacagcttcctctgtgatggggagagggactgtttg
gatggcagtgatgaggcaaactgtgttgacggggcctgcagtgccacggagttcaagtgc
accagtggccagtgtgtgtcagacacaatgctttgcgatggtcacccagactgctgggat
cgctcagatgaggagagctgcaccaacgcaccggtctgccccaccaaacaccgctgcccc
cagagcaaggagtgtctggtgcaagagtggatctgtgacggagatcaggactgcaaagat
ggcactgatgagaaggattgtcccgtggctccactgaactgtggtgagttccagtggttg
tgtaaatccaaaagcaagtgtatccctacagcctggaggtgtgatggcatgaaggactgt
gacgatggcagtgacgagactgaatgtggaatggtgacatgcctccctcaccagttccag
tgtggtagccaggagtgcctggatcccgtccaagtgtgtaacagcattaccaactgcgca
gacggctcagacgagggcggtagctgccagatcacttgcgcagacgcagataacagccgt
tgctcccagagctgctacagcacaccacagggaacgcgttgtcactgtgcagcagggttc
acgctaatgaaggacaggctgacctgtgttgatattgatgagtgtgaaggccagagctca
ggtgtgtgcagtcagctgtgcatcaacactccaggctcatatcaatgtgactgtcaccca
ggctacataatggaggcagatggacaccactgcaagatcaccggtgaacccttcctgctg
tcatcagtccaaacggacctcttcatgtttggcctgcgcagtggcagccttgatgtgttg
tcttcctctgccaagaaggccatcctctccttggactatgactggagggaccagagggtc
ttttgggtcagtctggacactgagagcatcaggtggtcctcgctggaccagaagaccaca
ggaactcttattaaaggtgtccgagctgattctgttgctgtggactggctcgggaggaac
ctgtactggattgacggagtgaatagtcagattgttgccattagactaaccacagatact
gtcaaatcgctggaccacagcgtcatcctggatgaagacctggatcagcctcgctctctc
gcactgctgccacaaaaaggactgatgttctggacagagattggtaatgtagtgaagata
gaacgtgccgggatggatgggtcagagaggaaggcagtagtaaactcgagtctgggctgg
ccaggcggtgtggctgtagacaccatctctgacagagtctactggacggatgaaaggctg
agggcgattggatctgcaacactggatggagatgacattcagattctacagatgaaagag
accaccaacccgttctccctggcagtgttcaatgacatgctctactggtctgatgctaag
aagcgagtggtgttggctgcccataaaatctctggcaaaaaccaacaagttctcctgaaa
agacccagacaaccttttggtgtgaaaatcattcacccattgctccagatgggcattgag
agtccctgtgaaaagatagactgttcgcacatgtgtgtgttggccccgggacccaaggct
gtgtgcaagtgtccctctggccttttactggctgaggatggcctgacctgctctagctca
gtcaattcagcattcctgctgatgctgtctccctccaccgtcacccagatctacttgcag
tcccgacacacagcagcagagctgaagggctggcctgaacacctggccctgcaggtgccc
agtgtcaatgaagcagccatcattgactacagccttcgtgaccacaccctgttcttgaca
gatgacggcacaacttcactcagctccttcaagctgagggactcggacttgtcctctcag
ggccagctcctaaaactcctgggcaacaccattaccgccatggctctggactgggtaaca
cttaacatctactggagcagcgacaaacagcctcgcctgcaggtcacctccatcacaggt
gcacacactgctgttctcataaaagatggtattggcagagtggaatccattgccctccac
cctcccagtggaagggtttgtttcaccaacgtggggctgcagggtacgggtactgtggct
actgttgagtgtgccaacatggatggtgctgggcggagtgtggtgtggaaggatgctgtc
cagccaacatctctggtcttctccagtactggggatacaatttactgggctgacatggat
ttagggaccatcggcactgtccaacttgatggatctggatacagagagctgaagaccggt
gatggcctggctgctgtggctctgagtgatgacgcactgctgtggatgactgtcagtgac
aagaccaggctctggtacagtgatgaacagcagcaaaacaagttgtggtttgaggtcggc
acagaagtggtcagcttaaaggcattcagcaagtccagtcagactggttcaaaccagtgc
acagaaaacaacggaaactgccagcacttatgtcttgccaccccagagggtcggacatgc
aagtgtgcccacgactacatccctgtgaatgctacccactgtggtccagagcagagctgc
ccaggtggcaccaggccctgtctggatcaactctcatgtcagcctgttgagaagttctgt
gacaagcacattgactgctatgaccactcagatgagaactgtgtcactctgaagcagaga
tcaggagcaaaggtccttgctcccacccaaccccacagctcatctcctcctcgtccgtcc
cctccttctcctctctctgaagacactggcccgaacaccaccctaaatgttagcagtcag
ctcatgaacctggatgcgcagcagtgcagccagaaacgctgcagtggtaatggccgctgt
gtggaggtcaatggagaaactgcatgtgtgtgtgcactgggctacagtggtgattcctgt
caagacaatctcctaaagaccatgcagggtcccattatctacggtgctgtggggctctgt
gcaggagtggtggtcattgctgtgatggcagtggtggttaagaggaagaagagcgccaac
acaaggagagctagcccagcagcagtgaaggagacgtgtatgactgacctggagaacaat
actgagaccagccccagtacacaagctgcctcagcagacacagacaaaccagaggaagca
gtatcttctgttgactga
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