Epinephelus fuscoguttatus (brown-marbled grouper): 125890538
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Entry
125890538 CDS
T08419
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125890538 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125890538 (thoc5)
03041 Spliceosome [BR:
efo03041
]
125890538 (thoc5)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125890538 (thoc5)
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125890538 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
125890538
NCBI-ProteinID:
XP_049435176
LinkDB
All DBs
Position
LG6:complement(21879646..21889446)
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSEGGTPETKRGRGEGDQQDARVYSEEIELDGRDPEQDFLQYKESC
ESLATLMSEIQELKASGAKEGCAEIEQRRMQCCIHFMNLKKLNRLAHMRLKKGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQGAPQDISRPQLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SLPVQEYLSMPFEQTQIQTEVARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDEKRREMLKRHPLSLLLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTSTDLNTAISAGDLLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIFSFADYVDELGHPYMWVQSLGGLHFPKDSSESVRVGSSLSASHMESTMKLL
RGRLQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTISHQEYLDLPYTRHV
TDAGLAKETDLYFMAVVERGTARLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQLSRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgacgccttaaagaagcgaaagtcgaaggttctccgtagtgaaggaggaacc
ccagagacgaagcgaggtcgcggggagggggaccagcaggatgcgcgtgtgtatagtgag
gagatagagctggatggcagggaccctgagcaggacttcctgcagtacaaagagtcatgt
gagagtttggccacactcatgagtgagatccaggagcttaaagccagtggagccaaggag
gggtgtgctgagatcgagcagagacgtatgcaatgctgcattcacttcatgaatctgaaa
aaactcaatcgtctggctcatatgcgactgaagaaaggcagagaccagacacatgaggca
aagcagagagtggatgtgctgcaccttcagttacagaacctgctgtatgaagttatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcacgaggagatagacttg
gtgtccgaagaagagttttaccagggggcaccacaggatatttccagacctcaactcaca
aaaaatgatcctcaccaactcacgctggcacggctagactgggaacttgaacagaggaag
aggttggcagagaaatacaaggagtcacaggcaacaaaggagaagatccagaagagcatt
gaggtgaagaaagagcatctgacaagcttgcagccaggactcaatgccatcatgcaggcc
tctctcccggtccaggagtacctgtccatgccttttgaacagactcagatacagacagag
gttgctcgccacctgccgccacctctctacgtcctatttgttcaagccaatgcctatggc
caggcctgtgacaagaacctgagtgtctcaatcagtggtgatgtggatgaagccaaggcc
ctgtccaaacctccagaagattcccaggatgatgagagtgactcagatgcagaggaggag
caagagaaaacgaagaggagaaggccaactacaggcggccagctggatgagaaaagacgg
gagatgctgaaaaggcaccctctgtcactcctcttagacctcaagtgtaaagatggcagc
atccttcatctctacttctattacctgatgaatctcaacatcatgacagtcaagaccaag
gtctccacctccacagaccttaacacagccatcagcgcaggggacctgctgaagtcagac
actctcctcagctgtctctacaccagcgaccagggacgcgaaacccccaatccagctaat
cgctaccagtttgataaagtcgggattttttcctttgctgattatgtggacgagctgggc
catccctacatgtgggtgcagagtctaggaggactacattttcccaaagattcttcagag
agtgtacgtgtgggcagttctctgagtgccagccacatggagagcaccatgaagctgctg
aggggacgactccagtcccgcctggctttacacaaacagtttgcctctttagagcacagc
atcatccctgtctccagtgagtgtcagcacctcttccctgccaagatcatctcccgttta
gctcgctggaccactatcagtcaccaggagtacctggatctgccatatactcgtcatgtg
actgatgctgggctggcaaaggagactgatctgtacttcatggctgtggtggaaaggggc
acagctcgtctccaagccgctgtggtgctgagtccccgttacccagaaatctctcctctc
ttctccctgtccctcagctggaagggagagcgcagtggacgcactgatgacaaccttcga
gccatggagagcgaggttaatgtgttcaaaaatgagctacaggggccacgtccaggacac
cagctcttgaccaatcagctttcccgcctgtgtgtctgcctggatgtatatttggagact
gaaggacaagatgacagcgtggagggaccacgagagtttcccagagaaaagatgtgcctg
cgcactgtcaggggtccaaatcgtctgaagccattcaagtacaaccacccacagggcttc
ttcagtcaccgctag
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integrated database retrieval system
