Epinephelus fuscoguttatus (brown-marbled grouper): 125890256
Help
Entry
125890256 CDS
T08419
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125890256 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125890256 (si:dkey-3h3.3)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125890256 (si:dkey-3h3.3)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125890256 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_4
zf-rbx1
KH_DTX3L
zf-RING_10
Zn_ribbon_6
zf-C3HC4_4
DUF1272
DZR_2
DUF3536
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125890256
NCBI-ProteinID:
XP_049434769
LinkDB
All DBs
Position
LG6:complement(5698219..5720810)
Genome browser
AA seq
431 aa
AA seq
DB search
MEFITDITVIIDAAHYKDNGRLMKILQSYSPEKKASCYIVRGTSYEEVENLSVKLSAGRY
HSSPVTRRRTSLRDASPHVKPVDVSSFVMAYIEQNCSRELKKIQGNSFVIETQPNLRAGH
NKPNSTVRVTFRPQPVSFDRVHGDFVRQRFITFYQRTASDLQVTSVPVSPHEHKDLQQIF
PHLLFKPSHNRSEVTVTGPFVHVAKLKEFLSQNTLSSRKSSVKKSPADTPSSRTSGPSPA
HSKDPEGESCPICMEQIVTTEKETLRCKHSFCRSCLKTAFDYKPVCPTCGELYGILTGTQ
PDGGRMDVTESSSSLPGYEKYGTITIRYYVPSGIQKEEHPNPGQPYEGVSRTAYLPDSPE
GRRILKLLKRAFDQRLIFTVGRSTTSGRNNVVTWNDIHHKTSTHGGPTHYGYPDPDYLSR
VRDELKAKGIE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagtttatcactgacatcaccgtcatcattgatgcagcacattacaaagacaatgga
agattaatgaagattcttcaatcttacagtcctgagaaaaaagcttcctgctacatagtg
agaggaacctcctatgaggaggtggagaacctttcagtcaaactgtcagctgggaggtat
cactccagtcctgtcacacgtagacgaaccagtctgcgagatgcttcaccccatgtcaaa
cctgtggatgtatccagctttgttatggcctacattgagcaaaattgttccagagaacta
aagaaaattcaagggaacagttttgtcattgaaacacagcctaacctcagagcaggacac
aataaacccaacagcacagtacgggtaactttcagaccacaacctgtctcctttgaccgg
gttcacggggactttgtcagacagcgattcatcacattctaccagagaactgcctctgac
ctgcaggtcacatctgtccctgtgagtccacatgagcacaaagacctgcagcagattttt
ccacacctcctctttaaacccagtcacaacagatctgaagtcacagtgactggacctttt
gtgcatgttgctaaattgaaagagttcctttcacaaaatacactgagctcaagaaagagt
tcagtgaaaaaaagtccagcggacactccaagcagcagaacctcaggtccttcacctgca
cacagcaaagatcctgaaggagaatcatgtccaatctgtatggaacagatagtcaccaca
gagaaagagactctgcggtgcaagcactcattctgcagaagctgtctgaaaacagccttt
gactacaagcctgtgtgcccgacatgtggagagttatatggcattttgacaggaacacaa
cctgatggaggcagaatggatgtcaccgaaagctcttcatctctgcctggatatgagaag
tatggaacaataacaattcgctattacgttccaagtggcatccaaaaggaggagcatccc
aaccctggtcagccgtatgaaggtgtgtcccgtacagcctaccttccagactcccctgag
ggcagaaggatcctgaaactgctgaagcgagccttcgatcagagactcatcttcactgtt
ggtcgctccaccaccagtggcaggaacaatgtggtcacatggaatgatattcaccacaaa
acctcaacacatggaggacctactcactatggatacccagatcctgattatctcagccgg
gttcgagatgaactgaaagccaaaggaatcgaatga
DBGET
integrated database retrieval system
