Epinephelus fuscoguttatus (brown-marbled grouper): 125892976
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Entry
125892976 CDS
T08419
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125892976 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125892976 (arid1aa)
03021 Transcription machinery [BR:
efo03021
]
125892976 (arid1aa)
03036 Chromosome and associated proteins [BR:
efo03036
]
125892976 (arid1aa)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Helix-turn-helix
ARID
125892976 (arid1aa)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125892976 (arid1aa)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125892976 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
125892976
NCBI-ProteinID:
XP_049439318
LinkDB
All DBs
Position
LG8:complement(25885805..25903259)
Genome browser
AA seq
2316 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPKEESVPGEKQSDKKQPGLDSGSPGRGDLQDGADG
GNAGGGGEPEMKNGNGNPPRANNNNQNDSVGPEGNNHPGMVHHHGTAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQPNSHEHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSTQAPTAGGQPANVKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKL
LTSPSSTRGYPNYPSNDYSSQEGASKGPADMGSSGLYGGSNPGWQQRSHHPSPMSPGSAG
QPLVRNQPPGPMDPMGKMRGQPYGAGSPYSQQSQQGPPTGPQQGPGYPGQGYGPPGPQRF
SVGMQGRTPGGMGSMPYGPQMGSYGQQGPGGYGSQGQAPYYGQPGQAPHPSQQQTPYPQP
PPGQPGGQTPYPGQSHPPPSSAPHTQGGQPYQQPHMPPQSQGPLPGPSQGPPQSQPPYSQ
TSAPQSGQSLYAQQQGPPSQAQQQPSSQEPPGSQGQSSYPGSTPGPQQPPSQQQQAQSQP
PQQPPGHSQHPQGQPAAYPQNPQQQQQQQQQQQQAQQSPYQRFPPPQQQEVSQDSFQSNA
PPSSQPKSGPEDSQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNQAQS
PFSPHTSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPSSVQSDGSLHP
AMSQSPMAQDRGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGYGQQ
GGQYGPQGYPRQPGYGNMPNANYTGPGMGPMNSMAGQGGGPPYAGMPPGRMPHNQMGARP
YGPSMGPNMGPNMGPNMPPNMGNMPPQVGSGMCPPPGMNRKPQDPAAMQHPATNSMHNRM
PGYPNMSPGMMGSGPPYGPPMNNMPGMMNTQGGSPYPMGPNMANNSSGMASSPEVNNKMN
NKVDGSVTPKPEPKAKKPNSSTTTNEKITRLYELGPEPDRKMWVDRFLAFMEEKAMGMTN
LPAVGRKPLDLFRLYMSVKEIGGMTQVSKNKKWRDLATSLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMA
EGGDLKPPTPASTPHTQMPPMPPGSRSSVNLQDPFSEGSDPAFPRKNMTPNSAYQSGMNT
PDMQGRMGTYEPNKDPFGNMRKVGEQFLPANQGPNSGVGDQQQQQPPQQQPQQQQPPFNR
GPPGAMGTMPMGPRQQYPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMMPANADTGMYSPN
RFPPQQPRHDSYGNQYPGQGTPPTGSYPNQQPGMYPQQQQSYKRPVEGGYPPSKRHEAEY
SGPFHGGQQPPQQQQQGGASAPSSGQQESYNQYSGSGPYPGSDRRPPGPGNQFPFPFGRE
RMQGATGPNAQPNMPPQMMQSGPEGPQGGMWQGPRDMNYQNYPSRQGGPGGPPQGPGYPG
MNRSEEMMSSEQRMNHDGQWGGQMGPRQPPYGPAGPGQPMPRSVQSNYPQPPQGVQNHIP
QVSSPASMPRPMDSRTSPSKSPYMHGVMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPP
GSIEASHPVLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIST
FDLNTLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPDALKGDWDSTEEEEPR
AEDMEQEEGEDDEEEEEEEAETEGPARVKEEEEEQQQCSESRGRDEKTEDEERKSKGPSS
EQTAPSQSLAAHERPKQASKFDKFPLKVVRKKEPFTAGQTNNHGKVQEFDSGLIHWSAGG
GDSTEHIQTHFEPRKDFLEPRERISVPSSLLKRRVPEDVLLENCLPIEEEKRKNQDEEER
PKDTSSSEKAEVSEKASPLLSSEEERKTDSETKTVEKVGKSHQENNRPIPPSDSVLTQQP
QQTATILEDEPHSKDEGPLIALANWQDSLARRCICISNIVRSLSFVPGNDHEMSKHPGLL
LLLGRLILLHHRHPERKQAPLTYEKDEDSDEGMGQRDEWWWDCLELLRENTLVTLANISG
QLDLSIYPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQD
NNVDLILATPPFSRLEKLYGNLVRLIGDRKVAVCREMAVVLLANLAQGDTVAARAIAVQK
GSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMHFEPTSPDMMRRAARALHALAKVEENHS
EFTLHESRLLDLSVSPLMNSLVSHVICDVLFLIGQS
NT seq
6951 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagcccgccttccgaactcaaa
aagccggatcgagaccccaaagaggagtcggtaccgggggagaagcagtcagacaaaaag
cagccgggcttggacagcggatcgccgggccggggggatctgcaggacggggccgacggt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataataaccagaatgactctgtcggaccggagggaaataaccaccccggcatg
gtgcatcaccacggcaccgcgtttcccccaccttcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtgcagtcgagcaacatgatggacccgtatcaacctaattcacacgagcatggc
ttttccaaccaccagtttaacaattacaacccattcccgaacaggactccatatcccggc
caagcatacgccatgaactcccctcgcagtacccaggcgccgacagctggggggcagcca
gctaacgttaagcagcagccaccagcgggaggacccacggcgatggctggatcttacagt
aaccagagatataacattggaaacccgcaacctacatccacaccgacactcaacaagctc
ctaacctcccccagctccacgcggggatatccaaactacccgtctaatgactacagtagc
caagaaggagctagtaagggaccagcagacatgggcagtagcggtctgtatggagggagc
aatccgggttggcaacaaagaagccatcacccgtcgcctatgagcccgggaagtgccggg
cagccgctagttagaaaccagccacctggtcctatggacccaatgggaaaaatgagaggt
caaccatatggagcaggcagtccatacagtcagcagtcacagcaggggcctcccacaggt
ccacaacaggggcctggttatcctggccagggttatggccctccgggtcctcagcgattc
tcagtgggaatgcaaggacgaacccctggaggcatgggtagcatgccgtatggtccacag
atgggatcttatggacagcagggaccaggaggctatggctctcagggccaggcaccatat
tacggccagcccggccaggctcctcacccaagccagcagcaaaccccttacccccagccc
ccaccaggacaaccgggtggccagacaccttacccaggacagtcccaccctccaccatct
tctgctccacacacccagggaggacaaccctatcagcagccccacatgcccccacagtcc
caggggccactgccaggcccatcccaagggcccccacagtctcagcccccgtattcccaa
acctcagccccacagtctggccagtctctctacgctcagcagcagggtcctcccagccag
gcccagcagcagccaagttcccaggaaccccccggatcacagggacagtccagctaccca
ggatccacaccagggcctcagcagcccccctctcaacaacagcaggcacagtcccagcct
ccacagcagccaccgggacacagccaacacccacagggccagcctgcagcgtacccgcag
aaccctcagcagcagcagcagcagcagcagcagcagcagcaagcacaacagtcaccttat
cagcgctttcctcctccacaacagcaggaggtatcccaggactcatttcagtccaatgcc
cctccatccagtcagcctaaatctggcccagaggacagtcaaggccgcccctccagcctt
ccggacctgtcagggtccatcgatgacctgcctacaggtacagagggtgccctgagtccc
ggcgtgagcacgtcaggtgtgtcgagcagccagggtgagcagagtaaccaggctcaatca
cccttttctcctcacacgtctccccacctgccaggcatccgtgggccttcaccctcgcca
gctggctcccctgccagcgccagcacaccccgcacaggaccgctgtcacccgccaacatg
ccagggacccagatgcctcccagaccatcaagtgtgcagtcagatgggagtctacaccct
gcaatgagccagtctccaatggcccaggacagagggtttatgcagagaaaccctcagatg
cccccctatggctcccctcagtcagcctctgcactgtcgccgcgccagtcctcaggggga
cagatgcaccccgggatgggcccatatcagcagaacaactccatgggctatggacagcag
ggaggacaatatggcccccaaggttatcctcgacaacccggctatggcaacatgcccaac
gcaaactacaccgggccgggcatgggcccaatgaactccatggcagggcagggtgggggg
ccgccatatgctggcatgcccccaggaaggatgcctcataatcaaatgggtgcacgcccc
tatggccccagtatgggtccaaatatgggccccaacatgggtccaaacatgccgcctaac
atgggcaacatgccaccccaggtaggctcaggaatgtgtcctcctccaggcatgaacaga
aagccccaggaccctgcagccatgcagcaccccgccaccaactcaatgcacaacaggatg
cctggttaccccaacatgtctccaggcatgatgggctctggcccaccctatggccctccc
atgaacaacatgcctggaatgatgaacactcaaggtggatcaccttatcctatggggcca
aacatggccaataactcaagtggtatggcctccagtccagaggtgaacaataagatgaat
aacaaagtagatgggagtgtaacacccaagccagagcccaaagctaagaagcccaactcc
tccaccacaaccaatgagaagataacacgtctgtatgagttgggaccagagccggacagg
aagatgtgggtggaccgttttttggccttcatggaggagaaagccatgggcatgaccaac
ctgcctgctgtgggacgcaaacccctcgacctcttccggctgtatatgtcagtcaaagag
atcggaggcatgacacaagtgagtaagaataagaaatggcgtgatctggccacttccctg
aatgtgggtacatccagcagtgctgccagctcgctgaagaaacagtacatccagtgtctg
tatgccttcgagtgcaaaattgagcgtggtgaagaccctcctccggagatttttacggac
aacaaaaagaaccaagctgctaaggtccagccaccctctccagcgtccctctgctctaca
gctgggtcaggctctctgcagggtcctcagacaccccagtccaccagcagctccatggct
gagggtggagacctaaaacctcccaccccagcctccactcctcatacccagatgcccccc
atgccacccgggtccaggagcagtgttaacctgcaggaccccttctctgaaggaagtgac
ccagcttttcccaggaagaacatgacgcccaactctgcctatcagtccggcatgaacaca
ccagacatgcaagggcgcatgggcacctacgaacccaacaaggacccctttggtaacatg
cggaaagttggggagcagtttctgcccgctaaccagggcccgaacagcggggtgggtgac
caacagcagcagcaaccgccacaacagcagccgcaacagcaacagcctccattcaacaga
ggaccgcccggggccatgggcacgatgccaatggggcccagacagcagtacccctatgga
ccaggttacgacaggagatcggagcaaggaatgggcccagagggcaacatgggatccggt
gctcctcagccaaaccctatgatgcctgccaacgccgacacagggatgtattcgccaaat
cgcttcccaccacagcagccacggcatgattcctatggtaatcagtatcctggacaggga
acgccccctacaggctcctacccaaatcagcagcctggaatgtacccacaacaacaacag
agttacaagcgccctgtggaagggggttatcctccatcgaaacgtcatgaggcagagtac
agtgggcctttccatggtggacaacaaccgccgcagcagcaacagcaaggaggtgcctct
gcaccctcttcaggacagcaggagtcgtacaatcagtacagcggaagtggaccctaccct
ggctctgatcgccgtccacccggcccaggcaatcagttcccctttccctttggtcgtgaa
cgtatgcagggagcgacggggcccaatgctcagcccaacatgccccctcaaatgatgcag
tcaggccctgagggtcctcagggaggcatgtggcagggaccgcgagacatgaactatcag
aactaccccagcaggcagggtggccctgggggcccaccccagggacccggttaccctggc
atgaaccgctcagaggagatgatgtcatcagaacagcgcatgaatcacgatggccagtgg
gggggtcagatgggcccgcggcagcctccttacggtccagcgggacctggccaacctatg
cctcgttcagtacagtccaactacccccagccccctcagggtgtgcagaaccacattcca
caggtgtccagcccggcctccatgccccgccccatggatagcaggacatcacctagtaaa
tctccctatatgcacggagtaatgaaaatgcagaaggctggccctccagtgcctgcgtct
cacatagtgccccctccggtgcagtcgcctctaataaggcgagacatgccttttcccccg
ggctccatagaagcttcccatcctgtcctaaaaccacgtcggagactcaccatgaaagat
atcggaaccccagaagcctggagagtcatgatgtcattaaagtctggtttattggctgag
agtacgtgggccttggataccatcaacattctcctctatgatgacaacagtatttccacc
tttgatctcaacacgttgcctggcctactggagttggtggttgagtatttcagacgctgc
ctcattgaaatcttcggcattcttcgcgagtatgaggtgggagatcctggccagaggaca
ctacttgatcctgatgccttgaaaggagactgggacagcacagaagaggaggagccacgg
gccgaggacatggaacaagaggaaggagaggatgatgaagaagaagaggaggaggaagca
gaaacggaggggccagctcgtgtgaaggaggaggaggaggagcaacagcagtgctctgag
tctcggggtcgagatgagaagacagaagatgaggagaggaagagcaagggtccttcatct
gaacagacggccccgtcgcaatccttagctgcccatgagagacccaaacaggccagcaag
tttgacaagtttcctctaaaggtggtacgaaagaaagaaccatttacggctggccagacc
aataatcatggcaaagtgcaagaatttgatagcgggttaattcattggagtgccggaggg
ggagactcaacagaacacatccagactcactttgaaccacgcaaagacttcttggaacca
cgagaacgaatatcagtgccctcaagtttgctgaagcgacgagtcccagaagacgtgttg
ctggaaaactgtttgccaatcgaggaagagaaaaggaagaatcaggatgaagaagaaagg
ccaaaagacacatcttcctcagagaaagcagaagtctcagagaaggccagccccttgctc
agcagtgaggaggagaggaaaacagactctgagacaaagacagttgaaaaagttggtaaa
agtcaccaggagaataatagacccattcctccctctgacagtgttttaacccagcagcca
cagcagactgccaccatcctggaggacgagcctcacagtaaagacgaggggccgctcatt
gcactggctaactggcaggattctttagcccgccgctgcatttgtatctccaatattgtc
cgcagcctttcatttgtgccaggcaatgaccacgagatgtccaaacatccagggctgcta
ctgctcctgggacgcctgatcctgctccaccacaggcacccagagcgcaaacaggccccg
ctcacctacgagaaagatgaggattcagacgagggaatgggccagagggatgaatggtgg
tgggactgcttggagctcctgcgggagaacacactggtcactttggcgaacatctcaggc
caactggacctctccatctaccctgagagcatctgcttgcctctgttggatgggcttctc
cactgggctgtctgcccatcagcagaggcccaggaccctttccccaccctcggcccccac
agtgctttgtcacctcagagactggtcctggagacgctaagcaaactaagcatccaagac
aacaatgtggacctcatcttggccactccaccattcagtcggttggagaagctatacggg
aacctggtgcggttaatcggagacaggaaggttgcggtgtgcagggagatggccgtggtc
ctactggccaacctggcgcagggtgatactgtggcggcccgagcaatcgctgttcagaaa
ggcagcgtgggcaacttgctgggcttcctggaggatagtctggctgccacacagcttcag
cagagccagagctctctgctacacctacaggggatgcacttcgagcccacaagcccggac
atgatgcggcgagctgcccgggctctgcacgccttagccaaggtggaggagaaccactca
gagttcacactacacgagtcccgactcctcgacctttcagtgtcccccctaatgaactcg
ctggtttctcatgttatctgtgatgtactctttttgattggccagtcatga
DBGET
integrated database retrieval system
