KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125893349
Entry
125893349         CDS       T08419                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125893349 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:efo03400]
    125893349 (xrcc1)
DNA repair and recombination proteins [BR:efo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125893349 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 125893349
NCBI-ProteinID: XP_049439907
LinkDB
Position
LG8:21610338..21644064
AA seq 627 aa
MPEIKLKHVVSCSTEDNTHKADNLLSSDTYRKWKAARAGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVMSSFMSPTESRNGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPTNSPKLTKLGQFRVKDESSTP
GPSLQPGSLFFNRDNAAKSSTSLKVSPQSEKLSYAAAALQAGGSSSHSSGQASSSSSASP
QPPAKRKFEFSKERQSASGPPPSKKISPAGSPEGKAATPKHKPSPASTPSPSTAKASPAQ
KPPDKKRESQSKPEPKPKQQKASAQQVPFQRMMEGVVFVLSGFQNPFRGELREKALDMGA
KYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVLDCHKRKQKISYKRYLMDGAE
SSSESEMEDDDQSEEEINTKTPLKQRKQVTPKKTPEKRNDDDEYAGSTDVDEPGGGDEDS
AVDTEDELQRVENESRQKKAAAAEGKTVNQEDPYGGSTDENTDAEAEEDHPIPELPDFLK
GKHFFLYGKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMENSNL
NFVKPAWIYSINERQKLLPYQPYSVVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaactcaaacacgtcgtgtcttgcagcaccgaggacaatactcacaag
gcagacaacctgctgagctctgatacctacaggaagtggaaagcagcaagagctggggag
aagcagacatcagtcattctgcagttcgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaagggtcggctttcatcgaggtgctggtggggaactcttcagctgtcagagac
caggattatgaggttcttttggttatgtcttccttcatgtcccccacggagagccgaaat
ggcaccaacatgaaccgggtgcgattctttgggcccaaccagctgcagaagagcacagca
caggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaacatagca
tacggactggcctttgttaagtttcattcaccacctgacaaaaatgatcctcctccaaca
aactccccgaaactgacgaagctggggcagttcagggtgaaggatgagtcttctacacct
ggtcccagccttcagccaggcagtctcttcttcaatcgcgacaatgcggcaaagtccagt
acttcacttaaagtgtctcctcagagtgagaagttgagttacgccgctgctgccctgcag
gctggtggcagctcgtcccactcgtcaggtcaagcttcctcctccagctctgcctcacca
cagccaccagccaaaagaaaatttgagttcagcaaagagcggcagtctgcctccggccct
cctccctccaagaaaataagcccagctggctcgcctgagggcaaagctgcgacccccaaa
cacaagccgagcccagccagcacgccgagccccagcacagcaaaagcttccccggcacag
aagcctcctgacaagaagcgggagagccagtccaaacctgaacccaaacccaagcagcag
aaagcaagcgcgcagcaggtcccattccagcggatgatggagggggtggtgtttgtcctc
agcggcttccaaaaccccttcagaggggagctgagggaaaaggctctggacatgggagct
aaataccgacctgactggacgcccgactccacacatctcatctgtgccttcgccaacact
cctaagtacagccaggtgaaatcagcagggggcatcatcgtacggaaggaatgggtactt
gactgccataagaggaaacagaagatctcctataaacggtatttgatggatggagcagag
tcgagttcggagagcgagatggaagatgacgaccagagtgaagaggaaattaacacaaag
actccactgaagcagaggaaacaagtgacccccaaaaagacaccagagaagaggaatgat
gatgatgagtatgctggctccactgatgtggatgaaccaggaggtggtgatgaggactct
gccgtggacaccgaggatgagctgcagagggtggagaacgagagcagacagaagaaagca
gcagcagcagaggggaagacagtgaaccaggaggatccgtatggggggtcgacagatgaa
aacacagacgctgaggctgaagaggatcaccccatccctgagctaccagacttcctgaaa
ggaaagcactttttcctctacggtaaattccctaacaacgagaggcgtctactgttgaga
tacatcgttgcctttaacggactgattgaggactacatgacagagaaggtgcagtttgtg
gtgaccagtgaagggtggcacgactcctttgaagacgcactgatggagaacagcaatctg
aactttgtcaagcctgcgtggatttactcaattaatgaacgacaaaagctgctgccctat
cagccctactctgtcgtcccctga

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