Epinephelus fuscoguttatus (brown-marbled grouper): 125892832
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Entry
125892832 CDS
T08419
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125892832 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efo03009
]
125892832 (pop1)
03016 Transfer RNA biogenesis [BR:
efo03016
]
125892832 (pop1)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125892832 (pop1)
Enzymes [BR:
efo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125892832 (pop1)
Ribosome biogenesis [BR:
efo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125892832 (pop1)
Transfer RNA biogenesis [BR:
efo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125892832 (pop1)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125892832 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
125892832
NCBI-ProteinID:
XP_049439064
LinkDB
All DBs
Position
LG8:36056635..36066861
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AA seq
1004 aa
AA seq
DB search
MLVFSVSVFRLAVSNWHLKYVFILQKMSAAKVKMRDKKLRNQPASVQYPSSHSSTHNGGD
TSVTGGGGDNDPTTEKSRNPQKRSGWVRGHQKDDGGYAKDMPKYISGGSFARARAAEVCA
MLKAVTKTTGSCHVFGALPKHMRRRAMGHNTKRLPHRLRDVANRMREKSLQAGSKKKEQA
KSKSRKARRRHGNLLLEFIRRQRKNVWLETHIWHAKRFHMVKKWGYCLGDRPTYKCYRPC
YRAMSSHCLLQDLSYYCCIELQGEEDKLLAALSQLTSKEAGPTFAAALCLSGRKQGSVVV
YRAGQYPSKPLGPVTFLWRPRSQGSTHRQLWIWAHPTIKQDLLPELQTVCQCDEAVVPPV
IPVATPAEVVPTLETEPKPEKSPEAKQITGTKRKRSCEDAGAPPAKKILGDGTRSPTTPV
TWKSSSNGIVMNDLTMEIVRYRLIGPQSHSVLAETLEAATDCDEMSKSQPSSLWWPEHCK
DQSKMNLHQQQADVFHILKGMYSTGELPAGTVLGLTVDDPRLTLPTKKVKALPCVKQEQE
VDEEKRRELMLRGVPEPCCQSYLWEQSVRDNVTDNKISEQELNRMKSEVLVPGSRLSPTP
LQGRVPILLVHQPGKQVGHEMSSWGAGWDLLLPKGWGMAFWIPLVYRGVRIGGLNMSLKH
SQNKGAPHFPHDYPDCPAGIRFQEEQEAELLDKFKRRPPAKRTSYIKHGCLAPFRCPWQQ
LAEEWELILREGREERKGDCQTQTTTQADTVMEEEMTSHGDITVTKPPSHITVLRNRKSL
RLLSGWCRPTTSKGQRPCRVGEVPPLDRSAMKQFFTAHEMSLVWVRLSLLSKGNPQLHAI
VCVPTAEDLKLLYNKPVDSGPQEPPHKDHFKTRIRRRKKGPKKIATLSSDKTEGKESDLP
SASEPNPTTPEGPKSSSQPSSDLILGLWPDPLPSVISHCTRVTLGWVTQGDFSLSAGCGE
ALGFVSVAGLLNTLFNQPMEHRGMLLLRNPTSLHYRFAKINIEV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgttttcagtgtcagtttttcgtttagcagttagcaactggcatctaaaatat
gtctttattctacagaaaatgtctgctgctaaagtgaagatgagggacaagaagctgaga
aaccagcccgcaagtgttcagtacccatcttctcacagcagcacacataatggaggggac
acatcggtcaccggtggaggtggcgataatgatccaactacagaaaagtcaaggaaccct
cagaaacggagtggatgggtccgtggacatcagaaagatgatggaggttacgccaaggac
atgcccaagtacatcagtggtggaagttttgccagggccagggcggcagaggtgtgtgcc
atgttgaaagctgtcaccaagacaacaggcagctgccatgtgttcggagccctgcccaaa
cacatgagaagacgggccatgggccacaacaccaagcggctccctcacagactgagggat
gtggccaacagaatgcgagagaagagcctccaggctggctcgaagaagaaggaacaggca
aagagcaagagccgcaaggcccgccgccggcacggaaatctgctgcttgagttcatccgc
cgccagaggaagaacgtgtggctggaaacacacatttggcacgccaagcgcttccacatg
gttaaaaagtggggctactgcctcggggacagacctacatacaaatgctatcggccttgc
tacagggcaatgagcagccactgcctacttcaggacctttcttattactgctgcatagag
ctacagggagaggaagacaagctgctggctgctctgtcacagctgacaagcaaggaggcc
ggtcctacatttgctgcagcactgtgtctgtcagggcgaaaacagggcagtgtggtggtg
tacagagcaggacagtacccctcaaagcccctgggccctgtcaccttcctctggagaccc
cgttcacagggctcaacccacaggcagctgtggatttgggctcatcccactattaaacaa
gaccttcttcctgagttacagactgtgtgccagtgtgatgaggcggttgttcctccagtt
attccagtagcgacaccggctgaggttgttcccaccctagaaacagagccaaagcccgag
aagagccctgaggccaagcagataactggaaccaagagaaaacgaagctgtgaggatgcc
ggtgcacctcctgctaagaagatactgggagatggaaccagatctcccacaactccagtt
acctggaagtccagctcaaatggaatagttatgaatgacctcacaatggagattgtacgc
tatcgcctgattggaccacagtcccattctgttctggcagaaactctggaagctgctaca
gattgtgatgaaatgagtaagtcccagccctcctccctctggtggcctgagcactgcaaa
gaccagagcaagatgaatctgcatcaacaacaagctgatgtctttcacatactgaaaggc
atgtattcgactggagagctccctgcaggcacagtgctgggtttgactgtagatgacccc
aggctgactttaccaacaaagaaggttaaagctttgccctgtgtaaagcaggaacaagag
gtggacgaggagaagagaagggagctgatgttgcgaggagtcccagaaccctgctgtcag
agttacctgtgggagcagtctgtccgggataacgtcactgataacaagatatcggagcag
gagttgaaccgtatgaaaagcgaggtgctggtgccggggtccaggctgagccccacaccc
ctgcagggccgggtccccatcctgctggttcatcaacctggtaagcaggtgggacatgag
atgagctcctggggtgctggatgggacctgctgcttcctaaagggtggggcatggccttc
tggatcccactggtgtacagaggagttcgcatcggagggctgaacatgagtctgaaacac
tctcagaataaaggagccccccacttcccccacgattacccagactgccctgcaggcatt
cgttttcaggaggagcaggaggcagagctcctggacaagttcaaaaggcgtccgcccgcc
aaaagaaccagttacattaaacatggctgtctggctccgttccgttgcccgtggcaacag
ctggccgaggagtgggagcttatcttgagggaaggaagagaggagaggaaaggagactgc
cagacccaaactacaacacaggctgacacagtgatggaggaggagatgacatcacatgga
gatatcactgtcacgaagcctccgagccacataactgtactgaggaacagaaagtcactg
aggctgctctcaggttggtgcagacccacgacatctaaaggtcaaaggccatgccgtgtt
ggagaggtgccacctctggaccgctcggctatgaaacagtttttcacagcgcacgaaatg
agcctggtgtgggtgcgtctgtcactactgtccaaaggcaatccacagcttcacgccatt
gtgtgtgtgccaactgcagaggacctgaagctgctgtacaacaagcctgtggacagtggc
ccccaggagcccccacacaaagaccactttaaaaccagaattagacgtcggaagaaggga
cccaagaaaattgcaacattgtcctctgataagactgagggcaaagagtcagaccttccc
tctgcctctgaaccaaaccccaccacacctgaaggccccaaatcatcctcccagccttcc
tctgacctcatcctggggctgtggccggatcctctgccaagtgtcatctctcactgcacc
cgagtgactctaggctgggtcactcagggcgacttctccctgtctgcaggctgtggggag
gccctggggtttgtcagtgttgccggtctccttaacaccctctttaaccagccgatggaa
cacagaggaatgttgctgctgcgtaaccccacatctctacactaccgctttgctaaaatc
aacatagaggtctga
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