Epinephelus fuscoguttatus (brown-marbled grouper): 125891114
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Entry
125891114 CDS
T08419
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125891114 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efo03400
]
125891114 (xpc)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125891114 (xpc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
125891114
NCBI-ProteinID:
XP_049436063
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Position
LG7:16403153..16416148
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AA seq
957 aa
AA seq
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MAKRRESAETEADTKKLKQVLKAKSNGAKARAKKKDAGNSIMEEEENVKRKVKPKPRSST
KRAAGNVSSTPSTPTTAVKTSKYFQSPVTEEDSEDDFDMVTSPARVVMLNAKKTEKEVEE
EQDSEDDFEMVTSPARVVMVKAKQTKKEEREEEEEEEEDSEDDEDDWEEVEELSEPPGPV
EPPEPVLPSQPVEIEIETPEVRKRKKRQAEFETYLRRMMNRYKKDVLIDTHKVHLMCLIA
SGMFRSRLCSEPDLLAITLSLLPSHYSMVAKERIDQNYLSGLLKWFKATFTLNPSLPCEE
RPDPRALLERRLASLSARNHQEMTHLFLLVLRSLMLFCRLVLSLQPIPLKPPSAKGKGAK
TSPGAPKKSSTSQETSKTTSSKPKVSSGTKRPAGEGKVKGDRGGKKAKKKEIKEEDEEEE
KALTSGGQRPKNSKRRSIASKVSYKEESNSEGEQEEEGLSDEEFQATSEEDSEDSEGGAK
STKGKKGKGKSKNTAASKRRSSGGKKQLKDEEGKEQEEDDEEEVTTSNTTKRGGKKKEGP
GADEWLEVYLEKTSSWVCVDVEHGVGMPHLCSKNATAPVTYVVSVDGDGFVKDLGRKYDP
TWLTSTRKRRVDEDWWEETLEPLLGPEDERDRREDKELQKKLLSKPLPISITEYKNHPLY
ALKRHLLKYEAIYPQTATILGYCRGEAVYSRDCVHTLHSRDTWLKEARTVRIGEEPYKMV
KGFSNRSRKARMASEQKDEKDLALFGEWQTEEYQPPIAVDGKVPRNDYGNVYLFKPCMLP
VGCVHLRLSNLNRVARKLSVDAAPAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEE
QELQKQREREKKEKRALSNWTLLVKGLLIKERLKQRYGKKNHGLAHGEETGGFSSDEERV
EGESSSDKTAAETLAMSWPQNRQAEEDGGSISGLKKKTTTKREKRGQEKHMFPFEKV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagagagtgcagagacagaggccgatacaaagaaactgaagcaggtg
ctgaaggcaaagagcaacggagcaaaagcgagagcgaagaagaaagatgcaggtaatagc
atcatggaggaagaggagaacgtcaagaggaaggtcaaacccaaaccacgttcctccacg
aaacgagcagcagggaacgtctcttccaccccatccacacctaccaccgctgtcaaaacc
agtaagtacttccagtcgccagtgacggaggaggacagtgaagatgactttgacatggtg
acatcaccagcacgcgtggttatgttgaacgccaagaaaacagagaaggaagtagaggag
gagcaggacagtgaagatgactttgagatggtgacatcaccagcacgtgtggttatggtg
aaagccaagcaaacaaagaaggaagaaagggaggaggaggaggaggaggaggaggacagt
gaggacgacgaggatgactgggaggaagtggaagagctttctgagccgccgggtccagtt
gaaccaccagaacccgtcctgccctctcagccagttgagatcgagatcgagactcctgag
gtcaggaaaagaaaaaagaggcaggcagagtttgagacgtatctgaggcggatgatgaac
cgatacaagaaggatgtgctgatagatacacataaggtccacctgatgtgcctgatagcc
agtgggatgttccgcagccgtctgtgcagtgaacccgacctgctggccatcactctttcg
ctgctgccctcccactacagcatggtcgccaaggaacgcattgaccaaaactacctctct
ggtctgctcaaatggtttaaagcaacgttcaccctcaaccccagtcttccctgtgaggag
cgtccggatccccgggctctgctggagagacggctcgccagtctgtcagctagaaaccac
caggagatgactcatctgttcctgttggtcctgaggtctctgatgctcttttgcagattg
gttctttctttgcagccgattcctctcaaacccccatcagccaagggtaaaggggctaaa
acatctcctggtgccccgaaaaagagcagtacaagccaagaaacctcaaagaccacctcc
tctaagccgaaggtctcctctggcaccaaaagaccagctggagaggggaaggtaaagggc
gaccgaggaggaaagaaagcaaagaagaaagagataaaggaggaggatgaggaggaggaa
aaggctttgacatcaggaggacagagaccgaagaactctaaacgtcgcagcatcgcctca
aaagtcagctacaaggaagaaagtaacagcgaaggggaacaggaggaggaggggcttagt
gatgaggagtttcaggcgacaagcgaggaggacagtgaggattcagagggaggggctaaa
tccaccaaggggaagaaggggaaagggaagagcaagaacactgcagcttcgaagaggagg
agcagtggagggaagaaacagttgaaagacgaggagggcaaagagcaagaggaagatgat
gaggaagaagtaacaacaagcaacacaacaaagcggggtggtaaaaagaaggaggggcct
ggggcggacgagtggttggaggtgtatctggagaaaacttcgtcctgggtttgcgtagat
gtggagcacggtgttgggatgcctcatctctgctccaagaatgcaacagctccagtgacg
tacgtggtgtcagtggatggtgacggctttgtgaaggacctggggagaaagtacgacccc
acctggttgacatcgaccaggaagaggcgggtggatgaggattggtgggaggaaacgctt
gagccgttactggggcccgaggatgagagggacagaagggaggacaaagagctccagaag
aagctgctgagcaaacccttgccgatctcaataacagagtataagaaccacccgctgtac
gccttaaagagacacctgcttaaatatgaagccatctaccctcagacagccactatactg
ggatactgcaggggagaggcggtgtactccagggattgtgtgcacaccctgcactccaga
gacacctggctgaaagaggcacggactgtcaggataggagaggagccgtataagatggtg
aagggcttctcaaaccgttcccgtaaagccaggatggcatctgagcagaaggatgagaaa
gacctggctctgtttggagagtggcagactgaagagtatcagccgcccatagctgtggat
gggaaggttccccgaaacgactatggtaacgtctacctgtttaagccctgtatgttaccg
gtgggctgtgttcacctcaggctgtctaaccttaaccgcgtggccaggaagctgagcgtg
gacgccgcccctgcggtcacggggtttgacttccatggaggatactcgcatgctgtgact
gatggttacattgtgtgtgaggagcatgaagagattctcagagcagcctgggtggaagaa
caagagctccagaaacagagggagagagagaaaaaagagaagagagcgctctccaactgg
actctgctggtgaaggggctcctgatcaaagaaagacttaagcagcgttatggaaagaag
aaccatggactcgctcatggagaggagaccggcgggttttcgtcagatgaggagagggtt
gagggcgaaagttcttcagataagacggcagctgagactttggccatgtcctggccccag
aacagacaagcagaggaggatggagggagcatcagtggactgaagaagaagacgacgaca
aaacgtgaaaagagaggacaagagaaacatatgttcccttttgagaaagtgtga
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