Epinephelus fuscoguttatus (brown-marbled grouper): 125890227
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Entry
125890227 CDS
T08419
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125890227 (tncb)
04518 Integrin signaling
125890227 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125890227 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125890227 (tncb)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125890227 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
DUF7949
Fn3_PBP1
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
EGF_PEAR1L
Fn3_Dep-1_1st
fn3_2
FN3_Tor_3rd
REJ
Motif
Other DBs
NCBI-GeneID:
125890227
NCBI-ProteinID:
XP_049434710
LinkDB
All DBs
Position
LG6:complement(339287..549994)
Genome browser
AA seq
1514 aa
AA seq
DB search
MGAKGFLLGCVTVALLLELSTAGVVKKVIRHRREALIPKKTQENLTLPHPDQPVVFNHVY
NINVPSTSLCSVDLDSPGNTDPKHRSAPMDMQNTEHMEHTVDGDNQIIFTHRINIPKQAC
GCNNQLPDIKDILNRLEMLESELSSLREQCSSGSGCCGAQVTGEVSTKPYCNGRGNWSTD
TCSCVCETGWKGPNCTEPECPNDCQDQGRCVDGKCECFEGFGGDDCGTELCLLDCGDYGH
CVDGSCLCDEGFIGEDCTQTNCLNNCLGRGHCIDDECVCNEPWTGFDCSELICPNDCYDR
GRCINGTCFCEEGYTGEDCGELTCPGNCNNRGMCVSGQCVCQTGYSGEDCSKLTCPKNCN
ERGHCFNGKCICDPGFEGEDCYILSCPDNCSNRGQCLNGECICEVGYHGDDCSELSCPNS
CQDRGHCINGQCMCGKGYTGEDCSIKTCPKDCMGRGECVDGKCACFIGFTGKDCGELTCP
NDCLDHGHCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGNCVCYEGFTGPDCSMLT
CPEDCQNQGHCENGVCVCDEGFIGEDCSEVSPPKNLRVVDVTPETVDLSWENEMRVTEYL
ITYVPTAPGGLELDIRVPGDQKMTTIQELEPGLEYLISVYAVLSNKRSLPVSARVATHLP
EPEGLKFKSVRETSVEVQWDPLDIPFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLG
PGQEYEVKLELVKNNKRGPPASQNVVTMIDAPSQVDVRDVTDTTALVTWFQPVAEVDGVS
VSYGPSSNPADRNMVELSSTDTQYHLVGLTPDAQYEVSLLARRGERTSIPVYESFLTDLD
APSDLQMVELTDESITVEWRNSQAPVDNYRIKYGPLSGGEHRELLFPPGPKDNTQAKITG
LRPGTEYGMGVTAVKNERESLPTTTNAVTEEEKPVVTNVTVSDISWDSFLLSWSAEDGTF
EAFLIEVTDAETGAEWQNHTVPADARSLTISGLSSATWYRANLFGVYRGLLLDPVFADTI
TDLGSPKGIRFSDVMDTSATVHWVVPRARVDNYRVTYMPAHGGNAKTLTVNGSESHTVLP
NLTPGVTYQVTIVALKGQSESEPGSDSITTALDKPRGLTAVNITDSEALLLWQPAIATVD
GYVITYSADSVAPVMERVSGNVVEFEMSSLTPATHYTVKVYAVRNMAKSAATTTELTTDV
DAPQDLTASNIQTENGMLTWKPPRADITGYILSFESADGTVHEVVLSPTAVSYNMAQLSA
STEYSVKLQAIAGPKRSRVITAVFTTTGVLYRHPRDCSQLLLNGDTSSDLYTIFLGGDES
QPLQVYCDMSTDGGGWIVFLRRQSGRLEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAG
GQYELRVDLRDKGETAYAQYDKFSVSEPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDH
DNDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKLR
PSNFRNLEGRRKRS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaaaggcttcctcttaggctgtgtgactgtggccctgcttctcgagctctcc
actgccggtgtggtcaagaaggttattcgccaccgtagagaggctctgatacctaagaaa
acccaggagaaccttaccctgccccaccctgaccagccagtggtgttcaaccacgtctac
aacatcaatgtcccctccacctccctctgctctgtggacctcgactcacctggaaacact
gatcccaaacacaggagtgcccccatggacatgcagaacacagagcacatggagcacaca
gtggatggcgataatcagatcattttcactcatcgtatcaatatcccaaagcaggcatgt
ggctgcaataaccagctgccagatatcaaggatatcctgaacaggctggagatgctggag
tcagagctgtctagtttgagagaacaatgcagcagtgggtcaggctgctgtggagctcag
gttacaggtgaagtgtccacaaagccctactgtaatggccgtgggaactggagcactgac
acatgcagctgtgtatgtgagaccggatggaagggccccaactgcaccgaacctgagtgc
cccaacgactgccaggaccagggccgctgtgtggatggcaaatgtgagtgctttgagggc
tttggtggggatgactgcggaactgagctttgtctgctggactgtggtgactatggtcac
tgtgtcgacgggtcctgcctctgtgatgagggcttcattggtgaggattgcacccagacc
aactgcctcaacaactgcctgggccgggggcactgcatagatgatgagtgtgtttgcaac
gagccatggacgggcttcgactgctctgaactcatctgtccaaatgactgctatgaccgc
ggacgctgcatcaacggcacctgcttttgtgaagagggctatactggagaagactgtggt
gagctcacttgtcctggaaactgtaacaaccgtggcatgtgtgttagtggccaatgtgtg
tgccagactggctacagtggagaggactgctcaaagctcacctgtcccaagaactgcaat
gagagaggccattgcttcaatgggaagtgcatctgtgatccaggatttgagggtgaagat
tgctatatcctctcatgccctgacaattgcagtaacaggggtcagtgccttaatggagaa
tgtatatgtgaagtgggataccatggagatgactgtagcgagctctcctgccctaacagt
tgccaagaccgtggccactgcataaacggacaatgcatgtgtggcaaaggctatactggg
gaggactgcagcattaagacctgtccaaaagattgcatgggacgtggagagtgtgtagat
ggcaagtgtgcatgtttcattggcttcacaggaaaagactgtggcgagctgacctgccct
aacgactgcctggatcatggccactgtgtgaatggacaatgtgtttgtcataagggtttc
actggtgaggactgcagtgagaagacatgtcccaaaaactgtcttgataggggttactgt
gtcgatggcaactgcgtgtgttacgaaggtttcactgggccagactgctccatgctgacc
tgtccagaagactgtcaaaaccagggacactgtgagaacggtgtgtgtgtctgtgatgag
ggcttcattggggaggactgctctgaagtctcaccacctaagaacctaagagtggtggat
gtcaccccagagactgtcgacctgtcctgggagaatgagatgcgtgtgactgagtacttg
atcacctatgtgccaactgcccctggaggtcttgagctggacatacgggtgcctggggac
cagaagatgaccactattcaggagcttgagcccggcttggagtacctgatcagcgtctat
gctgtgctcagcaacaagaggagtcttcctgtcagtgctagggtagctacacatctgcct
gagcctgagggactgaagttcaagtcagtgcgggaaacatcagtggaggtgcagtgggat
ccattggacattccctttgatggctggaacctcatcttcagaaacacaaaagaggaagat
ggcgagattcttaattccctcggccgtccagaaaccacctttgaacagtcgggcctggga
cctggccaggaatatgaggtcaagctggagctggtgaagaacaacaaacgtggaccgcct
gcctctcagaatgtcgtcacaatgatcgatgcccccagccaggtagatgttcgtgacgtg
acggacaccacagccctcgtgacctggttccagcctgtggctgaggtggacggagtcagc
gtatcctatgggcccagctcaaaccctgctgatcgcaacatggtagagttgtcctccact
gacacccagtaccacctggtaggcctcacccctgatgcccagtacgaggtgtctctattg
gctaggaggggagaacggaccagcattcctgtctatgagtctttcctcacagacctggat
gcccccagtgacctgcagatggtggagctgacagacgagagcatcactgttgagtggagg
aacagccaagctccggttgacaactaccgcatcaagtatggacctctgtctggaggggag
cacagagagctgctcttcccaccaggacccaaggacaacacgcaggccaagattacaggc
ctgagacctggcacagagtatggaatgggtgtgactgcggtgaaaaatgagcgggaaagt
ctgccgacgaccaccaacgcagtaactgaggaggagaagcctgtggtgaccaacgtcact
gtcagcgacatatcgtgggacagcttcctcctgtcctggtcagctgaggatgggacgttc
gaggcctttctgattgaggttactgatgcagagacgggcgctgagtggcaaaaccacacg
gtgcctgccgatgctcgcagcctcaccatctctggtctctcctctgccacctggtacagg
gccaatctgttcggggtgtacagggggctcctcttagaccctgtctttgcagacaccatc
acagaccttggctcacctaagggcatccgcttctctgatgtcatggacacatccgccacc
gttcactgggtagttccaagagctcgagtggacaactacagggtcacatacatgcctgct
catggaggtaatgctaagacactgacggtaaatggctctgagtctcacactgtgctgccc
aacctgaccccaggggtcacttatcaggtcaccatcgttgctctcaagggtcaaagtgag
agtgagcctggatcagacagcattaccacagctctggataagccccgtggtctgactgca
gtcaacatcacagacagtgaagctctgctgctctggcagcccgccattgcgactgtagac
ggctacgtcatcacctacagtgcagactctgtggctccggtgatggagcgtgtatcagga
aatgtggttgagtttgagatgagttctctgacaccagcaacacactacactgtgaaggtc
tatgctgtgaggaacatggccaaaagtgcagccactacaaccgagttgactactgatgtg
gatgcccctcaggacttgacagccagtaacatccagacagagaatggtatgctgacctgg
aagccacctcgcgctgacatcaccggatacatcctcagctttgagtctgcagatggcacc
gtgcatgaggtggtcttgagtcccactgctgtctcctataacatggctcagctcagcgcc
tccacagagtattcagtcaagctgcaggccatcgctggtccaaagagaagcagagtcatc
actgctgtctttaccaccactggtgtgctgtacagacaccccagagactgctcccagttg
ctgctgaatggcgacacctcatctgatctttacaccatctttctgggtggagatgagagc
cagcccctgcaggtctactgcgacatgagcactgatgggggtggatggattgtgttcctc
agacgacagagtggtagactagaatttttccggaactggaagaattacacagctggcttt
ggtgacatgaatgatgaattctggctgggtctttccaacctgcataagatcacagctgga
ggtcagtatgagctgcgagtcgacctgagagataagggtgaaacagcctacgctcaatat
gacaagttctctgtctctgaacctcggacccgctacaaagtccacgtaggaggatatagt
ggaactgcaggagactctatgacctaccaccacggtcgtccattctccacttacgaccat
gacaatgacattgctgtcaccaactgtgccctgtcctataaaggagccttctggtataaa
aactgccaccgtgtcaacctcatgggacgatatggagataacagtcacagtaagggtgtg
aactggttccactggaaaggccatgagcactccatcgagtttgctgagatgaagctcagg
ccatccaacttcagaaacctggagggaagaaggaaaaggtcataa
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integrated database retrieval system
