Epinephelus fuscoguttatus (brown-marbled grouper): 125892381
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Entry
125892381 CDS
T08419
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125892381 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125892381 (taf4a)
03036 Chromosome and associated proteins [BR:
efo03036
]
125892381 (taf4a)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125892381 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
125892381 (taf4a)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125892381 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF5896
TMP_3
AAA_23
Motif
Other DBs
NCBI-GeneID:
125892381
NCBI-ProteinID:
XP_049438326
LinkDB
All DBs
Position
LG1:complement(30236275..30248561)
Genome browser
AA seq
888 aa
AA seq
DB search
MDASTASTDSTTGHDPSKTLVGSDGATSVPNHQGKVGSYSVQTFNGSQTMNSHNSGSAAP
LGGAAVTSGTGNSSSTAITVTAVNSGPVMSKGLASAIMHPSSNSVIQTPLMNSQSVVASA
PSVSQAAGPTVTLVRPPMQTAGSGATLNGNNNVSHAVVANTTGHTGIGIQTPLVNNSQPS
NSVSVSAGSHIIKAEPPTTIIQSAPQPAVTPGAVSAPRIPSTVAGGPGGIRALTPQMLAP
RLPQTSPGQPSIGLHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRAAAPT
SVPPGQAPGNTIISRQVAPSTIIRQGCPAPTSLTATTTLHRPPILQGSVGAAVPGITPRT
VSQTAGTTVASVTVSKETMENVKKCKNFLSTLIKLASTGKQSTETAASVRELVKDLLEGR
LEAEEFTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLSQTSSGPVPST
SPIPTTVVLGSPAPRLTAPVCRPQLQPGISKPGQTPSLVIQPQQQRAMLRPQVALPTTPM
VTLRNQAPGRIMLGQQQVQLKELQPVPVRPEVPVVSKQVSAAALTLAQKNKLKEAGGTFK
DDDDINDVASMAGVNLSEESANILATNSGLVGAVTHSCKDEAFLSCAVLQRRMQEIGETL
TTLLTIQHPSIHLPPKAPTFFFFFFFSGRRHGVTDLGAEVVNFVSHATQQRLQNLLEKVS
QVAQQRNTNFKHEDDNYEQSSDVRAQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQE
DPEQLRLKQKAKEMQQQELAQMRQREANLTALAAIGPRKKRKILDSPSSSAAAEGSGTGS
SLSGGAGSSGSRPTRQRITRVNLRDLLFCLENERSTSHSHFLYKGFLK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcgacggccagcacggactcaaccacgggacacgaccctagcaaaacactt
gttggtagtgatggtgcaacttctgtccccaatcaccaggggaaagtaggctcatactcg
gtgcagactttcaatgggagccaaactatgaactctcacaattcaggaagcgctgcccct
ctcgggggggcggcagtgacaagtggcactggtaacagcagcagcactgcgataactgtc
acagctgtcaacagtggaccagtgatgtctaaagggctggcgagtgcaataatgcacccc
tcgtctaacagtgtaattcagacgcctctcatgaactcacagagtgttgtcgcttcagct
ccgtcagtgagccaggcagcaggacccactgtgacactcgtcaggccgcctatgcaaacc
gcggggtcgggtgcaactttgaatgggaacaataatgtgagccatgcagtggttgccaat
acaacaggtcacacaggtatcggcatacaaaccccgcttgtaaacaacagccagccgtcc
aactcggtgtctgtcagcgcagggtcgcacataatcaaggcagagccacccacaacaata
atacagtcagcaccgcagccggctgtcactcctggcgccgtcagcgctccccggattccg
tcgacggtagctggcggtccaggcgggatccgagccctgacgcctcagatgctggcccca
aggctcccacagacctctccaggacagcccagtataggcctacataacatccagcttccc
cccgggatggtgcttgtgcgcagtgagagtggacagctgttgatgattcctcagcaggct
ctggcccagatgcaggcccaggcacagggaggcatggcgcctcgggctgctgcgccaaca
agcgtgcctcctggccaggctcctggaaacaccatcatcagcagacaagtggcgcccagc
accatcatccgtcaaggctgtccagctccaacatcactcacggcaaccaccactcttcac
agacctcccatccttcagggctcagttggggctgcagtaccaggaattacccccaggact
gtcagccaaacagctgggaccacggttgcctcagtaacagtgagcaaagagacgatggag
aatgtgaagaaatgtaagaacttcctgtccacattgatcaagctggcatccactgggaag
caatcaacagagactgcagccagtgtgagagagctggtcaaggacctgctggagggcaga
ctggaagctgaggaattcaccagcagattgtacaaagagctcaactcttcaccccaacct
taccttgtgcctttcctcaagagaagcctcccagccttgaggcagctcacaccagactca
gcagccttcatccagcagagtcagctctcccagacatcctcaggtccagtcccctccacc
tcacccatccccaccacagtggtcctaggcagcccagcgccccgcctcactgccccagtc
tgcaggccccagctccagccaggcattagcaaaccaggacagaccccttcactggttatc
cagcctcagcagcagagagcgatgctgagacctcaggtagccttaccgacgacccccatg
gtgactctcaggaatcaggcccctggtcgcatcatgctgggacagcagcaggtccagctg
aaagagctgcaaccagttcctgtgaggccggaggtgccagtggtttctaaacaagtctct
gctgcagccctgactctggctcagaagaacaagctgaaagaggctggtggtactttcaaa
gatgatgacgacatcaacgatgtggcctccatggctggagtgaacctatcagaggaaagc
gctaatatcctagcaaccaactctggactagtgggagcggtgacacattcctgcaaggac
gaggcttttctctcctgtgctgttctacagaggagaatgcaggagataggtgagacactt
acaacgttgctgacaatacagcatccatccatccatctgccccctaaagccccaacattc
ttttttttcttctttttttcaggtaggaggcacggtgtgacagacctgggtgcggaggtg
gtgaactttgtctcccacgctactcagcagcggctccagaacctgctggagaaggtttcc
caagtggcccagcagagaaacaccaatttcaagcacgaggatgacaattatgagcagagc
agtgatgttcgtgctcagctcaaattctttgagcagctggaccagctagagaaacaacgg
aaggaggaacaggagagagaaatcctcctaaaggcagctaagtctcgagcccggcaagag
gacccagagcagttgcgcctgaaacagaaggcaaaagagatgcagcagcaggagctggct
cagatgagacagagggaggccaacctgacggctctggcagccatcggccccaggaagaag
aggaagattctggactctccatcctcctctgctgcagctgagggatcaggaacaggttcc
tctctgtctggtggggctggctcatcgggctccagaccgacacggcagcgcatcacacgt
gttaatctcagggacctgctcttctgtttggagaacgagagatctaccagtcactcccat
ttcctctacaagggctttctcaaatag
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