Epinephelus fuscoguttatus (brown-marbled grouper): 125890952
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Entry
125890952 CDS
T08419
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125890952
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125890952
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
125890952
NCBI-ProteinID:
XP_049435848
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All DBs
Position
LG1:complement(39987184..40047446)
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AA seq
636 aa
AA seq
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MVEPSPPALHLLSGGDVSMACIGVKVEQEESGGGGGVITCTEPLKTSPTRDWSGNHPLEA
RQLTPPLSRSPSEGSPGKELPLRQSPVGLKEARTHDRPEGQSNFKEVMPTIEKLLNADWK
EKLLDKSTVGAGQLKGTPEALAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHPNTQPLSVTSD
PQMTLPLQPIPCKPAVDYSMQLLQNPHPTPVKRSSGSFRQEASQPLNLTSKPKGLELGKT
PSPQSLELGSLALQGAYRSRDLHREVSHSPPRSALSFLGEGDVVTQAIHDAQQLLRGHST
GGRERDRDRERDGGGKMEYKDSPHSEKISSSERGENRHVPLSTEDHLSSDSEGALSVSVQ
SNYAEARPPPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKGMSNQE
KQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKNRRQEQRATYT
HSQTEPQQIHYSHSDGQYPGGASSVSVATMPFHPALLEHYLPQVPPTMRRAEGQATPTSL
PRERERERERERPPYSEGEESDAGERSEGELVLLTD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccagccctccagcactgcacctcctctcaggcggggatgtcagcatggcg
tgtattggtgtcaaagtagaacaggaggagtcaggtggtgggggtggagtcattacatgc
actgaacctcttaagacatctcccacacgtgattggtcaggaaatcatccactggaggcc
cgccaattgaccccaccactctcccgctccccttcggagggctctccaggtaaggagctg
cctctcaggcaaagccccgtgggactgaaggaggccaggacacatgatagaccagaagga
caatccaactttaaggaagtaatgcctaccattgagaagctgctgaatgctgactggaag
gagaaacttctggataaaagcacagtgggggcaggacaactgaaaggtaccccagaggct
ctggcagagaaggagctgcagttgttgatgatgatcaaccagctgagcggtttgagggag
caactactgggagcccactctgagcagaggaacatggccgccctgctgctggagaaacag
cagcagcagatggagctggctcgacaacagcaggaacagattgccaagcaacagcagcag
ctgatccagcagcagcacaagatcaacctgcttcagcagcagatccagcaggtgaatatg
ccctacgtgatgatccctgcgttccaccccaacacccagcctctctcggtcacctctgac
ccccagatgaccctaccactgcaaccaatcccctgcaagccagctgtggactattccatg
cagctgctgcagaacccacaccccacccctgtcaagaggagcagtggttccttccgacag
gaagccagtcagcccttgaacctgacctccaagccaaaggggctggagctggggaaaaca
cccagtcctcagagcctggagctgggatcactggcgctgcagggggcctacaggtccaga
gatctccacagagaggtgtcccacagcccgccacgatctgccctcagtttccttggagaa
ggcgatgtggtcacccaggccatccatgatgcccagcagctcctgagaggtcacagcacc
ggagggcgagaaagagacagggacagagagagggatggtggcggaaagatggagtacaaa
gattctccccacagcgagaaaatttcttcctccgagcggggtgaaaacagacacgttcca
ctgtccactgaggaccacctcagcagtgactctgagggtgccctgtccgtctcagtccaa
agcaactatgctgaggcccggccccctccctcctcaggccacatcaagagacccatgaat
gccttcatggtgtgggccaaggacgagcgcaggaggatcctgcaggccttccccgacatg
cacaactcctccatcagcaagatcctgggctccagatggaagggcatgtccaatcaagag
aagcagccttattacgaagagcaggcgaggctgagcagacagcatctggagcgctaccct
gactacaagtataagccccggcccaaacggacctgcattgtggagggacggaggctgagg
gtgggcgagtacaaggccatgatgaagaaccgccggcaggagcagagagcgacctacaca
cacagtcaaacagaaccgcagcagatccactattcccacagcgatggccagtacccgggt
ggtgccagctcggtctcagtggcaaccatgccctttcaccccgcattactggagcactac
ctgccacaggtgccccccacgatgcgtcgagcagagggccaggccacacctacgtccctg
cccagagaaagagagagggaacgagagagggagcggccgccgtacagcgaaggagaggag
agcgacgctggagagaggagcgagggggaactggtgctcctgacagactga
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