Epinephelus fuscoguttatus (brown-marbled grouper): 125892258
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Entry
125892258 CDS
T08419
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K10654
tripartite motif-containing protein 55
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125892258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125892258
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125892258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
125892258
NCBI-ProteinID:
XP_049438124
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Position
LG7:complement(42984281..43012322)
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AA seq
901 aa
AA seq
DB search
MTERNYPPTVINHQQMESKEELKFGGAAMSLPADLSGLQGGGGAEALATLEKQLICPICL
ELFNKPVVILPCQHNLCRKCANELYQPSLFQARTTMMVNSGRFRCPSCRHEVVLDRHGVY
GLQRNLLVENIIDVYKQEVSNNNNASSPLPLPPSPAQLTCSDHEGEKVNIYCLTCQVPTC
SLCKVFGAHQTCQVAPLTDVHQQKKDELSEGVSSLVAFNDKVQALIDGLEETCRTIEENC
KIQKQSVCETFDRVFSILEERQKAMAQRISSEEEEKTGHAQTLVRCYGESVEANNKLVER
ATSSMEEPDMAAFVQNSRELIKQVITATGSCPAATLKPGYESLSHYRFNFSRQERALRSI
DFPKVVEDVPEEPEVEQEPEEPKEPSVENIDPKHHQETSTQNLESVSEPVKEPIPVLVSS
PVELAAVTPAPGVVRDSVEPAGAVLLPETEDLDLDDRGSSVMKNKTEEEEEEEEVEEEEV
EEERCAAPVPVKEGNICEEQEGMSTQQCEAVGDAGDRTAQTETEDKQKAQDEEEMMKEEI
DAMFYPSWYKPSSWRRMSPDPADILTKVCDAEQTTCSQPAGESLSEAAVQTEAGGAVQVM
SEAQIQPEPAGSLEPNPSEPPPGPQELHTQTETQPLSDIPIELGSASTPAPQTQPVEEVG
VTEQENDEEEMQGWVCLPGAVDKSFSLVEGSFDLGDSLSDNNDSPSSVAPEEAEGESLEV
NKEKSESSDERVEDAEEKEVNLDLKCASELKDREGELEAEAIKGGLEEGSMKSDRKKKDA
SVREDGSEPKSDSLGVGSINSLTEGGGDTEFEAGSSEFAGKKEKNGENSEQPEDLMEMSF
AEAEENISSSVSLQTETETRSPAQTSPPLSSSIPSSTFTLSEAPRRPSFSFSWLNPLHKN
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagaaattatccaccgaccgtcatcaaccatcagcagatggagagtaaggag
gagctgaagtttggcggagcggccatgtctctgcctgcagacctgagcggcctgcagggc
ggcgggggagcagaggcgctggcgacgctggagaaacagctgatctgtcccatctgcctg
gagctcttcaacaagccggtggtcatcctgccctgccagcacaacctctgcaggaagtgt
gccaacgagctttatcagccgtccctgttccaggctcgcaccaccatgatggtaaacagc
ggccgcttccgctgtccgtcctgcagacatgaggtggtgctggatcgccacggtgtctac
ggcctgcaacggaacctgctggtggagaacatcatcgatgtctacaaacaggaagtcagc
aacaacaacaacgcctcaagccccctccctcttcctccttctcctgctcagctcacctgt
tcagaccacgagggggagaaggtgaacatctactgcctcacctgtcaggttcctacgtgt
tctctctgtaaagtgttcggagctcatcagacctgtcaggtggctcctctgacagacgtc
caccagcagaagaaggatgagctgagtgaaggcgtcagttctctggtggcgttcaacgac
aaagtccaggctctgatcgatggccttgaggagacgtgcagaaccatagaggagaactgc
aagattcagaaacaaagtgtgtgtgagacgtttgaccgagtgttttccatcctggaggag
agacagaaggcgatggcgcagcgaatcagctcagaggaggaagagaagacaggccacgcc
cagacgttagtgcgttgctatggagagagcgtggaggccaacaacaagctggtggagaga
gcaacgagcagcatggaggagccggacatggctgctttcgttcagaattcaagagagctg
atcaaacaggtgataacagcgaccggctcgtgtccagctgcgacactgaaaccaggttat
gagagtttgagccactacagatttaacttcagccgacaggagagagctctgaggagcatc
gacttccccaaagtcgtggaagacgttcctgaagaaccggaggtggaacaagagccagaa
gaacctaaagagccatcagtggagaacatagacccaaaacaccatcaggaaacctccacc
cagaaccttgaatctgtttcagaaccagtcaaagagccgatcccagtgctggtatcctca
ccagtggaactggctgcagtaacaccagctccaggtgtggtgagggactctgtggaacct
gcaggggcggttctcctgccagagactgaggacctggacttagatgacagaggatcaagt
gtgatgaagaacaaaacagaggaggaggaggaggaagaggaggtggaggaagaggaggtg
gaggaggagagatgtgcagctcctgttcctgttaaagagggaaacatctgtgaggagcag
gaggggatgagcacacagcagtgtgaggcagtaggtgatgcaggcgatcggacggcacag
actgagacagaggacaaacagaaagctcaggatgaagaagaaatgatgaaggaggagatt
gatgctatgttttaccccagctggtacaaacccagcagctggcgcaggatgagccccgac
cctgcagatatcctgacaaaggtgtgtgatgcagagcagacgacgtgttcacaaccagct
ggagagtcactctcagaggccgcggtccagactgaggccggaggcgcagtccaagtcatg
tctgaggcccagatacaaccagaacctgcggggagtctggagccaaaccccagcgaacct
ccacctggtcctcaagagcttcacacgcagacagaaacccaacctctgtctgatattccc
attgagctgggcagtgcttctactcctgctcctcaaacccagccagtggaagaagttgga
gtcacagagcaggaaaacgatgaagaggagatgcagggctgggtgtgtctgcccggagct
gtggataaaagcttcagcctggtggagggtagcttcgatcttggagacagtttgtctgat
aacaatgatagtccgtcatctgtagcaccagaggaggctgagggtgagagtttggaggtg
aacaaagagaagtctgagtccagtgatgaaagggtggaggacgcagaggagaaggaggtt
aacttagatctaaagtgtgcttcagagctgaaggacagagagggtgagttagaggctgag
gcgataaaaggagggctggaagaaggaagcatgaagtctgacaggaaaaaaaaagatgca
tctgtgagggaggatggctctgaaccaaaaagtgacagcttgggtgtggggagcattaac
agtttgacagaaggaggaggagacacagagtttgaggctggtagttcagagtttgcagga
aagaaagagaagaacggagagaacagcgagcagcctgaagacttaatggaaatgagtttt
gctgaagctgaagagaacataagctcctctgtgtctctccagacggagactgagacaagg
agtcctgcacagaccagtcctcccctctcctcctccatcccttcctccactttcaccctc
agcgaggctcctcgtcggcccagtttcagcttctcctggctgaaccccctccacaagaat
aagtag
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