Epinephelus fuscoguttatus (brown-marbled grouper): 125890706
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Entry
125890706 CDS
T08419
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125890706 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efo03041
]
125890706 (usp39)
Spliceosome [BR:
efo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
125890706 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125890706
NCBI-ProteinID:
XP_049435424
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Position
LG6:complement(23518770..23525719)
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AA seq
500 aa
AA seq
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MKVSLKREREAEVDDDDDDRVAAKIGRGRVIEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKTSIITKAFQGSMRIFSKKLPHPDLTP
EEKEAMLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQLTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQESDDDTNNHTGV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttctctgaagcgagaaagagaggctgaagtggacgacgatgacgatgacaga
gtggcagccaaaataggccgaggacgtgttatagaagaccggagaagccgccactgccct
tacctggacaccataaacaggagtgtgctggactttgactttgagaaactctgctccatc
tctctctcccacatcaatgtgtatgcctgccttatatgtgggaaatactttcaagggaga
ggcttgaagtcccatgcttacactcacagtgtgcagtttacacaccatgtgttcctgaat
ctgcacacactcaagttttactgtctgccagacaactatgagatcatcgactcttcacta
gaagatatcacgtatgtgctgaaaccaactttcaccaagcagcacattgcagggctggac
aagcagggtaaactgtacagagcctacgatggtacaacctacctgcctggcattgtagga
ctcaacaacatcaaagccaatgactacgccaatgtggtgttacaggccttctccaacgtt
ccaccactgcgaaactacttcctggaggaggaaaactacaggggtatccgcaggccaccg
ggggacatcatgttcctcttggtgcagaggtttggtgagctgatgcgcaaactttggaat
ccaagaaacttcaaggcccatgtgtctccacatgagatgctgcaggctgtggttctgtgc
agcaagaagaacttccaaatcaccaaacaaggagatgctgtggacttcatgacatggttc
ttgaatgctctgcatggcgctcttggaggcacaaagaaaaaaacatcaatcatcacaaaa
gcatttcagggctccatgcggatcttctccaagaaacttccacacccagatttaacacca
gaggagaaagaggcaatgcttgtgacagaggagtaccaggagcagatgtccgagtccacc
ttcctgtttctgacccttgacctcccaacagctccactgtacaaggatgagaaggagcag
cttattatcccacaggtccctctcttcaacatcttgggcaagtttaacggcagcacagag
aaggagtacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactgcct
ccgtacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaac
cccacgattgtcaatttccccatcacgaatgttgaccttcgtgagtacttaacagaagaa
gctcaactaacagagaaaaacacaacgtatgacctcgttgccaacgttgtccatgatggg
aaacccactgagggagcgtacagaattcatgttctgcatcatggaactgggaagtggtat
gagatgcaggacctgcaggtgaccgacattctcccccagatgattacactgtcagaggcc
tacatccagatctggaagagacaagagagtgacgatgacacaaacaaccacacgggggtg
taa
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