Epinephelus fuscoguttatus (brown-marbled grouper): 125890842
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Entry
125890842 CDS
T08419
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125890842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125890842
Membrane trafficking [BR:
efo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125890842
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125890842
RAVE complex
125890842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125890842
NCBI-ProteinID:
XP_049435624
LinkDB
All DBs
Position
LG6:complement(30383193..30458980)
Genome browser
AA seq
3113 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVDCSSQGGQIAASYGSIVCVFEPVQLSDQKDTSLTKLNCQWQKTGQFVLRSMVRNLAW
HPTGSTLLTGSSSLQLWSNVDGVKDEAKEAGKETGMTIRDSRSTWSCIWQSKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSSVSRLFTPPEPSVSFQGELAFSFVYLAHPR
SVAGFTWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSGYHNNHAPGQHGE
APRCAGPSRKDTCNGKSHGRSAQELNFQESLLGSFYRDVPQPSLTSSLPHHQGRHYSHKR
SSSSMPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELHFT
LAMEVFLQQLRGSLEQQNECSNEEPEDEDNFDEEDNNSRPSGSQGPEAVELPLAAVKHQV
DVLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQTQVSFVSRIPVAFPTGDA
ISLSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYAGQGKAAPSSSLRLSIFT
PNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLT
TSHHNALRTPEADSILAPPDAYSSGFSQSASMPRGSRPSRVSLGVVSQDPNAIYSELILW
RVDPVGPLSLSGGVSELARINSLHASAFANIAWLPMLIPSSCLGVYCNSPSACFVASDGH
SLRLYQAVIEAKKLLSELSNPEISKFVGEVFNIISQQSTAKPGCIIELDAITDFQGKETQ
LLHVFEEDLILGKERTESAQETPASPHTASSEAAFSARFFLVVVELTPTGRSLLHMWHLH
LAARPITMEETTTEKDTTASASPLNSSTFSFDTFSSPVTQKSKPCTSNLQSACRLSLTTH
RLYSQELTLPDGVEAISVTPSAGHLSASCSLPADRVPYLIATSCSDEKVRFWRCNVIATE
PFSMDNLVYQWEEWPLLVEESTPNSSAVSVQGRPIEVSCCHSGRIAVAYRQMPNTPLNST
PYLNSHGLLTSPPTLASSPHVLYNSNNHHQTPTLTVQRSPNLTPIPNLANTREPLVHIGI
FQCESTGGSQWILEQTIVLDSTDPSTGNANIQSDMDSPIPNEYCPGSAGKSLVHLDWVSQ
EGGSHVLTVGIGTKIYMYGRLIGKPPELGLSSDASRDQSLSRLVLLRSVDLVSSVEGSLP
IPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPSKPNAAIAQDTDISSSVSSIISAVRQSQ
EDGLSAAAPTSSLAPPKRALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTL
PQYHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVTLKDNTTNPEKRLRSRTISAGGST
ARDRKMFSKAEKSTTDYTEISSIPPLPLYALLAADEDTSPKPDKVGSVSGDSGHGSTHAD
VYDELFHTPSIADLDPLDDDQEEMGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLT
RMEQMSLMALADTIATTSTDLTDSQGKSKAGGETLDECGLKFLLAVRLHTFLSTSLPPAH
RAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRR
CIEKVAKASLQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKA
ALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFETSST
YKKILQRHVLGQDKQIHAHQDPFLRSMAHWVLEDYSRALDTLLEQPANSTSSRSTESKCD
AGSSYVSACNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERRLFF
TAAYAHLQAGCPMLSLEVLSKMPKVRKHSKPPNQDGRGIASELSVGSKTGQTSDPDWSQP
ALNGYESDGNSLSNSHSDSVLSFDWSQPSLQLPDEPLELKWDSEKEEEEDDEEEEEAKNG
KSGRAADSNSVFQDTQDAMSPLMETVTGEDSEDCNDFIAPSDDILAAQLKFTACLKIMTN
ELRTLSTGYELDGGKLRYQLYQWLEREVVALQCCCSYRPCLPELSVQGDAPVSGLVEEEQ
PGSPRSDSQRRRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSI
LSAVTPCCQPTSIPLLMACTANVKTVVANPIVYLTNLAHDILQTINSLDSPPHPDVVNNE
IYVMHTLAASLSASIYQCLCDGHTQSHVNHFTGIVYQSVLLSQKHPVKTVSMDESVQPNT
SPAQWPGIASLIRMLSSAGEESQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAH
PLNSKLWVTVFGGGARTPVIEKPNSPIRATPPASPSGTERKSRRFRLLSSRSGSKDESGL
EREGPLSPKHGPVVEQGATSVFKEQFVPPELSIWDYFITKPSLPPSESRIEYDSEESQGS
EDEEEDDSECEDVFDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDL
PVGSPLCHAVLKTLQRWEQVLQKRLEIFGGPPSKYIATPLQDETTAPGPALLRHKALFEP
SNTPFRTSHHSALPVKRLWQFLVKQEEVQETFIRNIFTKKRDPNESGEDQPDNMKCSGME
ETGNNQTESDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILAT
QILTWIDDDDAEAKGVGDDFLVVHTRDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRG
AAVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRF
NHQGNKFGIVDADGGLSLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLST
DNRNVCLWDTLVTPANSLVHAFCCHDSGATVLAMAPRQQLLVTGGRKGWISILELAHRHQ
RQSFQAHDSPVKALAVDPTEDCFISGSAEGNIKIWSLATQCPLYTFPNEHARQSLFRNLG
TGVMQIEVGPASHIFSCGADGTMKMRILPNRFSVVNNNNNNHGNLKNDVKFII
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacaatgtgccattcacggcctatgcgtcaggttgtgacgtggtgattttg
ggcagtaactttgagcgactgcagatcatcccaggggccaaacatggcaacatccaggtc
gggtgtgtcgactgctcatcgcagggtggacagattgcagcttcctatggaagcattgtg
tgcgtctttgagcctgttcagctctcagatcaaaaagacacgtcactgactaagttgaac
tgccaatggcagaagactggtcaatttgtattacggtcgatggtacgaaacctggcctgg
caccctacaggcagcactctcctaacaggctctagcagcctccagttgtggtctaatgtt
gatggagtgaaagatgaagctaaggaagcaggaaaggagacagggatgaccataagagac
tctcgttcaacctggagttgcatctggcagagcaagacggcctctcctgtcagtttaatg
aagttctctcctgatggagaattctttgctactgctgggcaggacgactgcctcgtaaag
gtttggtacagcaccagtaagtggaagtcgagtgtttccagactcttcacaccaccagaa
cccagtgtcagtttccagggagagctggccttttcctttgtctacctggcccatcctcgc
tctgttgccggcttcacttggcggaagaccagcaaatacatgccacggggcgcagtgtgt
aatgttctgctcacctgctgcaaggacagtgtgtgtcggctttgggctgagacgctgttg
ccaggtgacagcctcctgtcgggttaccataacaaccatgctcctggccaacacggtgaa
gcacccagatgtgctggcccttctaggaaagacacctgcaatgggaagtcgcacggaaga
tcagcacaggaattaaatttccaagaatcactgctcggcagcttttatcgggatgtgccc
cagccctccctgactagctccctgcctcaccatcagggccgacactacagccacaagagg
agcagcagcagcatgccccatgccaacgctctctgccacttccacatcgctgccagcatc
aaccctgccacagacattcctctgctgccctctatctcctctctgagtgctgtggatgac
gaggaacctggaggtccatttactgtccactggctcaacaacaaagagcttcacttcact
ttagccatggaagtcttcctgcagcagctccgaggcagcctggagcaacagaacgaatgc
tccaatgaagagcctgaagacgaggataactttgatgaggaagataataatagcaggcca
agtggctcccaaggacctgaggctgtggagcttcctctggcagcagtgaagcaccaggtg
gacgtgctgttagaggagtggaataaaggggcggacatgttgttcagtatccatcccatg
gacggctcgctgttagtctggcatgttgactggttggatgaataccagccaggcatgttc
agacaaactcaggtgtcgtttgtgtcccgtatccctgtggcgtttcctacaggtgatgca
atctccctaagccacagtgtggttatgtatgcctgcaacaagaatgtggatcttgctatc
caacatggcagacagcggccgcctgggagcacattgcctcaaaccaaatctgctctaata
agctacgcaggtcaaggaaaagctgcacccagcagtagtcttcgactaagcattttcacc
cccaacgtccttatgatctccaaacacgccgatggctccctgaaccagtgggcggtcagc
tttgcagaggactctgctttctcaactgtgctcagcgtctctcacaagtcacggtactgt
ggccaccgcttccacctaaatgacttggcctgtcactcattgctccctctcctcctcacc
acctcacaccacaatgccctgaggacgccagaggcagacagcatcctggctcctccagac
gcctactcctccggtttctctcagtcagcgtccatgccccgagggtcacggcccagcagg
gtgtccctgggtgtggtttcccaggatcccaatgcgatctacagtgagctgattttatgg
agagttgaccctgtgggcccgctgtctttgtcaggcggggtctcagagctagctcggatc
aattctctccatgcatcagcatttgctaatatagcctggctgcccatgctcattcccagc
agctgtttaggtgtatattgtaactctcccagcgcctgcttcgttgcgagcgacggccac
tcactcaggctgtatcaggccgttatcgaagctaagaaactcctgagtgagctctccaat
cctgagatatcaaaatttgttggggaggtgttcaacatcatcagccagcaatccacagca
aaaccagggtgtattatagagctggatgccatcactgactttcaggggaaggagacccaa
ctcctgcatgtttttgaggaggatctgatccttggcaaagagaggacagagagcgcacaa
gaaactcctgcttctcctcacactgcctccagcgaggcagccttctcagcacggtttttc
cttgtggtggtcgaattgaccccgacaggtcgctcgctcctccacatgtggcatctccac
cttgctgctcgacccatcaccatggaagaaaccacaacagagaaggataccaccgcatca
gcgtctcctctgaacagctctacgtttagctttgacacgttcagttctccggtgactcag
aagagtaaaccctgcacttccaatctgcagagtgcctgtcgcctcagcctcacaacacac
agactatacagccaagagttgactctgccagatggagtggaggccatcagtgttacaccc
tcagcaggtcacctgagtgcgtcatgttctctgccagctgatcgtgtgccttacctcatt
gctacttcctgttctgatgaaaaggtgcgcttctggaggtgtaatgtcattgcaacagag
ccgttcagtatggacaacttggtgtaccagtgggaggagtggcctctgctggttgaggag
agcactcccaacagcagtgcagtaagcgtgcaaggtcgtcccatagaggtcagctgctgt
cactctggacgcattgcagttgcctacagacagatgccaaacacgcctctgaactcgaca
ccttatctgaactctcacggactgttgacttctcctcccaccctggcttcctcgcctcat
gtgctctacaacagcaacaaccaccaccagaccccaaccctgactgtacagcgcagccca
aatcttaccccaatccccaacctagcaaacactagagagccattggtccacattggcatc
ttccagtgtgagtccactggtggttcgcagtggattctggagcaaaccatagtcctggac
agcacagatccctcaactggaaatgccaacattcaaagtgacatggactcccctatacct
aacgagtactgtcctggttctgcgggtaagagtctggttcatttggactgggtctcccaa
gaaggtgggtcacatgttctgactgttggtattgggacaaagatttatatgtacggccgt
ctcattgggaagcctcctgaacttggcttgtcatctgatgccagtagagaccagagcttg
tctcgccttgttcttctgcgatcagtcgatctggtctcatctgtcgaaggctcactaccc
attccagtctctctctcctgggtacgagacggcatcttggttgtaggcatggactgcgag
atgcatgtctactcccagtggcagcccccagcaccttccaaacccaatgctgcgattgcc
caagacacagacatcagcagcagtgtctcctccataatctcagccgtcagacaaagccag
gaggatggtctcagcgctgctgccccaacttcttctcttgcccctcccaagagggccctg
acaagatcgatgatgagtctggcacagaagctcagtgggaagaggacagcttatgatctg
cctgtagagatggaagattctgggctttttgaagctgctcaccaactctttcccactctc
ccccagtaccatcctgtacaattactagagctcatggatctagggaaggttcaccgtgcc
aaagccatcctctcccatctggtgaaatgcattgctggagaaattgttacacttaaagac
aacaccaccaatcctgagaaacgcttgcgctcgcggaccatcagcgccggaggcagcaca
gcaagggaccggaagatgtttagcaaagcagagaaatccaccaccgactacaccgagata
agctccatccctcccctgccgttgtacgctcttctggcagcggatgaggatacatcacca
aaacctgataaagtgggcagtgtgagtggggatagcgggcatggctccactcacgctgat
gtttatgatgagctctttcatacacccagcattgcggacctggaccctctggacgatgat
caagaggaaatggggaacaaggttattgatctttcgcagtacagcccgacatattttggt
ccagaacacgcccaggtcctgtccagtcacctcttgcattctagtttgccaggcttaacc
cgtatggagcaaatgtctctcatggcgctggccgacaccatcgcgaccacaagcacagat
ctcacggacagccaaggcaagagcaaagcaggcggagagacgctggatgagtgcggtctt
aagtttttgctggctgtcagactccacaccttcctctccacctccctgcctccagcacat
cgagcacagctgctaaggcaaggcctgtcaacatgtcattatgcctgggccttccactct
gaggctgaggaggagctgctgaacatgctgccagccctacagaagggagagcccacctgg
cctgagctgcgctccatgggcgtcggctggtggctgcgcagcaccaacaagctacgcagg
tgtattgagaaggttgccaaggcttctttacagagaaacaatgatcctctggatgcagct
atattttaccttgcactgaagaagaaggcagtggtctggggattatacaggtctcagaag
aatgccaaaatgacagagtttttccgcaacaacttcagcgaggaccggtggaggaaagca
gcactgaaaaatgcgttttctctgttgggaaagcaacggttccagcattctgcagccttc
ttcctgctagccggctccctaaaggacgctgtggaggtgtgtatagagaaaatgcaggac
ctacagcttgccctggtgatctccagattgtatgagtctgagtttgagacatcgtccacc
tacaaaaagatcctccagagacatgttctgggacaagacaaacagattcatgcccaccag
gacccgttcctgcggagcatggctcactgggtcctggaggactacagcagagccttggac
actctactcgagcagcctgctaacagcaccagctccaggtccactgagagtaaatgtgac
gcgggttcctcctatgtgtccgcatgcaacccagaggttttcaacttctacacgtacctt
cgtacccacccacttctcctccgccgccattttggctcctcagacaaggctaaagttgga
ctgactgctgagggtcgcagggctgactccatcagcctagaggagaggagactgtttttc
acagctgcatacgcacacctacaagctggctgccccatgctatctcttgaagtcctctcc
aagatgcccaaagtccgcaagcattccaaacctcccaaccaggatggcaggggcatcgct
tctgagctcagtgttgggagcaagaccggacaaacatcggacccagattggtctcagccg
gctctgaacggctacgagtcagacggaaacagcttatccaacagccactcagattcagtg
ttaagttttgactggagccagccgtcacttcagctcccagatgagccgttggagctgaag
tgggacagtgagaaagaggaagaagaagacgatgaggaagaagaagaagctaaaaatggt
aagagcggtagagctgcagacagcaacagcgtgttccaagacacgcaggacgccatgtcg
ccgctaatggagacagtgacgggagaggacagcgaggactgcaatgacttcatagctcca
tctgatgacatcttggctgcccagctaaagtttactgcctgcttgaagatcatgaccaat
gagctacggacgctctcgacggggtatgaactggatggagggaagttgcgttaccagctc
taccagtggttggagagagaggtggtggctctccagtgttgctgcagctacaggccctgc
ttgccagagctgtctgtccagggtgatgcccctgtttctgggttggtggaggaggaacag
cctgggagtcctcgtagtgacagccagaggcgcaggagacactggctgcagagtaaccag
cctctactgaggatgtttctgagctattgcagtttgcatggctcccacggtggaggactg
gcctctgtgcgcatggagctcattttgttgcttcaagagtctcaccaggatgactccatc
ctgtcagcagtcacaccatgctgtcagccaacctctatccctcttctgatggcttgcacg
gccaatgtaaagacagtagtggccaatcccattgtctacctgaccaacctggctcatgac
atcttgcagaccatcaattcactcgactctcctccgcatcccgatgtggttaacaatgag
atctatgtgatgcacacgttggctgcctccctttcagccagtatatatcaatgtctgtgt
gatggacacacccaaagccacgtgaaccacttcacaggaatcgtgtatcagagtgttttg
ctgtctcagaagcacccggtcaaaactgtcagcatggatgagtctgttcagcccaacacg
tcgcctgcacagtggccaggtatcgcctctttgattcgcatgctgagctcagcaggcgag
gagagtcagccaggcttagctgtgctgctctgtgagatcctgactgctgtcttcctcagt
ctgtttgttcacggcatggccactcactccagcaacgagctgtttcgcatcgtagcccac
cccctgaacagcaagctctgggtgacggtgttcggagggggcgcccggacccctgtcatc
gagaaacccaacagcccgataagagcaaccccaccagcctcaccaagcggcacagaaagg
aagtccagaagattcagactcctgtcatcacgcagtggatccaaggacgagtctgggttg
gagcgggaaggcccactgagtcccaagcatggccctgtagtggaacaaggagctacctct
gtctttaaagaacaatttgtccctccagagctcagcatttgggattactttatcaccaag
ccctcgctgccaccatcagaaagtagaattgaatacgactcggaggagagccagggcagt
gaagatgaagaggaggatgacagtgaatgtgaagatgtgtttgatcccagttctccacaa
agagagcattcgaaccacaattcatacagttggtgtttgatgcgtctggcaatggttcag
ctggtgttggtcaacctcaagtccttttacccaatggcaggatatgatctattagatctg
cctgtgggctctcctctgtgtcacgctgtgctgaagacgctgcagcgctgggagcaggtg
ctgcagaaaaggctggagatctttgggggccccccttccaagtatatcgctacccccctc
caggatgaaacaaccgcaccaggccccgccctgctcagacacaaggccctgtttgaacca
tccaacaccccattcaggacgagccaccattcagcgctgccagtgaagcgcctgtggcag
tttctggtcaagcaggaagaagtgcaagagactttcattaggaatatcttcaccaagaaa
cgggacccaaatgagtcgggtgaggaccagcctgacaatatgaaatgttcagggatggag
gagacaggaaacaatcagactgagtcagatctgggctcccccggcggaaaagcacgcatc
atccacaaggaatctgacatcatcacagcctttgccatcaacaaggcaaatcgtaattgt
ttagtcatggcctccacccatgacattcaggagttagatgtgtcatccatcttggccaca
cagatcttgacatggatcgatgacgatgacgctgaagccaaaggtgttggtgatgacttc
ctggtggttcacacacgcgatgactttgccgccctccatggcaccacaccgtacactcac
agtagccccggtacacccatcaacatgccgtggctgggaggagtgcagacaggccggggt
gcagctgtgatgatcaagagaaatatcaacaatgtgagaaggatgacctcccatcccaca
ctgccttactacctgacgggagctcaggatggtagcgtcaggatgtttgagtggggtcac
tcccagcagatcatctgcttcagaagtccaggcaactccagagtcaccagaatacgattc
aatcaccagggaaacaagttcggtatcgtcgatgctgacggaggtttgagtctctggcag
accaatacaagtgggaatgcacccaaaccatacctgacgttgcagtgccacaacaagaca
gctcacgactttgtctttgtgggctcctcctccctcattgccactgcaggtctttcaaca
gacaacaggaacgtgtgtctgtgggacactctggtgactcctgcgaacagcttggtacat
gctttctgctgccacgactctggagccaccgtgctcgcaatggctcccaggcagcagctg
cttgtcacaggtgggaggaagggctggatcagcatcctggagctcgcccacaggcaccag
cgtcagagcttccaggcccacgactcgccggtcaaagcactggctgtcgatccgaccgag
gactgctttatcagcggatcagctgagggcaacattaagatctggagcctggccacacag
tgtccgctctacaccttcccaaacgaacatgctcgccagtcgctgttcaggaacctcggg
acgggtgtcatgcagatcgaggtgggaccggccagtcacatcttctcctgtggcgccgac
ggaaccatgaagatgaggatcctccccaaccgcttcagtgtggtcaacaacaacaacaac
aaccacggcaacctcaagaacgatgtcaagttcatcatatag
DBGET
integrated database retrieval system
