Epinephelus fuscoguttatus (brown-marbled grouper): 125890060
Help
Entry
125890060 CDS
T08419
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125890060 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125890060 (smarca2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125890060 (smarca2)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125890060 (smarca2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125890060 (smarca2)
Chromatin remodeling factors
BAF complex
125890060 (smarca2)
PBAF complex
125890060 (smarca2)
GBAF(ncBAF) complex
125890060 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125890060
NCBI-ProteinID:
XP_049434421
LinkDB
All DBs
Position
LG6:39410523..39479986
Genome browser
AA seq
1583 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKTMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQSGPMMPMDPQTAVPNMSNMSQ
QGRGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQA
PTASPYSRPPGMPMAPLGGPQSSPCPTPTMQGHNQSTGPKPWSDGQVGENQASAQKHITP
VASGRPSPAPPQAAPVPAGPMPGSSVTPQPPGQQVSPMLQMQKQNRVTPIQKPQGLDPVG
ILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMR
RDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKD
FKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTTLVHEHKAAQAAKEKKRRKKKKKKLDGDGEGPSAIGPDGE
PMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEF
EEEEEEEGAKPETEEKKIIDPNEDEVFGAAAKDIIETAKQDVDDEYSVPTGQTSSQSYYG
VAHAVIERVEKQSSLLINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI
TYLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPVLRRGLVPQLRSGKF
NVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTP
LQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLR
PFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKT
LMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGFISGLDLYRASGKFELLDRILPKLQA
TSHRVLLFCQMTSLMTIMEDYFSYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLL
STRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI
LAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEEEDEIPDDETLNQMIA
RNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDEAEVERLTYEEEEEKMF
GRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDDGGS
KTKKKRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYY
ELIRKPVDFKKIKDRVRSHKYRGVGDLERDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK
SARQKIAKDDESDDDSDEDEDDEDESEAEAKSVRVKIKLSKEARSHDKGKKRQSRGKAKP
VVSDDDSDEDLDDNDQSDKSDDE
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacatcaggtggtatgtcccatcctggcccttctccgggggca
ggtctatccccagggcccatcttgggccctagccctggaccagacccctccccaggctct
gttcacagcatgatgggacccagccctggacctggaacacccaacgcacctcatggcatg
cagggacagggacaaagtgactattctcaggacagcatgtatcctatgcacaagacaatg
gagggaatgaatgaaaagaccatggcagatgcaatgcactttggtcacatgaaaggtgtg
gggatgagatctctgcatagtggcatgggacctccacagagtccaatggatcagcacagc
caaggatacatgtcccctcatccttcccccatgggtgtccatgagcatgcctctagtccc
atgtcaggaggtggaggtggtgggggacccacgcctccccacatgcctccctcccagtca
ggccctatgatgcccatggatccccagacagctgtgcccaacatgtccaacatgagccag
caggggcggggaccttctgctttcagtccggtccagctgcagcagctcagagctcagatt
ctcgcctataagatcctgggtcgtgggcaacccttacctgaaaaccttcaactggctgtt
cagggcaagaggagcctacccacaatgcaacagcagcaacagcaacaacagcagcaggca
cctactgctagtccttacagcaggcctccaggtatgccaatggcacctttgggtggtccc
cagtcaagtccctgccctaccccaaccatgcaaggacacaatcaaagcacaggacccaaa
ccgtggtctgatggtcaggttggtgaaaatcaagccagcgctcagaagcacatcactcca
gttgccagcggacgcccgtcccctgcaccacctcaggccgcgcccgtgccagcaggaccc
atgccaggcagttcagtgacccctcagcctcccgggcagcaggtgtcccccatgcttcag
atgcagaaacagaaccgcgtcacaccaatccagaagcctcagggcctagacccagtgggg
atcctgcaagagagagagtacaggttgcaggctcggattgcacaccgaatccaggagctg
gaaagtttgccaggctctctgccccctgatctgaggactaaagccacagtggagctcaag
gcactgcgtttactcaacttccagcggcagctgagacaggatgtggtggcatgtatgagg
cgagacacgaccctggagacggccctcaactcaaaggcttacagacgcagcaagcggcag
acgctgagggaggcccgcatgaccgagaagctggagaagcagcagaagctcgagcaggag
aagaagcgcagacagaaacatcaggagtatctcaacagtatccttcagcatgctaaagac
ttcaaagagtatcaccgctcagtgtctggcaaaatgcagaagctcaccagagccatcgcc
acctggcacaccaacacagagcgggaacagaagaaggagactgagagaatcgagaaggag
aggatgaggagactgatggcagaagatgaggaaggctaccgaaaactcatcgaccaaaag
aaagacaagcgtctggcctacttgctgcagcagacggatgaatatgtggccaacctcacc
accctggtgcatgaacacaaagctgcccaagctgccaaggagaagaaaaggaggaagaag
aaaaagaagaagttggacggagatggtgaaggccccagtgccattggacctgatggagag
cccatggatgagagcagccaaatgagtgagctgccagtcaaagtgattcagacagagact
gggaaagttttgcagggaacggatgctcccaaatccagccaactggaggcctggctcgag
atgaaccctgggtatgaggtcgccccacggtcagacagtgaggagagcggctcagagttt
gaggaggaggaggaagaggagggggccaagccagaaacagaggagaagaagataatcgat
cccaatgaagatgaagtgtttggggcggctgcgaaggatattatcgagacagccaagcaa
gatgtggatgatgagtacagtgttcccactggacaaaccagctcccagtcttactatggt
gtggcccatgctgtcattgagagggtggagaagcagtcgtcgctgctgatcaacggcaca
ctcaaacattaccagatccaggggctggagtggatggtgtccctgtacaacaacaatcta
aatggcatcctggctgatgaaatgggcctcggcaaaaccatccaaaccattgccctaatc
acctacctgatggagcacaagaggatcaacggtccctttctgatcattgttcctctctcg
actttgtctaactgggtctatgagcttgacaagtgggctccctctgtggtcaaaattgct
tacaagggcacccctgtgttgcgccgcgggcttgtgcctcaactccgcagcgggaagttc
aacgtcttgctgaccacctatgaatacatcatcaaggacaagcacatactggccaagatt
cgttggaagtacatgattgtggatgagggtcaccgcatgaagaaccaccactgtaagctg
acccaggtgttgaacacacactatgtggctccccgacgcctccttctcaccgggacacca
ctgcagaacaagcttcccgagctgtgggcgctgctcaacttcctcctgcccaccatcttt
aagagctgcaccaccttcgagcagtggttcaacgcccccttcgccatgacaggagagagg
gtggacctaaatgaggaggagaccatcctgattatccgacgtttgcataaggtgctccgc
cccttcctgctacgcagactgaagaaagaggtggagtctcagctgccagagaaggtggag
tacgtcgtaaagtgtgacatgtctgccatacagaaggttctgtatcgccacatgcagaaa
ggcatcctcctcactgacggctcagagaaagacaagaagggcaaaggaggagcaaagacc
ctaatgaacaccatcatgcagctgaagaagatctgcaaccacccatacatgttccagcac
attgaggaatcctttgctgagcacttgggctttccaaacggcttcatcagcgggcttgat
ctgtatcgagcttctgggaagtttgagctcctggatcgcatcctgccgaagctgcaggcc
accagccaccgagtcctgctgttctgccaaatgaccagtctgatgacaatcatggaggac
tacttcagctaccgcaacttccagtatttacgtctggatgggaccaccaaatctgaggac
cgagcagcactgctgaagaaatttaatgaagaaggatcgcagtacttcatcttcctgctc
agtaccagagccggcggcctcggcctcaacctgcaggctgctgacactgtcgtcatcttt
gacagtgactggaacccacaccaggaccttcaggctcaggaccgggctcaccgcatcggt
cagcagaacgaggtgcgcgtgcttcgcctctgcaccgtcaacagcgtggaggagaagatc
ttggcagccgccaaatacaaactcaacgtggatcagaaagtcatccaggcgggcatgttt
gaccagaaatcctcgagccacgagcgccgtgccttcctccaggccattctagagaccgag
gagcagaatgaggaggaagatgagatacccgatgatgaaactcttaaccagatgatagcc
cgcaatgaagatgaatttgagctctttatgcgcatggacatggaccgacgccgcgaggac
gccaggaacccaaagcgtaagcctcgtctcatggaggaggacgagttgccttcctggatc
atcaaagacgaagccgaggtcgaacggctcacgtatgaagaggaggaggagaagatgttc
ggacggggatcgcgctgtcgtcgggacgtggactacagcgacacgctgactgaaaaacag
tggctgcgggctatcgaggatggaaacctggaagagatggaggaggagatccggcttaag
aagcgcaaacgcaagagacgtcaggacaaggactcatcgagcagagacgacggaggctcc
aagaccaagaagaaacgtgggcgtccaccagctgagaaactctcccccaaccccccgaaa
ctcaccaagcaaatgaacgccatcatcgatacggtcatcaactacagagacgggtcggga
agacaactaagcgaggtgttcgtccagttaccatccaggaaggagctcccggaatattac
gagctgatcaggaaacctgtggacttcaaaaagatcaaggatcgtgtgaggagccataaa
tacagaggggtgggagacctggagagggatgtgatgctgctttgtcacaacgcccagacc
ttcaacctggagggatcccagatatatgaggactccattgtccttcagtctgtgttcaag
agtgccaggcagaagattgccaaggatgacgagagtgatgatgacagcgatgaggatgag
gatgacgaggatgagtcagaggctgaggccaagtctgtgcgggttaagatcaagctgagt
aaggaggcgcgcagccatgacaaaggcaagaagaggcaaagccgagggaaggccaagccg
gtggtcagcgacgacgacagcgatgaagacctggatgacaatgatcagtcggacaagagc
gacgatgagtga
DBGET
integrated database retrieval system
