Epinephelus fuscoguttatus (brown-marbled grouper): 125892181
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Entry
125892181 CDS
T08419
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03250
Viral life cycle - HIV-1
efo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125892181 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125892181 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efo03400
]
125892181 (samhd1)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125892181 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
HD_assoc_2
DUF5525
Motif
Other DBs
NCBI-GeneID:
125892181
NCBI-ProteinID:
XP_049437951
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All DBs
Position
LG7:27003254..27020755
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AA seq
624 aa
AA seq
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MENRKRPLEAVVTPNDSYQTPEKKVSVVRLLDSDYTQWEVAETCHYLRTEGLGEWEDAFR
AQKITGVGLRYLSDADLERIGVQCLGDRLKILHSLRKLWQIEAEPNKVFNDPIHGHVELH
PLLIKIIDTPQFQRLRNLKQLGGTYFVFPGASHNRFEHCIGVGYLAGRLVQALNQRQPEL
LISRRDILCVQIAGLCHDLGHGPFSHMFDGQFIPKARPGIGWKHEKASLDMFDYLVNDNG
LKPVMQQHGLVLPEDLDFIKEQIAGPLDPSGAQGKKWPYKGRPEDKSFLYEIVANKRNGI
DVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCEVDGQKHICTRDKEVGNLYDMFHTRNC
LHRRAYQHKVGNIIETMITEAFLKADKHIQIEGSGGKMFTLSTAIDDMEAYTKLTDHVFE
QILYSSSPELAESRQILRNIICRRLYKCLGQTQAKKPVKVTREMIQSWEADLAQSIPQSS
SQDVSLQPEDFVVQVIFMDYGMGEENPINNVRFYCKDDLTTAIQIRKNQVSKLLPEQFAE
QLIRVYCKKTDDRSLEAAKKHFVLWCIKKDFSKPQDGDIIAPELTPLKASWANNNEGEDG
KAGSSRRVNCVNGHEKAKVHLSFH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgaaaacgaccgttagaggcagttgtgacccctaatgacagctaccaaacg
ccggagaagaaagtgtcagtggtccggctgctggactcggactacacgcaatgggaagtg
gcggaaacgtgtcactacctgcgaacagagggtctcggagaatgggaagatgcatttaga
gctcaaaaaatcacaggtgtcgggctgcggtatctcagtgatgctgacctggagaggatt
ggcgtacagtgccttggtgaccgtctaaagatcctacacagcctcaggaagctgtggcag
atagaagcagagccgaataaggtgtttaacgatcccatacacgggcatgtggagctgcac
cctcttctcatcaaaatcattgacacacctcagttccagagactacgaaacctcaagcag
cttggagggacctactttgtttttcctggagcatcccacaaccgctttgaacactgcatt
ggggtgggttacttggcagggcgtcttgtacaagctctgaatcagaggcagccagaactc
cttatctcacgcagagacatcctttgtgtgcagatcgctggtctctgccatgacctggga
catgggccattttcccacatgtttgatggacagttcatccccaaagcacgtccaggaatt
gggtggaagcatgagaaagcctctctagacatgtttgactacctggtaaatgacaatggc
ctgaagccggtgatgcagcagcacggcctggtgctaccggaggacctagactttataaag
gaacagattgctggaccattggatcccagtggagctcaaggcaagaagtggccatataaa
ggtcgtccagaggacaagtccttcctttatgaaatcgtggccaacaaaagaaatggcatt
gatgtagacaagtgggactactttgccagggactgctaccacctgggcatccagaacaac
tttgactaccgccgcttcctaaagtttgccagggtgtgtgaggtggacgggcagaagcac
atctgcacaagagacaaggaggtgggcaacctgtacgacatgttccacacaaggaactgt
ctccacagaagagcctaccagcacaaagtgggcaacatcatagagactatgatcacagag
gcctttttaaaagcagacaagcacatccagattgaaggctcaggagggaagatgttcact
ctctccacagccatagatgacatggaggcctacaccaagctgacagatcatgtgtttgaa
caaatactctactcctcctccccggagctggctgaatcaaggcagattctacgcaacatc
atctgtcgacgcctctacaagtgtctgggccaaacccaggcaaagaaacctgtgaaagta
acccgggagatgattcaaagctgggaggcagatctggctcaatccatccctcagagcagc
tcccaggatgtcagtctgcagccagaggactttgtcgttcaagtcatttttatggactat
gggatgggggaagagaaccccatcaacaatgtgcgtttctattgcaaggatgatctgacc
acagccatccagattcgcaagaaccaggtgtctaaacttctcccagagcagtttgcagag
cagctcatcagagtttactgcaagaaaaccgatgacaggagtctggaggcagccaagaag
cactttgtcctttggtgcataaagaaagacttctcaaaacctcaggacggagacataata
gcacccgagctgacgcctctgaaagccagctgggcaaacaacaacgagggcgaggatggc
aaagctggcagctccaggagagtaaactgtgtaaatggacatgagaaagccaaagttcac
ctttcattccactaa
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