Epinephelus fuscoguttatus (brown-marbled grouper): 125891955
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Entry
125891955 CDS
T08419
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03083
Polycomb repressive complex
efo04980
Cobalamin transport and metabolism
efo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125891955 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125891955 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125891955 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125891955 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125891955 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125891955 (hcfc1b)
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125891955 (hcfc1b)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125891955 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
125891955 (hcfc1b)
MLL-HCF complex
125891955 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125891955 (hcfc1b)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125891955 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
125891955
NCBI-ProteinID:
XP_049437542
LinkDB
All DBs
Position
LG7:complement(45430224..45448494)
Genome browser
AA seq
1523 aa
AA seq
DB search
MASEPAVVQPRWKRVLGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPAVRGDVPPGCAAYGFACDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKHLKAKA
PKNGPPPCPRLGHSFSLIGSCCYLFGGLANDSEDPKNNIPRYLNDLYRLELRPISSVVGW
EIPTTSGPPPPPRESHTAVVANGRNGNRLIIYGGMSGCRLGDLWVLHTDSLTWSKPALNG
TAPLPRSLHSATTINNKMYVFGGWIPLVMDDVKVATHEKEWKCTNTLACLNLDSMCWETV
LMDSLEENVPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCAPSR
VQLVRANTTSLEVSWGPSQTAETYLLQVQKYDIGSPASSPAPNPIPTATPATSSPKTPAP
ITMPPANQTVPLSGITLVPSPTASVPGSPLAATAKSPAVLRMAAAPGAAGGPSIVTVRQA
APKSPVTVTTLPAGVRMVVPAQAGQGTPTGSSPQMSGMAALAAAAAATQKIPPSTATVLN
VPAGATVVKTVSNPATRMLKTAAAQVGGVPVVSTPGTPGRPIITVHKSGTVTVSQQAQVV
TTVVGGVTKTITLVNSPLSVGGGGALIGNLGNLGKMMSVVQTKPVQSGAATGQTVGNPVT
QILQAKAGLPAGTILKLVTSADGKQTTILSTAQAGVAPATSKPGTTYIKTIPVSALQGGA
GANSPITILTTKMVTPGTAGTIITTVPKISAGGQQGLTQVVLKGAPGTPGSILRTVPMGG
VRLVSPGVGGAKPTVTTLVVKGTTGMSSQGTVTGSISTTVAGGAVSAANASLATPITTLA
TIATLASQVTTATAAAGHKQVTLITTPSGAEAQPLVQDLPVTFMASPTSEEPGSTTSTTT
TATAAATMGGSDRVCSNPPCETHDTGTTNTATVATATMGGNDRVCSNPPCETHDTGTTNT
ATVASATMGGNDRVCSNPPCETHDTGTTNTATTAGAGGLRQVCSNPPCETHETGTTNTAT
TATAQQGGDGLQGDAASSSSDPTSSMSDTASSTTASQSRAVTTVTQATPTPGPSIPEISS
LVRAESSDAVAMATAAAAEEGEEPMQMAVPVLQVHMEGSAAAAQTDGLPQELMSSEGDGG
EEVSGATTLMVTGLTSDQLAVTTATEEAVQQATIRAVLQAAAQMGGGAVDQSIPIVLTQQ
ELAALVQQQQDIHNHPESEPAEQSSVPTEGLAPADSLNDPSAESTQLTSSAVTSAVARLA
STFGPAPPLTSGGVIKIEPTASEVTNGVAAAAGKQKVTSSAKESRWYDVGIVKVTNMVVT
HYYVPYDDNMADDDSGVVPDYSQMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCL
PGFPGAPCAIKISKNLDGAQLTWEPPAVTSGRITEYSVYLAIQSSQATSSGSGAAQLAFM
RVYCGPTPSCLVQSTSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQDSSKDNKP
AVKRPGASPDVKPVGPKKFKTDQ
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaacctgcggtggtgcagccccgctggaagcgcgtcctgggctggaccggc
ccggtcccacggccccggcacgggcaccgagccgtggctatcaaggagctaatggtggtt
ttcggcggagggaacgaggggatcgtggatgagctgcacgtttataacaccgccaccaac
cagtggttcatccctgcagtgcgaggcgacgtcccccctggatgtgccgcctacggcttc
gcatgtgacgggacaaggctgctggtgtttggagggatggtcgaatatggaaaatacagc
agtgacctgtacgagctgcaggcgagtcgttgggagtggaaacatctaaaggccaaggct
ccaaagaatgggccgcccccctgcccccgcctcggacacagcttctctctgattggcagt
tgctgctacctgtttggaggactggccaatgacagtgaagaccccaagaacaacatcccc
aggtatctgaacgacctgtaccgtctggagctgcgaccgatctccagcgtggtcggctgg
gagatcccgacaacttcaggtccgccgccgccacctagagagagtcacacggctgtggtg
gcgaatggtcgcaacggcaacagactcatcatctacggagggatgagcggctgcagactg
ggagacctgtgggtgctccacacagattctctgacgtggagtaaaccggccctaaatgga
accgcccccctcccccgcagcctgcactctgccaccaccatcaacaacaagatgtatgtg
tttggaggttggattcctctggtgatggatgatgtcaaagtggcaactcatgagaaggag
tggaagtgtaccaacacactggcctgtctcaacctggactcgatgtgttgggagacggtc
ctgatggacagtctggaggagaacgtccccagagctcgagcaggtcactgcagcgtggcc
atcaactcaagactctacatctggagcggcagagatggatacaggaaggcctggaacaac
caggtgtgctgcaaggacctctggtacctggagacagagcgtccctgcgctccctcccgg
gtgcagctggtccgagccaacaccacgtctcttgaggtgagctggggtccatcacagaca
gctgagacttacctgctgcaggtgcagaagtacgacatcggctcacctgcctctagcccc
gcccccaaccccatccccactgccacacctgcgaccagctcccccaagacccctgccccc
atcaccatgccaccagctaaccaaactgtcccgctgtctggcatcacgctggttccctcc
cccactgcctccgtacctggaagcccattggctgccactgccaaatcaccagctgtcctg
aggatggcagcagctccaggtgcagcaggcggaccctccattgtcacagtgagacaggct
gcgccaaagtctccggtcaccgtgacgacacttcctgcaggtgttcgtatggtcgtaccc
gctcaggctggtcaggggacgccaacaggaagcagtcctcagatgagtggtatggctgca
ctggcggcggcggctgcagcgacccaaaagatccctccatccacagcaacggtgctcaac
gtccccgctggagcaactgttgtaaagacggtgagtaacccggccactagaatgctgaag
actgctgctgctcaggtgggcggagtccctgtagtctccacccccgggacccctggccga
ccaatcatcacagtgcacaagtcgggcacggtgacggtgtcccagcaggctcaggtggtc
accacagtggtgggcggagtcacaaagaccatcacactcgttaacagtcctctcagtgtg
ggaggaggcggggctctgatcggtaaccttggtaacctggggaagatgatgtccgtggtt
cagaccaaaccagttcagagtggagcagctactggtcagactgtgggcaacccagtcacc
cagatcctccaggcgaaggccggcctcccagcagggaccatcctgaagctggtgacctca
gcagacggtaaacaaaccaccattctcagcaccgcccaggctggtgtcgccccggcaacc
tccaaacctgggactacctacattaagaccatcccagtgtcagcactgcagggtggggca
ggtgccaacagtccaatcacaatcctgaccaccaaaatggtgacaccaggtactgctggg
acgatcatcaccactgtccccaagatctctgcaggcggccagcaggggctcacacaggtg
gtgctaaaaggagctccggggacgcctggttcaatcctcaggaccgtcccaatgggcgga
gtcagactggtgtcaccgggagttggcggcgccaaacccaccgtcaccacactggttgtc
aagggaaccacaggtatgtccagtcaggggacagtaacaggaagtatctccaccacagtg
gcaggaggagctgtttcagctgctaatgcctccctggcaacacccatcacaaccctggca
accattgccacgctggccagccaggttactacagcaactgcagcagcgggacataaacag
gtgactctgatcacgactccgagtggtgccgaggctcagccgctggtccaagatctgccc
gtcaccttcatggcttcacctacctcagaagaacctggaagtacgacaagtactactaca
actgctactgcggcggcaaccatgggcggcagtgatagagtgtgctccaacccgccctgt
gagacccacgacacgggaaccaccaacaccgccacagtcgccacagcaaccatgggtggc
aacgacagagtgtgctccaacccgccctgtgagacccacgacacaggaaccaccaacacc
gccaccgtcgcctcggcaaccatgggtggcaacgacagagtgtgctccaacccgccctgt
gagacccacgacacaggaaccaccaacaccgccaccacagctggagcgggaggacttcgt
caggtgtgttcaaatcctccgtgtgagacccatgaaacaggaaccaccaacaccgccacc
acagcgacagctcagcagggtggagacggtctgcagggagacgccgcctcctcctcatct
gaccccacctcctccatgtccgacactgcctcctccaccacagccagtcagagcagagct
gttaccacggttacacaggccacacccacccctggcccatctatacctgagatctcctca
ttggtcagggcagagtcctctgatgctgttgccatggcgacagcagcagcagcagaggag
ggggaggagcctatgcagatggcggtcccagtgttacaggttcacatggagggcagcgca
gcagcagcacagacggacggtctccctcaggagctgatgtcatcagaaggggatggaggt
gaggaggtctccggggctacgaccctgatggtgacaggactgacctccgatcagctggct
gttaccacggcaacagaggaggcagttcagcaggcgaccatacgggcggtcctgcaggca
gcagcacagatgggagggggggcggtggatcagtccatccccatcgttctgacccagcag
gagctggcagctctggtccagcagcagcaggacatccacaaccatccagagtcagagcca
gcggagcagagcagcgtgcctacagagggccttgctccagcagacagcctgaatgacccg
tcagcagagagtacccagctgacatcatcagcagtgaccagcgccgtagctcgattggcc
agtacgtttggacccgccccgcctctgacttcagggggcgttatcaagattgaacctacg
gcctccgaggtgaccaatggtgttgcagcagccgcagggaagcagaaggtgacatcatcg
gcgaaagaaagtcgctggtatgacgtcggcatcgtcaaggttaccaacatggtggtcaca
cattactacgtcccctacgatgacaacatggccgacgatgactcaggtgtggtcccagac
tacagtcagatgaggaaggtggagctgcagccggggacagcgtataagttccgtgtcgca
gggatcaatatctgcggccgcggagcgttttccgaggtgtcggccttcaaaacgtgtctt
cctggtttccctggagcgccgtgcgccatcaagatcagcaagaacctggacggggcccag
ctgacctgggagcctcctgcagtcacgtcagggaggatcacggagtactcggtgtacctg
gccatccagtccagccaggccacctcctccggctcaggtgcggcccagctggccttcatg
agggtgtactgcggccccaccccgtcctgcctggtccagtccactagcctcgccaacgcc
cacatcgactacaccaccaagcccgccatcatcttccgcatcgctgctcgcaatcagaag
ggttacgggccggccacgcaggtccgatggctccaagacagcagtaaagacaacaaacca
gctgtaaagagaccgggagcctcgcctgacgtaaaacctgtcgggccaaagaagttcaaa
actgaccaatag
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integrated database retrieval system