Epinephelus fuscoguttatus (brown-marbled grouper): 125890134
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Entry
125890134 CDS
T08419
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03030
DNA replication
efo03410
Base excision repair
efo03420
Nucleotide excision repair
efo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125890134 (rfc5)
03410 Base excision repair
125890134 (rfc5)
03420 Nucleotide excision repair
125890134 (rfc5)
03430 Mismatch repair
125890134 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efo03032
]
125890134 (rfc5)
03036 Chromosome and associated proteins [BR:
efo03036
]
125890134 (rfc5)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125890134 (rfc5)
DNA replication proteins [BR:
efo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125890134 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
125890134 (rfc5)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125890134 (rfc5)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125890134 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
125890134 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
RuvB_N
AAA_14
ResIII
AAA_16
DEAD
AAA_assoc_2
DUF815
PhoH
AAA_7
ATPase_2
TIP49
AAA_30
AAA_5
AAA_19
DNAX_ATPase_lid
nSTAND3
AAA_2
Mg_chelatase
Thioredoxin_6
AAA_25
DUF4119
Motif
Other DBs
NCBI-GeneID:
125890134
NCBI-ProteinID:
XP_049434576
LinkDB
All DBs
Position
LG6:37368063..37373394
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSKAPPQTRNLPWVEKYRPQTLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPVLSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEENVYICTGHPLRSD
IANILEWSLNKDFTAAYKQILELKTLKGLALHDILTEVHLLIHRVDFPPAIRIGLLIKLA
DIEHRLASGTSEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacaagtaaagctccgccacagaccaggaacttaccgtgggttgaaaaatac
agaccacagacacttgatgatctgatctcacacaaggatattctaagcaccatccagaag
ttcatcagtgaggacaagcttccccatctcttgttctatggcccccctggaacaggcaaa
acttccaccatcctcgcctgtgccaggcagctgtacaaggacaaagagttcaactccatg
gtgttggagctaaacgcatcagatgacagaggcattgatgttgtacgaggtcccgttctg
agttttgccagcaccaggaccatcttcaagaagggcttcaagttagtgatactggacgag
gctgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagtttaca
gaaaacactcgattctgtctgatctgtaactacctgtccaagatcatcccggccctgcag
tctcgctgcaccaggtttcgcttcggcccgctgtccccggaccagatgatccctcggctg
gagcacgtagtccagcaggagagtattgacataaatccaggtgggatgaaggccattgtt
acgctatcatcaggcgacatgagaagatcactcaacatactgcagagcaccagtatggcg
tacgggaaggtcacagaggaaaatgtgtacatctgcacgggtcaccccctccgctcagat
atagccaacatcctcgaatggtcgctcaacaaagacttcactgcagcgtacaagcaaatc
ctggagctcaagactttgaaaggtttggccttgcatgatatcctcactgaggttcatctg
ctcatacacagagtggactttcctcctgccatccgcattggtctgctcatcaagttggct
gacattgaacacaggctcgcttcaggaaccagtgagaagatccagctcagctccatggtc
gcagcattccaggcggtcagagacctcgtggtcagcgaggcctcgtag
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integrated database retrieval system
