Epinephelus fuscoguttatus (brown-marbled grouper): 125891927
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Entry
125891927 CDS
T08419
Symbol
ddx23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125891927 (ddx23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efo03041
]
125891927 (ddx23)
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125891927 (ddx23)
Spliceosome [BR:
efo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125891927 (ddx23)
Complex C
U5 SnRNP specific factors
125891927 (ddx23)
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Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125891927
NCBI-ProteinID:
XP_049437489
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Position
LG7:32588309..32596362
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AA seq
805 aa
AA seq
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MAADSTDKKDAESSGTKDRERKRSRSRERDRKGSPSRKSRRSRERNRSKSPDRERRKDKD
RDKERDRDKDRERGRKDRDSHRRDKDRSKRSRSLSPKSKDVKLKRERDIKTEEEEDEKKK
KEKVQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRELQTEERRKMLEDERKKR
RVFQDMGRKMLEDPQERERRERRERMERENNGNEDDDGRQKLREEKDKSKELHAIKERYL
GGLKKRRRTRHLNDRKFVFEWDASEDTSVDYNPIYKEKHHVQLYGRGFIAGIDLKQQKRE
QSRFYGDLMEKRRTLEEKEQEETRLKKMRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFRE
DYSITTKGGKIPNPIRNWKEYSLPAHILEVIDKCGYKDPTPIQRQAIPIGLQNRDIIGVA
ETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPL
GIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLGRCTYVVLDEADRMI
DMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMMMNFESGKHKYRQTVMFTATMPPAVER
LARSYLRRPAVVYIGSAGKPHERVEQKVLLMSEGEKRKKLLEVLSHGFEPPIIIFVNQKK
GCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSM
VLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSAVFYDLKQAILESPVSTCPPEL
ANHPDAAHKPGTILTKKRREETIFA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgactccacagacaagaaggatgctgaatcctcagggaccaaagacagagag
aggaaacgtagccgttcacgagaacgagatcgtaaaggctcaccttctcgcaaaagccgt
cgttctcgtgaacgaaatcgctcaaagtctccagatagagaacgacgcaaagacaaggac
agagacaaggagcgtgacagagataaggacagagagagaggccgtaaggacagagacagc
catcgacgtgataaagatcgcagcaagaggtccagaagtctttctcctaagtcgaaagat
gtcaaattaaagagagaaagggatataaaaacagaagaggaggaagatgaaaagaagaag
aaagagaaggtccagcctttatctttggaagagcttctcgccaagaagaaggcagaagag
gaggcagaggcgaagcccaagttcctctccaaggcagagcgagaagctgaggctctgaaa
cggagggagttacagacggaggaaaggaggaagatgctggaagatgagagaaagaagaga
agggtattccaggacatgggcagaaaaatgttggaggaccctcaggaacgtgagaggcga
gaacgaagagagcgaatggagcgagagaacaacgggaatgaagacgatgacggacgacaa
aagctgagagaggagaaagataaaagcaaagaacttcacgccatcaaggagcgttacctg
ggtgggctgaagaagcgccggagaactcgtcacctgaacgacaggaagtttgtgtttgag
tgggacgcctctgaagacacttcagtcgactacaacccgatttacaaagaaaagcaccat
gtgcagctgtacggacgaggcttcatcgctggcatcgacttgaagcagcagaaaagagag
cagtcacgtttctatggtgacctgatggagaaacggcggacactagaagagaaggagcag
gaagagacgagactgaagaagatgcgtaagaaggaggcgaagcagcgctgggacgacaga
cactggtctcagaagaagctggacgagatgacagacagagactggagaatcttcagagag
gactacagcatcaccaccaagggaggaaagatcccgaaccccatcagaaactggaaggag
tattcgctgcctgcacacatcctggaggtcatcgacaagtgtggctacaaggatccaaca
cctattcagaggcaggccattcctattggtctacagaaccgtgacatcattggtgtggct
gagacaggtagcggtaaaacagctgctttcctgattccactgcttgtctggatcaccacc
ctgccaaagatcgacaggattgaagattcagatcagggtccctatgctgtgattctggcc
ccaactcgtgagttagcacagcagatcgaggaggagaccataaagttcggtaaaccgctc
ggtatccgaacagtggctgtgattggaggaatctccagagaggaccagggcttccgtctc
aggatgggctgtgagattgtgatcgccacccccggtcgtctgatcgacgtgctggagaac
aggtacctggtcctgggccgctgcacctacgtcgtcctggatgaggctgatcgtatgatt
gacatgggcttcgagcccgacgtccagaaaatcctggagtacatcccagtgacgaatcag
aagccagacacagacgaagcagaggaccctgagaaaatgatgatgaactttgaatctggg
aaacacaaatacagacaaacggtcatgttcacagccactatgcctccagctgtggagaga
ctggccaggagctacttgagacgtcctgctgtggtgtacatcgggtctgccggcaaacct
cacgagagagtggaacagaaggtgttgctgatgtcagagggagagaagaggaagaagctg
ctggaggtgttgtcacatggcttcgagcctcccatcatcatcttcgtcaaccagaagaag
ggttgcgacgtgctggcaaagtctctggagaagatggggtacaatgcttgcacgctgcat
ggtggcaaaggccaggaacagagagagtttgcgctctccaacctcaaggcaggagccaaa
gatatcctggtggccacagacgttgcgggtcgtggtatcgatatccaagacgtttccatg
gtgcttaactacgacatggcgaagaacattgaagactacatccatcgtattggtcgtacg
ggtcgtgctggtaagagtggtgtcgccatgaccttcctcaccaaagaggactcggcggtg
ttctacgacctgaagcaggccatcctggagagtcccgtctccacctgccctccagagctg
gccaaccacccggacgctgcgcacaaacctggaaccatcctgaccaagaagaggcgcgag
gagaccatctttgcctaa
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