Epinephelus fuscoguttatus (brown-marbled grouper): 125892601
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Entry
125892601 CDS
T08419
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125892601 (prdm1a)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125892601 (prdm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
125892601
NCBI-ProteinID:
XP_049438581
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Position
LG8:1521907..1539412
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AA seq
844 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDTHHGAKMASTATNSTDSNRAETTADTDVDM
ETETEMEEADMSRWTEAEFEEKCTYIVKDTAWEAGPDSDAVTTTRAEASLPRNLAFKHPA
DSKEVVGVCSREYIPKGTRFGPLVGEIYTADSVRRDANRKYFWRIYEGQEFHHFVDGLDE
TRSNWMRYVNPAHSVAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPS
GELMMQKLKQSLLEVKQQQVSSEERLVEASSPSPVAVTPTPPKREHSVLSILRGTNSTSS
SSSTKREPSRPLPTRPRCADSPERPLYPRALYPTLRPHPHIPEDFLGHKPGQLVYPTTCS
PGNQSSATPSPSARSSPDSSPQGSPLGPASFYPTGLGSYPGYSPPSTPISSSFYPPGAPY
SRYLLPHPYSLPSGGVPTVGGIFPRMYPVYSSLLPPHVPLLPSDTAGRRFLMPDHIQPSS
VSAHRDFLLPRPTSAFSAATSLKDKAGPHHPYPAHPHPHRPTHAPSSGSPTAGTAPPNER
VPTKPTSALLGNAGEHCTDEEAINLTKAKRGPGSAGYKALPYPLKKQNGKIKYECNVCSK
TFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCHKRFSS
TSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSL
RLHLKGYCPAVSTHSSLEDVHRANEEIERFDVSEHAERLEQLQGGVEVEAMLEKQVLGML
WRENDLKSPHYHPHHKGGATDLISAGYGTYESPNETSVIKMRHSSPIPPLPANVTVKQES
EDHA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcataccatggagcaggacgacacacatcacggagccaagatggcctccact
gccaccaacagcaccgactcaaacagagcagagacgacggcagacacggacgtggacatg
gagacagagacggagatggaggaggcagacatgagccggtggacggaggcagagttcgag
gagaagtgcacgtacatcgtcaaagacacggcgtgggaggcggggccagacagtgacgct
gtgacgacaaccagagctgaggcgtcgctgcctcggaacctggcgttcaaacacccagct
gacagcaaggaggtggtcggcgtgtgcagcagggagtacatccccaaaggaactcgcttt
ggtcccctggtgggcgagatctacacggctgacagcgttcgcagagacgccaaccgcaag
tacttctggaggatctacgagggccaagagttccaccacttcgtcgacggcctggatgag
actcgctctaactggatgcgctacgtgaacccggcgcactcggtggcagagcagaacttg
gcagcatgtcagaacggcatggagatctacttctacacggtgaagcccgtcccagccggt
gctgagctgctcgtctggtactgccacgacttcgcccgtcgtctccactacccgccgtcc
ggagagctgatgatgcagaaactcaagcagtctctcttggaggtgaaacagcagcaggtg
agcagtgaggagcgtttggttgaagcctccagcccgtcccccgtcgcagtgacccccacg
ccgcccaagagggaacacagcgtcctctccatcctgcgtggcaccaacagcacctcctcc
tcctcctcaacgaagagggagcccagccggccgcttcccacccggccgcgctgtgccgac
agtcctgagcgccctctgtaccctcgcgccctctacccgacgctcagaccccaccctcac
atccctgaagacttccttggccacaaacccggccagcttgtttaccccacaacttgttcc
cctggcaaccagtcttcagccacacccagcccgtcagcgaggagcagccctgacagcagc
cctcaggggagcccactgggtccagcatctttttaccccactggactgggttcttacccc
ggttactccccgccatctactcccatctcctcatccttctaccctccaggagctccttac
tcacgctacctccttccccatccctactctctgcctagcggtggtgtcccaactgtagga
ggaatctttcccaggatgtaccccgtctacagcagcctgctcccccctcacgtgcccctc
ctgccctccgacacagcagggaggcgcttcctgatgccagaccacatccaaccctcctcc
gtctctgcccacagagacttcctcctccccaggcccaccagtgccttctcagctgccacg
tctctgaaggacaaagcagggcctcaccacccttaccccgcgcaccctcacccacacaga
cccacccacgccccctccagcggctccccaacagcaggcacagcacctcccaacgagagg
gtgcccaccaagcctacctcagccctgctgggcaatgccggcgagcattgcacagatgag
gaggcaatcaacctgaccaaggcgaagcgtggcccgggctcagcaggctacaaggcgctg
ccgtacccgctgaagaagcagaacggcaaaatcaagtatgagtgcaacgtgtgcagcaag
accttcggacagctgtcgaacctgaaggttcatcttcgtgtccacagtggagagagaccc
tttaaatgtcagacctgtaacaaaggtttcactcagctggctcacctgcagaaacacttc
ctggtccacactggggagaagccacatgagtgccaggtttgtcacaagcgcttcagcagc
accagcaacctgaaaactcacctgcgcctccactcaggggaaaagccctaccactgcaaa
ctctgcccagcaaagttcacccagtttgtccacctcaagctgcacaagcggctgcactcc
cgcgagcgtccgcacaaatgcccccactgccaccgccactacatccacctgtgcagcctg
cggcttcacctcaagggctactgccctgctgtctccactcactcttccttggaagacgtg
caccgcgccaacgaggagattgagcgctttgacgtcagcgagcacgccgagcggctggag
cagctgcagggaggggtggaggtggaggctatgctggagaagcaggtcttggggatgctg
tggagggagaacgacctgaagtccccccattaccatccccaccacaagggcggcgccacc
gaccttatctctgcaggttacggcacatatgagtccccgaatgagacatcagtcatcaag
atgcggcacagcagccccatcccgccacttcctgccaacgtcaccgtcaagcaggagtca
gaggatcacgcgtga
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