Epinephelus fuscoguttatus (brown-marbled grouper): 125892538
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Entry
125892538 CDS
T08419
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125892538 (chd5)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125892538 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125892538
NCBI-ProteinID:
XP_049438478
LinkDB
All DBs
Position
LG1:11164023..11230253
Genome browser
AA seq
2005 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPLTPLDIFSDNDSLKQQKKKKPKKMKE
GKMPKVKKRKKEGGIQPRVDSDLEETSEVEEERERPEIGSESESSAYGPTKKKKKKPKEK
KEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSSSQPSSQLGPIKKAKTKEGKGQGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEDEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWTWGEPPLPAELPAGPDGKPNDPLTKPPLKGHPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYGI
KPEWMVIHRIVSHSFDKDGDVHYMIKWRDLPYDQCTWEVDDFDVPEYDGHKSSYWDHREQ
ILGEDQRPLVVRKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKTGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKEGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPIPPEKTESLLGTAEDKET
TEQDSKRSSEQESSSAEPASVPEKASDGEESKASSEEKTGDERDATESPSAKSEPSANSK
ESALKQTELPSSQPSPKMEPCKETEKGDSDSPQAKTEDKENKPAVADDMKSEDALEGRLN
GDKDTLDEMDESRKEDKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFSQG
GFGCSQMYSSSFGGGFRGPGGQPMVNYSQMPLGPYVSDLHPYSVSSNGPPPPSSHLDKKS
LDSLRDVATPDLKSGKPSDVICIED
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgatgaaggtgagcgcaacaccgttcccctcacacccctcgacatc
ttctctgacaatgactccctcaaacaacaaaagaagaagaagcccaaaaagatgaaagag
gggaaaatgcccaaagttaagaagaggaaaaaggagggaggaatccagccaagggttgac
agcgacctggaggagacctcagaggtggaggaggaacgggaacggccagaaataggctca
gagagtgagagcagcgcgtacggcccaaccaaaaagaagaagaagaaaccgaaagagaag
aaagagaagaagcccaggaagaagaagagagatgaggaagatgatgatgatgacgatgat
gatgggaacatgaaagaacctaaatcatccagccagttgatgcaggagtggggtctggaa
gacgttcagtacggcttcacggaggacgactacaaaaccatcacgaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgagagttcagtgccaacaacccgttcaaaggcgca
tctgccaccgctgtggctgctgctgtggctgccgccgtggaaacggttaccgtggcacag
ccgacatctgtcagcagcagccagccgagctctcagctggggccaatcaaaaaagccaaa
accaaagagggaaaggggcaaggagttaggaagagaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaagaaa
gcatcctcgagcgaggaggacttcctggaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaagatggtgatggttatgagacggaccaccaggactactgt
gaggtttgccagcagggcggagagatcatcctgtgtgacacctgtcccagagcgtaccac
ctggtctgtctggaccctgagctggagaaggcccccgagggcaaatggagctgtccacac
tgtgagaaagagggcatccagtgggaggccaaagacgaggaggaagacgaggaggagcca
gcaggcgaggaagaggacgaccacatggagttttgccgagtgtgtaaagatggaggggag
ttgctgtgttgcgacacctgcccatcttcctaccacatccactgcctcaacccacctctc
cccgagatacccaacggggagtggttgtgtccacgctgcatgtgccctcccctcaaaggt
aaggtccaaaagattctccactggacatggggagagcccccgttgccagctgagctgcct
gcgggccctgacggcaagccaaacgatccactgaccaagcctccgctcaagggccaccca
gagagggagttcttcgtaaagtgggctggcctttcgtactggcactgctcctgggtcagc
gagctgcagttggagctttatcacacggtcatgtatcgcaactaccagcgcaagaacgac
atggacgaaccgccgccgtacgactatggctccggagaggaggagctcaacagcgagaag
aggaagagcaaagacccccagtacgctgtgatggaggagcgcttctaccgctacggcatc
aaaccagagtggatggttatccaccggatagtcagccacagtttcgataaggacggcgat
gtgcattacatgatcaagtggagagacctgccctacgaccagtgcacctgggaggtggat
gacttcgatgtcccagaatatgacggtcataaatcgtcttactgggaccacagggagcaa
atactaggggaggaccaacgccccctggtggtgaggaaaggaaagaaactcaaagacgac
catccaaagagggaggtccctcctgatgctcctatcatagatccaaccatcaagtttgag
caccagccgtggtacattaacgccactgggggaacactgcacccgtatcagctggaaggc
ctgaactggttgaggttctcatgggcgcagggcacagacacaatcctggccgatgagatg
ggccttggaaagacggtgcagacaatagtgtttctgtactcactctacaaggagggtcac
tccaaggggccgttcttggtgagtgcgcccctctccactatcatcaactgggagagggaa
ttcgagatgtgggctccagatttctacgtggtgacgtacactggagacaaagacagtcgg
gcaatcatcagagagaacgagttcacctttgaagacagtgcggtgaaaacgggacgcaag
gtgtttcggatgaagaaagacactccaatcaagtttcatgtgctgctgacctcttacgag
ctgatcactatagatcaagccattctgggctccatcacctgggcctgcctggtggtggac
gaggcccacagactgaaaaacaaccaatcaaagtttttcagaattctcaacgggtataag
atctactacaagctgctgctcactgggactcctcttcagaacaacctggaagagctgttc
cacttgcttaacttcctcaccccagagcgcttcaataaccttgaaggcttcctggaggag
tttgctgatatctccaaggaggaccagatcaagaagctgcacgacctgcttggccctcat
atgctcagaaggctcaaagccgatgtcttcaagaacatgcctgcaaagacagagttgatt
gtcagagtggagctcagccccatgcagaagaaatattacaagtttattttgacgcggaat
tttgaggctctgaactcaaaagggggagggaaccaagtgtccctgctcaacattatgatg
gacctgaagaagtgctgcaaccatccctacctgttccccgtggctgctgtggaagctcct
gtgctacccaacggctcgtacgatggcaacctactggtgaagtcctcaggaaaactgacg
ctgcttcagaaaatgctgaagaaactcaaagatgagggacacagagttctcattttctct
cagatgacaaaaatgttggatctacttgaggattttctggagttcgagggttataaatat
gaacgtattgatggaggaattactggaggcctcaggcaggaggccattgaccgcttcaat
gcaccgggcgctcagcagttctgcttcttgctttcaacgcgagccggaggtctcggcatc
aacctggcgagcgcagacactgtcatcatctacgactctgactggaatcctcacaatgac
atccaagcttttagtagagcccatcgtataggtcaaaacaggaaggtgatgatctatcga
tttgtgacgcggggctcagtggaggagcgaatcactcaggtggcgaagaggaagatgatg
ctgacccatctggtggtgcggcccggcctgggctccaaaactggctccatgtccaaacaa
gaactggacgatattctcaagtttggcactgaggagcttttcaaagatgagatggaggca
gcacgaaccatgggtgacaacaaagagggcgaggagggcaacgtgattcactatgacgat
gacgccatctcgaagctgctggaccgcagccaggacgccactgaagacacggagatccag
aacatgaacgagtacctgagctccttcaaggtggctcaatatgtggtgaaagaagaggat
ggagaggaggaggtggagcgggagatcatcaagcaggaggagaacgtggatccagactac
tgggagaagctgctccgccaccactacgagcagcagcaggaagatctggcccgcaacctt
ggcaaaggcaaacgcatccgaaagcaggtcaactacaacgatacgacccaggaggaccaa
gagtggcaggatgatctttcagacaatcagtcggagtactctgtggggtccgaggacgag
gacgaagatttcgaggagaggcctgaaggcggacgcagacagtctcgccggcagctgaag
aatgagaaagacaaacctttgccacccttactggcacgagttgggggcagtattgaggtc
ctggggttcaacgctcgccagaggaaagccttcctcaatgccatcatgcgctggggcatg
cctcctcaggatgccttcaactcccactggctggttcgagacctgagagggaagagtgag
cgcgagttcagggcctatgtgtctctgttcatgagacatctgtgtgagccgggggcagac
ggagcagagacctttgctgacggagtcccacgtgaaggactgtctcgtcagcatgttcta
accaggatcggcgtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgtaaat
ggaaagctgagctctccagatctgattcccatcggcatggagctgaagaaactgactgag
agtttatcttctgatcccaacacccctgtgccagccagccctgtcgctacgcagcccggc
actcccatcccaccagagaagactgagtctctcttgggcaccgctgaagacaaggagacc
acagagcaagatagcaagagatcgtcagagcaggaatcttccagtgcagagccagcatct
gtacctgagaaagcatctgacggcgaggagagcaaggccagctcagaggagaaaacagga
gatgagagggacgcaactgagtccccctctgcaaagtcagagccatctgccaactccaaa
gagtccgctttgaaacagacagagctaccatccagtcaaccctcacctaaaatggagccc
tgcaaagaaacagaaaaaggagatagtgattctcctcaggcaaaaactgaagacaaggaa
aataagccagccgttgcagatgatatgaagagtgaggatgcgttagagggtcgattaaat
ggagacaaagacactttggacgagatggatgagagcaggaaggaggacaagaacggatac
aaagccaagtttatgttcaatatcgctgatggaggtttcacagagttgcacaccctctgg
caaaccgaagaacgagcggcgctgtcttctggaaagatgcatgacatctggcaccgtcgc
catgactactggcttttggctggcatcgtaacacatggctatgctcgttggcaggacatt
cagaatgacccacgttacgccattctgaatgagcccttcaagactgagatgcataagggc
aactacctggagatgaagaacaagttcctggctcgccgctttaagttgttggagcaggcc
ctggtgattgaggagcagttgaggcgggcagcttacctgaatatgacccaggaccccagc
cacccggccatggctctcaacactcgcttcgccgaggtggaatgtctggcagagtcccac
cagcacctgtccaaagagtctctggccgggaacaagcctgccaacgccgtgctccacaaa
gtgctgaaccagctggaggagcttctgagcgacatgaaagctgatgtgacccgactgccc
aacatgctgtccaggatcccgccggtgtcggcccgtctgcagatgtctgagaggagcatc
ctgagccgcctcaccagccgagggagcgagcctccacctcagcagccttttagccagggt
gggttcggctgctcccagatgtacagcagcagcttcggtggagggttcagaggaccgggt
ggacagcctatggtcaactacagtcagatgcctctgggaccctacgtcagcgacctacat
ccttattcagtgtcctctaacggccctccacccccttcaagccatctggacaagaagtca
ctcgactccttgagagacgtagcgacccctgacctcaagtcaggcaaacctagtgatgtc
atctgtatcgaggactag
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integrated database retrieval system
