Epinephelus fuscoguttatus (brown-marbled grouper): 125890708
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Entry
125890708 CDS
T08419
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03030
DNA replication
efo03410
Base excision repair
efo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125890708 (pole)
03410 Base excision repair
125890708 (pole)
03420 Nucleotide excision repair
125890708 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efo03032
]
125890708 (pole)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125890708 (pole)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125890708 (pole)
DNA replication proteins [BR:
efo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
125890708 (pole)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
125890708 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
125890708
NCBI-ProteinID:
XP_049435427
LinkDB
All DBs
Position
LG6:complement(22211997..22233778)
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDQENQDDGSTMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SRKFQGKVAKLEVIPKEDLDLPNHLVGLKRSYVKLSFNTVDDLIKVKREISPAVRKNRER
EQSNDTYTSMLSSALSGGNVTSADEEGMAKSISDQMDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRFRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAQSDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLEQVTNFNEV
CEEIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GASCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLTREEQAKHE
KKRLADYCKRAYKKTHITRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEMKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPASVTYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTSLEEVYASVAKVADYWLDVLYS
KAANMPDTELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAADIEDFGMPARPLQPAIPITTKRKRASQGEDSQVESQDVALTQSWREILGPPPP
TGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGHDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDMAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLTNLYTTERTALLEKTTEELLPPEKHNFEVRAEN
DAKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAVASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRL
GSTVVYGNFNRIMLCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSVMYGEDGAKQKKKSGEEGDEEGSEDEDEDRADVEEDDGDGETDEVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPIKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSNELTQNFFTITQKIQKKVTGTRSVNQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSADAQFCDPCNSYILP
EVICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSY
TLQDLVCTKCKGVKEANMPLYCSCAGDFDLTFPAKSFSEQITVFRNIASHYNMSFLEETI
DWLLVMSPHISQSAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagtggacggtacagagcggaccggggacaaagtggaggagaccag
gaaaaccaggacgatggatccaccatgtccgccctcaagcggctggagcgcagccagttc
accgacgagatggacgctcgtttcggcttcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctactgagatcctggatgatgacaagaggatgatcagt
gctgtggactactatttcatacaggaggatggaagcaggttcaaggtggctctcccattc
aagccatatttttacatcgccactaaaaagaactgtgagagagaagtcatctcatacttg
tcgaggaagtttcaaggaaaagttgcaaagcttgaagtaatccccaaagaggacctggac
ctgccgaaccatctagtcggactgaagcgaagctacgtcaagctgtcattcaacactgtg
gacgaccttatcaaggtcaagcgtgagatctccccggcagtgcgcaagaacagagagagg
gagcagtccaatgacacctacacctcaatgctatcaagtgccttatcaggtggtaacgtg
acgtcagcagatgaagaggggatggcaaagagtatctcagaccagatggacaacatagtg
gacatgagagagtacgatgtgccctatcatgtgcggttgtccatcgacctcaagatccat
gtggctcactggtataatgttcgattcagaggcagcgcttacccaccagagattgtacgg
agggacgatcttgtggagcgaccagaccctgttgttttggctttcgacatagagaccacc
aaactgccgctgaagttcccagacgcacagagcgatcagataatgatgatctcctacatg
attgatggacagggctttttaatcacaaaccgagagatcgtctctgagaacattgaagat
tttgagttcactcccaaacccgagtatgaggggcctttcactgtttttaatgaggatgat
gaggcagctctcattcagaggtggtttgatcacgttcaagaaaccaagccaaatatcttt
gtaacctacaacggagacttctttgactggccttttgttgagactcgggccgccttgcat
ggactgagcatgcacagagagatcggtttccagaaggatagccagggagagtataagtca
agtcaagccatccacatggactgcttaaggtgggtaaagagagacagctacctgccggta
ggaagtcataatttgaaggctgccgcaaaggctaaactgggctatgacccagtggagctg
gacccagaagagatgtgccgcatggcaactgaggagccacagactttagccacctactct
gtgtcagatgccgtggccacgtattacctgtacatgaaatatgttcacccctttatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggact
ctgtgtgaagctctgctcatggtgcaggccttccacgcaaacatcatctttcccaacaag
caggagcaggtcttcaacaaactcacagacgacggccatgtcatggactcagagacctac
gtgggcggccacgtggaggcgctggagtctggagtgtttcgaagtgacatcccctgtcgt
ttcaagatgaacccagctgcatttgacttcctgttgcaaagagttgagaagacgatgcga
catgccattgaggaagaggagaagattcctttagagcaagtcacaaatttcaatgaggtg
tgtgaggagatcaaaaagaagctgatttctctaaaggaggtcccgaacaggattgaatgc
ccccttatctaccacctggacgttggggcaatgtaccccaacatcatcctcaccaaccgc
ctgcagccatccgccatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgcctcctgccagaggaggatgacctggcaatggagaggggagatcatgcctgccagc
cgcagtgagttccatcgcatccagcagcaacttgagtctgagaagttcccgccgtttttc
cccaacggtccacctcgggcctttcatactctcaccagggaggagcaggccaaacatgag
aagaaacgtctggcagactactgtaagagggcctataagaagacacacatcaccaggctg
gaggagcgagtcaccaccatctgccagagagaaaactccttctatgtcgacactgtgaga
gctttcagagatcggcggtacgagttcaaaggactccacaaggtgtggaagaagaaacta
tcggcagctcaggacagcggagacgctgccgagatgaagcgctgcaaaaacatggagatc
ctgtacgattctctccagttggctcacaagtgtattctcaactctttctacggctacgtc
atgaggaaaggggcacgctggtactccatggagatggctggcattgtgtgctacacagga
gccaacataatcactcaagccagagagctcatcgaacaaatagggaggccccttgagttg
gacactgatggtatctggtgtgtcctccccaacaccttccctgagaactttgtggtgaaa
accagcaatgagaagaagcccaaggtgaccatctcttacccaggggccatgctgaacatc
atggtgaaggagggcttcaccaacgatcagtaccacgagctggttgacccagcgtccgtc
acctataatatcaggtcggagaacagcatcttctttgaggtggacggaccgtacctggcc
atgatcctgcccgcctccaaggaggaagggaagaaactgaagaaaaggtacgctgtgttc
aatgaggatggctctctggctgagctgaagggttttgaagtgaagagaagaggagagctc
cagctcattaagatttttcagtcgtcagtgtttgaggcttttctcaaaggtacctctctg
gaggaggtgtatgcctctgtggccaaagtggctgactactggctggatgttctgtacagc
aaggctgccaacatgccagatacggagctgttcgaactgatttcggaaaatcgttcgatg
tccagaaaactggaggactacggagagcagaagtcaacttctatcagcacagctaagaga
ctggctgagttcctgggagaccaaatggtgaaagatgctggtctgagctgtcgctacgtc
atctccagaaaacctgagggttcacctgtcacagagagagccattcctctggctatcttc
caggctgagcccagcgtaaagaaacacttcctccgtaagtggttgaagatgcccagcctg
catgacttggacatccgctctatccttgactggagttattacatagagaggttgggcagt
gccatccagaaaatcatcaccatccctgcagctcttcagcaggttaagaatccagtgccc
agagtgaggcaccctgactggcttcacaagaaactcctggagaaaaatgatatctacaag
caaaagaaaatcagtgagctgttcaccagcgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagctgcagacatagaggactttggaatgccagccagacctctgcag
ccagcaattcccatcactaccaaacggaagcgggcctctcagggagaggacagccaggtg
gagtctcaggatgttgcgctcactcagtcctggagagagatcctggggccgcccccacct
acgggaaaaacacgggaggagcgtctagtgtggctgcgttaccacaagaagaagtgggag
ctgcagctgaggcagaggaaggagaggaagaagaggaggaggctgctggatggtgaagct
caacctgtagggggaggagtgatcagagatggccccaccaccggcctgggaagcttcctc
cgcagaactgcacgtagcatcctggacatgccatggcaaattgtgcagattgcagagact
agtcaccctggtctgtacaagttatgggctgtaattggacacgacctccactgtatgaag
ctcaacatcccacgtgtcttctatgtcaaccagaaagtcccaaaacaggaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctccaacatcgtgtactacctttatgag
tactgtgtaccagaagacatgtaccaggagcacatcaatgagatcaacgctgacctgtcg
gccccagacattgaaggagtttatgaaacacaggtcccattgctgtttcgtgcactggtg
cagctcggatgtgtttgtatggtcaataaacatgttgtgagggatatggccggcagggag
gccgacacttttgacctggagcacctggagatgaggtctctggctcagttcagctacctg
gaaccagggagcgttcgccacatgtacctgtatcatcacagtcagggtcacaaggctctt
tttggcctgttcatcccctctcagcgcaaagccagcatctttgttctggacacagtcaga
agcaatcagatgcccaatctgactaacctctacacaactgaacgcactgctctactggag
aagacgaccgaggagcttctgcctccagagaaacacaactttgaggtccgagctgaaaac
gatgcaaaggctatttaccgtgcactgcagcgcatactcctgaactacaaggaggagcgt
cgtgggccaaccctcattgctgtgcagtcaaactgggagctgcggcggttggcagcaggg
atgccggtgcttgaggaatttccagttgttccagtgcatgtggttgatgagatcagctat
aatgtgctggactggcaacgccatggcgcccgacgcatgatccgccactacctcaacctg
gacagctgcctgtcacaggctttcgacatggccaggtattaccacttacctgttgggaac
ttgcctcaggatgtgtccatctttggctcagacttgttcctggcacgacatctacggaaa
cacaaccacctgctgtggctctcacccacagccagacccgacctgggaggaaaagaggct
gatgacagtcgtcttgtcatggaaagtgatgacaggggctccgtggagatcaatgctcaa
ggatgttattccacagtgtgtgtggagttggacctgcagagcctggcagtgaacaccatc
ctccaatcacagcatgtcaatgacatggaaggtggagctagtctgggtgtcagctttgat
gtgatccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctgtc
gctagctacgatgagaccgctctctgctccaacaccttcagaatcttgaagagcatggtg
gttggatgggtcagagagatcacgcagtaccacaacgtgtatgcagacaaccaggtgatg
cacttctaccgctggctgcgctcccccagctctctgctctatgaccctgcactgcaccgc
accctgcacaacatgatgaagaaggtgttcctacagttggtgtcagagttcaaacgtctc
ggctccactgtggtgtatggaaacttcaacaggatcatgttgtgcacaaagaaacggagg
atagatgatgccattggctatgtggagtacatcaccaacagcatccactccagagaaatc
ttccactctttgtccatctccttctcccgatgctgggagttcctgctgtggatggatccg
gccaactatggcggtgtgaagggtaaactgccctccagcgtcatgtatggagaggatgga
gccaaacaaaagaaaaagagtggcgaagagggagatgaggagggcagtgaggatgaagac
gaggatagagctgatgttgaggaagatgatggtgatggagagacagatgaggtggaggag
ctgattgagagcaactggaacatcatgcagtatttgccccaaactgcctcctgtcaaaaa
tacttcctcatgatcgtctctgcctacattgcagcggtctaccacagcatgaaagaggag
ctgagacgtaacgctcctggagcaacaccaatcaagagacgtggaggcagccaggcttcc
cagcaggccgtgggggatttgagcgctcttcctggaatgatctccttctcccaggaatat
gtgtccaacgagctgacacagaactttttcaccatcactcaaaaaatccaaaagaaggtg
acgggtaccaggagtgtcaaccagccctcggagatgttccccgtcctgcctggatcccac
ctgccgctcaacaacccagcactggagtttatcaaatatgtctgccaggtcctgtcactg
gatgccaacatagtgaaccaggtgaacaagctgaagagagacctcctgcgtctggtggac
gttggagagttttcagcagatgctcagttctgtgacccctgtaactcctacatcctgcca
gaggtcatctgccaccactgcaatttctgtcgtgacctcgacctctgcaaggacccatct
gtagcacaagacggatcagtgttgcctcagtggttctgctccaactgccaggcgcagtat
gagactgagtctattgagatggctctggtggaagctttgcagaagaaactgatgagctac
acgctgcaagacctggtgtgtacaaaatgtaaaggagtgaaggaagcaaacatgccgctg
tactgcagctgtgccggagactttgacctcactttcccagccaagagcttctctgagcag
atcacagtgtttcggaacatcgcgtcccactacaacatgagcttcctggaggagaccatt
gactggttgcttgtaatgagcccacacatcagccagagcgctcactga
DBGET
integrated database retrieval system
