Epinephelus fuscoguttatus (brown-marbled grouper): 125892264
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Entry
125892264 CDS
T08419
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03030
DNA replication
efo03410
Base excision repair
efo03420
Nucleotide excision repair
efo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125892264 (rfc2)
03410 Base excision repair
125892264 (rfc2)
03420 Nucleotide excision repair
125892264 (rfc2)
03430 Mismatch repair
125892264 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efo03032
]
125892264 (rfc2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125892264 (rfc2)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125892264 (rfc2)
DNA replication proteins [BR:
efo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125892264 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
125892264 (rfc2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125892264 (rfc2)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125892264 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
125892264 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
AAA_24
RuvB_N
MipZ
AAA_19
AAA_assoc_2
nSTAND3
DEAD
AAA_18
AAA_5
AAA_30
DNAX_ATPase_lid
ABC_tran
MeaB
AAA_28
AAA_25
NTPase_1
RNA_helicase
AAA_23
AAA_2
DUF815
PPR_1
AMP-binding_C_3
SLFN-g3_helicase
MCM
FtsK_SpoIIIE
bpMoxR
Motif
Other DBs
NCBI-GeneID:
125892264
NCBI-ProteinID:
XP_049438134
LinkDB
All DBs
Position
LG7:complement(44010051..44016424)
Genome browser
AA seq
414 aa
AA seq
DB search
MNFNCCGCKYREFSARCSQPISAVTNKRSANEPPVYCRVVVREGNVPLLFARSVRDIMEV
EMAEADSEQRPTESVQKADSGTGEASGKSSGSTYELPWVEKYRPLKLNEIVGNEETVSRL
EVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGAAMKDAVLELNASNERGIEVVRNKI
KMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEP
IQSRCAVLRYSKLTDGQILARLQDVVEKERLSVSDDGLEAVIFTAQGDMRQALNNLQSTN
SGFGYINSENVFKVCDEPHPLMVKSMLGHCVNGDIDEAYKVVEQLWALGYSPEDIIGNIF
RVCKTFQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaactgctgtggttgtaaatatcgcgagttttcagcccgttgttctcagcca
atcagcgccgtcaccaataaacgctcggccaatgagcctccagtttactgtcgcgtggtt
gtcagggagggaaacgttccgctgctgttcgcgcgcagtgtcagagacatcatggaggtg
gagatggcggaggctgacagtgagcagagaccgacagagagcgttcagaaggcggactca
ggaaccggagaggcctcgggtaaaagctccggcagcacctacgagctgccctgggtggag
aagtaccggccgctgaagctgaacgagatcgtggggaacgaggagacggtgagccggctg
gaggtgttcgccagggagggaaacgtccccaacatcatcatcgcaggtcctccaggcaca
ggaaagaccaccagcatcttgtgtttggcccgagctctgctgggagccgccatgaaagac
gccgtgctggagctcaacgcttcaaatgaaagaggcatcgaggtagtgaggaacaagatc
aagatgttcgctcagcagaaagtcacactgcccaaaggacgacacaagatcatcatcctg
gacgaagccgacagcatgacagacggagctcagcaggcattaaggaggatcatggagatc
tactcaaagacaacacgctttgctctcgcctgtaacgcctcagataagatcattgagccg
atccagtctcgctgcgccgtgctgcgctactccaaactgacggacggacagatcctggcc
cggctgcaggatgtggtggagaaggagcgtctgtccgtgtctgacgacgggctggaggcc
gtcatattcaccgcccagggagacatgagacaggcgttgaacaacctgcagtcgaccaac
tccggcttcggctacatcaacagtgagaacgtattcaaagtgtgcgacgagcctcacccg
ctgatggtgaaaagcatgctgggacactgtgtgaatggggacattgacgaggcctacaag
gtggtggagcagctgtgggcgctgggatactctccggaggacatcatcggaaacatcttc
agggtgtgtaagacgttccagatggccgagtacctcaaactggaattcatcaaggagatc
ggttacactcacatgagggtggctgaaggtgtgaactccctgctgcagatggccggtctg
ctgggtcgactctgcagcaagacagcgccccctgctgccagctga
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