Epinephelus fuscoguttatus (brown-marbled grouper): 125892979
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Entry
125892979 CDS
T08419
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125892979 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125892979 (smarcc2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125892979 (smarcc2)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125892979 (smarcc2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125892979 (smarcc2)
PBAF complex
125892979 (smarcc2)
GBAF(ncBAF) complex
125892979 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
125892979
NCBI-ProteinID:
XP_049439326
LinkDB
All DBs
Position
LG1:complement(28839639..28853483)
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AA seq
1053 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNPPKTN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTAQTPATQQMMSFPDKVKEKPADLQNFGLRTDMYSKKTGSTKSKSTASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDHSSSLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPDESSDESKSDSQSGEEKREAKDSKDGATEEEEK
QTENGKKEEERGRDQEGERDADKTESEMGDGEKEKDGKEGTEEGQREAESEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHANQAA
SAPPPQGPTASQQAPSTPAPQPAPSPAPPASASAPAPESQPSQGAHTSPPCPPGATPAAH
SSSSSSTTPVLHEPNAPLPGDTLHPSAPVPPPQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccaa
gccgaaccccccaccaacaagtctctgtccagcctggtggtccagctactccagttccag
gaggaggtgttcggtcgacatgtcagcaacccaccgctcaccaagctgccgatgaagtgt
ttcctggacttcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgacgatcgagaagtccttagtgcagaacaactgcctgagcagaccg
gtgatctacctgagctctgacatagagccaaaactgctggggaaactgaaagacatcatc
aaaaggcatcaggggtcagtaactgaggacaaggcctccagctcccatgttgttgttcct
attcccaccagcttagaggaagaggagtgggtgcgtcccgtgatgaagagagataagcaa
gtgctgctccactggggatattttcctgacagttatgacacctggatcccagccagtgag
atcgaggctgctgtggaggatcctcccagcccagaaaagccccgaaaggttcatgccaag
tggattttagacctggaccagtataatgagtggatgaatgaggaggactatgaagtggga
gagggctgccctaaaaggaaaaggatctcagccaagaccctgacagatgaggtgaccacg
cctgacgagcggagggacaagaagcctggcagtgccaagaagaggaagaggtcgccgtcg
ccctccccgacccctccgcctcaggagagcaagaagaagaataccaaaaaagggccaacg
accccgtacaccaagtctaaacggggccaaagggaggaggaacaggaggatcttagtaaa
gacttggatgaagcgtcacctgttccagcatctgaagagggaaacccacctaagacaaat
aacaccaagaaggactctgattcaactccagtcaagggaggaacagatatggatgagcaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctccgagcgtgaag
ggtgaaccagtgaaaagctcggaccttcacgaggacaacgtgaccgagcagactcatcac
attatcattccgagctatgctgcctggttcgactacaacagtgttcatgccatcgagcgc
agagccctgcccgagtttttcaatgggaaaaacaaatccaaaacaccagagatttacctg
gcgtacaggaacttcatgatcgacacctaccggctcaaccctcaggagtatctgacgtcc
accgcctgtcgcaggaacctggcaggagacgtgtgtgcaatcatgagagtccacgccttc
ctggagcagtggggcctgattaactaccaggtggactccgagagcagacccacacccatg
ggtcccccaccgacctctcacttccacgtcctagcagacactccctccagtctggtgccc
ctgcagcccaagacggcccagacccctgccacccagcagatgatgtccttcccagataaa
gtgaaggagaaaccagcagatctgcaaaactttgggctgcggactgacatgtacagcaag
aagactggctctacaaagagcaagagtacagcgagctctatgagggagtggacagaacaa
gaaacactactactacttgaggggttggagatgtacaaggacgactggaacaaggtttca
gaacatgtgggcagccgtacgcaggatgagtgcatcctgcacttcctgcggctgcccatt
gaagacccttacttggaggaccactcttcatctttgggaccactggcctaccagccggta
cctttcagccaggcaggaaaccccgtcatgagcacggtggccttcctcgcctctgtcgtc
gacccacgagtggcctcagctgcggccaaatctgctctggaggagttttctcgtatgaag
gaagaggttcctgcagcgcttgtcgaggctcatgtacggcgggtggaggaggcagcgagg
gtcagtggccgacaggacccactgtatggcctggagggtagtggcatcgcaggcactggc
ctggaggagggagagagacctgatgaaagcagtgatgaaagcaagagtgacagccaatca
ggcgaagagaagagggaagccaaggacagcaaagatggagcgaccgaggaagaggagaag
cagacagagaatgggaagaaggaagaagaaagaggaagagaccaagaaggagagagggat
gcagacaaaacagagtccgagatgggcgacggggagaaggagaaggatggaaaagaggga
acagaggaaggacaaagagaagcagagagtgaaggagagaggaaggcgaaggtggagcgg
gatgtgggagagggaaatctggccactgctgctgcgtctgcgctcgccgctgctgctgtt
aaagccaagcacctggctgcagtggaagagaggaagatcaaatctcttgttgctctgctg
gtggagacccaaatgaagaagctggagattaaactgcgacactttgaagaactggaaacc
atcatggacagagagagggaggctttggagtaccagcgtcagcagctgctggctgaccgt
cagtccttccacatggagcagttgaaatacgccgagatgagggcccgccagcagcacttc
cagcagatccagcaccagcagcacagccaggccgggggccctcatgccaaccaggccgcc
tcagccccgccgccccagggcccgactgcaagtcaacaagctcccagcacaccagcgcca
cagccggcccccagccccgcgcccccagcctcagcttctgccccagcccctgagtcccaa
ccttctcagggcgctcacacctcgccgccctgccctccaggcgccaccccagcagcccac
tccagctccagctccagcactactcctgtactccatgagcccaacgcccctcttcccggg
gacacactccacccctcagctccagtcccacctccacagtga
DBGET
integrated database retrieval system
