Epinephelus fuscoguttatus (brown-marbled grouper): 125891568
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Entry
125891568 CDS
T08419
Symbol
hdac6
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125891568 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125891568 (hdac6)
04131 Membrane trafficking [BR:
efo04131
]
125891568 (hdac6)
03036 Chromosome and associated proteins [BR:
efo03036
]
125891568 (hdac6)
Enzymes [BR:
efo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125891568 (hdac6)
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125891568 (hdac6)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125891568 (hdac6)
Membrane trafficking [BR:
efo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125891568 (hdac6)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125891568 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
CMI2B-like
Motif
Other DBs
NCBI-GeneID:
125891568
NCBI-ProteinID:
XP_049436900
LinkDB
All DBs
Position
LG7:complement(45508436..45524625)
Genome browser
AA seq
1102 aa
AA seq
DB search
MPSGSDSSGSGLKSVRRSPRLSPQSSNSSSSKGKEERKGGGALQEAKRRGRMERSREEDE
ELSDKLQTLDLSSRSAVSGTGLVYSEIFTHHKNLWDDSHPECPDRVTSIMEELKRQELLS
HCIRVEPREASEDELLLAHRKDYVELMKSTQTMTESELQTLSEKYDSVYLHPESFQVSVL
AVGSVLQLVDQVMTSDLRNGFAVIRPPGHHAQSNEANGYSVFNNVAIAARYAQTRHSISR
VLIVDWDVHHGQGIQYQFQEDPSVLYFSVHRYEQGSFWPHLSESDSQFIGSGRAEGRNIN
LPWNKTGMTDALYIIIXIYVCVQFQPQLVLVSAGFDAAVGDLKGEMCVSPQCFHVLTHML
MSLAEGRLVLALEGGYNLQLTAEGAAACIRALLGGACPPLTPPTAPSDSALQSISQTVSA
LYPHWASLQTLEGGPFAEGRVIRATTNKHSTKQTDHAPSVTTTTGLVYDESMMEHLNMWD
RHHPEQPQRIFKIFSKHQQLGLVDRCQRIPARLATEEELSRCHSVQHIEQMKATAAMKPR
DLYKLGNEFNSIYINNQSFQSALLAAGSCFTAVERILTGQVSNGVAIVRPPGHHAEKDFP
CGFCFFNTAALTARHAQKISHDAPLRVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYDN
GMFFPSSIDAAPDRVGVSKGAGFNVNVAWSGGRMGDSDYLAAFHRVVMPIATEFNPGLVL
VSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLTSISDSMAMCTS
VLLGDPPPSLVSPLPPPHHCAVTAINEVIRHHAPYWSSLRIHIPESVRTSLPALKHRGKR
SSKGHGRKSEQSSADKPPLPPAGSEELSTEGGLEQLTQGLASLDITETSANNPPATSTPV
GGARPKVRPSSEKVTCEGEVKAESCDVTPEQSQSATSTQPQAVAVAASESVASGDKAADG
AGAEPETEGACGWSKPETSLELISGGQTDTLFVVDPLPWCPHLDAVKPLPPSGIDIFQPC
QDCGSDAENWTCLTCYQVLCGRYVNEHMVNHGVVSEHPLVLSFSDLSVWCYLCEAYIHNQ
ILFEAKNAAHCAKFGEEIPPWS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccggatcagactcctcaggatctggactgaagtcagtcagacgatctcctcgt
ctgtctcctcagagcagcaacagcagcagcagtaaaggaaaggaggagaggaaaggagga
ggcgctctgcaggaggcgaaaaggagagggaggatggagaggagcagagaggaggacgag
gagctgagcgataaactgcagacgctggatctgagcagcaggtcagcggtcagtggaaca
ggtctggtttactctgagatcttcactcatcataagaacctgtgggacgacagtcatcca
gaatgtcccgacagagtgacgtccatcatggaggagctgaagagacaggagctgctgtcg
cactgcatcagagtggagccccgagaggcctcagaggacgaactgctgctggctcacagg
aaggattatgtggaattgatgaagtcgactcagacgatgacagaaagtgaacttcagact
ctgtctgagaaatacgactctgtttacctccatcctgagtccttccaggtgagtgtgtta
gcggtgggttcagtcctccagctggtcgatcaggtgatgacctctgacctcaggaatgga
ttcgctgtcatcagacctccaggtcatcacgctcagtcaaatgaggcaaacggttactct
gttttcaacaacgtggcaatcgcagctcgatacgctcagaccagacactcaatcagcagg
gtgttaatagtggactgggatgttcatcacggtcagggcatccagtaccagttccaggag
gaccccagtgtgctgtacttcagtgtccacaggtatgagcaggggtctttctggcctcac
ctgtctgagtctgacagtcagttcatcggcagtggacgagctgaaggcagaaacatcaac
ctgccctggaacaagacggggatgacagacgctctttacatcattatataaatatatgtg
tgcgttcagtttcagccccagctggttctggtctcagctggatttgatgctgcagttgga
gatctgaagggggagatgtgtgtgagtcctcagtgtttccatgttctgactcacatgctg
atgagtttggctgaaggtcgactcgttctggctctcgagggaggttataacctgcagttg
acagcagagggcgctgcagcctgtatcagagctctgctgggaggagcctgtcctcctctg
accccgcccaccgctccgtctgacagcgccctgcagtcgatctctcagaccgtctcagct
ctgtatccacactgggcctctctgcagacgctggaaggcggcccgtttgctgaggggcgt
gtcatcagagcaacgaccaataagcacagcacaaagcagactgaccacgccccctccgtt
accacgacaacaggtctggtttatgatgagagtatgatggagcacctgaacatgtgggac
agacatcatcctgaacagcctcagagaatcttcaaaatcttctccaaacatcagcagctg
ggattggtcgaccgttgccaacggataccagctcgcttagcgacagaggaggagttgtcc
aggtgtcacagtgtgcagcacattgagcagatgaaggccacagcagcgatgaagcccaga
gatctgtacaaactaggaaacgagtttaactccatctacatcaacaaccagagcttccag
tctgccctgctggctgctgggagctgtttcactgcagtggagaggatcctcacaggacag
gtgagtaacggcgtggcgatcgtgcgtcctcctggtcatcacgcagagaaagattttccg
tgtggtttctgtttcttcaacacggcggcgctcactgctcgccacgcccagaaaatctcc
cacgatgcaccactgcgagtccttatcctggactgggatgttcaccatggcaacgggacg
cagcacatgtttgaggacgatgacagtgtcctgtacatctccctccatcgctacgacaac
gggatgttcttcccgtcttcgatagatgctgcccctgacagagtgggcgtgtccaagggg
gcagggtttaacgtgaatgtggcatggagtggcgggcggatgggtgactccgactacctg
gcagcctttcaccgggttgtcatgccgatcgcaactgagtttaatcccggcctggttctg
gtgtcggccgggttcgatgcagctcggggggatccgctgggtggatatcatgtgacccca
gagggatacgcccacctcacacacctgctgatgtcactggcgggggggcgggtcctactc
atattggagggaggttataacttgacgtccatctctgactccatggcgatgtgcaccagc
gtgttgctaggagacccccctccctccttggtgtcgcccctcccccctccacatcactgt
gccgtgacagcgatcaacgaggtcatccgacaccacgccccctactggagttcgctgagg
atacacatcccagagtctgtgcggacgtccctacctgccctgaagcatcgtgggaaacgt
agttctaaaggacatggaaggaagtcagagcagagcagcgcagacaaaccaccgctgccc
cctgcaggatcggaggaactatcaacggagggtggtctggagcagctcactcaggggttg
gccagtttggacatcactgaaacctcagccaataaccctcctgctacgtccacccccgtg
ggcggggccagaccaaaggttcgccccagctcggagaaggtcacctgtgaaggtgaagtg
aaggcggagtcttgtgacgtgacacctgagcagagccaatcagcaacaagtacccagcct
caggctgttgccgtggcagcatcagagtcggttgcctccggagacaaggctgctgatgga
gcgggggcagagccagagacagagggagcgtgtggttggtcgaagcctgagacgtctctg
gagttgatttctggaggacagacggacactctgtttgtggtggaccctctgccctggtgt
cctcacctggatgctgtgaagcccctccccccctcaggtatcgacatcttccagccgtgt
caggactgcggctctgacgctgagaactggacctgtctcacctgctaccaggtgttgtgt
ggtcgttacgttaatgagcacatggtgaatcacggtgttgtttctgaacatccgctggtg
ctgagcttcagtgacctgtcggtgtggtgctacctgtgtgaggcctacatacacaaccag
attctgtttgaagctaaaaacgctgctcactgcgccaagtttggagaagagatccctcca
tggagctga
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integrated database retrieval system
