Epinephelus fuscoguttatus (brown-marbled grouper): 125893402
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Entry
125893402 CDS
T08419
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
efo00535
]
125893402 (col14a1a)
Proteoglycans [BR:
efo00535
]
Extracellular matrix (ECM) proteoglycans
Others
125893402 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
DUF4959
Mid1
Motif
Other DBs
NCBI-GeneID:
125893402
NCBI-ProteinID:
XP_049440011
LinkDB
All DBs
Position
LG8:26170127..26359016
Genome browser
AA seq
1782 aa
AA seq
DB search
MLSTGQIRWCLWAPLVLLALVSHFPSKAQGQVPSPRRLRFKVLSPSKLLVTWKEPKGDFD
SYLFLYSSAPGGQQREIIISKSDTKVLITDYSPAKDYIVSVISVSGSEQSRPLKGRHKAE
RGESDGEDKTEPERLTESVVPPEDANEISGADQFVCRTEAIADIVILVDGSWSIGRLNFR
LVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNTFSSKDAVIDAVKNLPYKGGNT
LTGLALTYILENCFKPESGSRTGIPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGVK
NADENELHSIASEPDETHVYNVADFNVMSSIVEGLTKTVCEQVEQQDKDIKQKHTPEQIG
APLELVTSEVTARSFRVSWSPAPGNVEKYRVVYYLAQGGEPQEAVVDGSETSAVLEHLSS
LTEYQLAVFAVYANEASDALRGSETTLAHPTVTGLQLFDVTHSTMKARWDDVDGVSGYML
LYAPLTDDGASDEKEIRVSDAVTELELDGLLPHTEYTVTVYAMYGEEASDPLTNQETTLP
LSPPSNLQFSDITHNSAHISWDPVPRGVKGYRIMWVKTDGLITEEVEVGPVNSYDLSGLT
SLMEYSVAIFALYDAGQSEPLTDGFTTTPVPGPLDLRSSDVDTDSFQVSWDHSANDIVLY
RLSWAPFTGGDTKEVVLSGSDNRYILTGLSPSTEYEVMLTAVFKDESESDTVSVIETTLA
KTTTIATATTVARQAVRNLLLSDETTQSLEASWELEDPHVESYRVSYADLRGDHKDESVV
VPGGQRRAVLQPLLSDTQYKVTVTPVYADGQDGISVSALGATLPLLSPGNLRVSEEWFNR
FRVTWDPPQTPTAGFKIVYQPINVPGPVLETTVGEDVNSMLLLNLQSGTEYSVQVTASYP
TGQSEPLLANAKTLYLGVSGLSTYQIRPNSLCVQWQPLLHATLYRVSIQSTLNGQRQEVS
LGGGASRQCFYDLTPSSQYQISVHTQMQEMEGPSVSITDMTMPAPTQAPTEPPTTEPPPT
IPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGTDGTQVAIAQFS
DDARTEFQLSSHGNKEELLEAIQKIRYKGGNTKTGRAIKHVKESIFTPEAGARRGIPKVL
VVLTDGRSQDDVNKVSKEMQMDGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNS
FPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNEPLVG
LILDNSGKTLTFFNYDYKGDFQTVTFEGTDIKKIFHGSFHKLHVTISKTSVKVVLDCSVV
GEKSVSAAGNITTDGVEILGRMVRSRGRRDNSAPFQLQMFDIICSTSWASRDKCCELPAL
RVEEQCPSMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPQGPMGEIGPTG
PSGPPGPQGPSGLSIQGPPGAAGEKGERGDIGPAGPMGVPGSSGSPGRDGPPGTRGLPGN
SGPQGRQGPPGPVGAPGAPGAPGPGGAAGSQGDQGLPGPAGTKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYNSILNQIPAQSAVSIRTVPGPPGEPGRRGPPGPQGEQGPSGRP
GFPGTSGQNGRPGERGLPGEKGERGNPGIGSQGPRGQTGPPGPPGEGRTGSQGPTGRPGS
PGAPGRPGNPGTSGPPGPPGYCDQNSCLGYNVGVQQDYGNDY
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaacggggcagattaggtggtgcttgtgggctccactggtgcttctggccctc
gtttcccatttcccctctaaggcacagggccaagtcccatctccgaggaggctgcgtttc
aaagtgctgagcccgagcaaactccttgttacatggaaggagcccaaaggagactttgac
agctatctattcctctacagcagtgcaccaggtggtcagcagagggagatcatcatatca
aaatctgacactaaggtgctgataacagactacagccccgccaaggactacatcgtcagt
gttatcagtgtcagtggcagtgagcagagcagaccactgaagggcagacataaagctgaa
agaggtgagagtgacggagaagacaagaccgagccggagaggctgactgagtcagttgta
cctcctgaggatgccaacgagatctctggagctgatcagtttgtgtgccgcactgaggcc
attgcagacatcgtgatcctggtggacggctcctggagtatcggtcggctcaacttccgg
ctggtccgcatgttcttggaaaatctggtcaatgcctttgatgttggcattgataagaca
aggataggtctggctcagtacagtggtgaccccaggatagagtggcatctaaatactttc
tcaagtaaagatgctgtcattgatgccgttaagaacctgccatacaaaggaggaaacact
ctaacaggccttgcactgacttacatcttggagaactgcttcaagcctgagtctggctca
aggacgggtatacccaagattgggatcctcatcacagacgggaagtcccaggatgatgtc
atacctccggcggagagcctgcgaaatgctggtgttgagctgtttgctattggtgttaag
aatgctgatgagaacgagctgcactccatcgcctcagagccggacgaaactcacgtctac
aacgtggccgactttaacgtcatgagctccattgtagagggtctgaccaagacagtgtgt
gaacaggtggagcagcaagacaaggacatcaaacagaaacacacaccagagcagataggg
gcgccgcttgagctggtgacatcagaggtcacggccaggagctttagggtgtcatggagc
cccgcccctggaaacgtagagaaatacagagtggtgtattaccttgctcagggcggagaa
ccacaggaggcggtggtggacggcagtgagacttcagcagtgttagagcatctcagctct
ctcactgagtaccagctggctgtgtttgctgtgtacgcaaacgaggcaagtgatgctctc
agaggatcagaaacaaccctggcccatcccacagtgacgggcctccagctgtttgatgtg
acacacagcaccatgaaggcgagatgggacgatgtggatggagtttctggctacatgctg
ctgtatgcaccgctcacagatgatggagcgtcggacgaaaaggagattagggtgtcagat
gcagtgaccgagctggagctggatggtttgctccctcacactgaatacaccgtcactgtg
tatgccatgtatggggaggaggccagtgaccctctgacaaaccaggaaactacattacca
ctgagtcctcccagcaacctccagttctctgacatcactcacaactccgcccacatcagc
tgggaccccgtgcccaggggagttaaaggttaccgcatcatgtgggtcaagacggacgga
ttaatcactgaggaggtggaggtgggtccagtaaactcctatgatctcagcgggttgacg
tctctaatggagtactcagtggccatcttcgccctgtacgatgcgggccaatcagagcct
ctcacagacggattcaccacaactccagttcctggccctctggatctacgctccagtgat
gtcgacaccgacagcttccaggtcagctgggatcactcagccaatgacatcgtcctctac
aggctgtcctgggcaccattcacaggcggcgacacaaaggaggtggtcttgagtggaagt
gataacagatacatcctgaccggtctgagtccgtccactgagtacgaagttatgttgacg
gctgtgttcaaagatgaatcagagagtgacaccgtctctgtgatagagaccacattggcc
aagacaacaacgattgctacggcaaccacagtggcacgtcaggctgtgagaaaccttctg
ctgagtgacgagaccacccagagcttagaggcatcatgggagctggaagacccccatgtg
gaaagctacagggtctcctacgccgacctcaggggcgaccacaaagacgagtctgtggta
gttcctggtggtcagaggagagcagtgcttcagcctttactgtcagacactcagtacaaa
gtgacagtcacaccggtgtatgcagatggacaagacggcatcagtgtctctgccctgggt
gcaacgttgcccctcttgtctcctggaaacctacgtgtgtcggaggagtggttcaaccgc
ttcagggtcacctgggatccacctcaaactcctacagcgggtttcaagatcgtctaccag
cctatcaatgttccaggacctgttttggagacaacagtgggtgaagatgtgaactccatg
ctgcttctgaatctacaaagtgggacagagtacagcgttcaagtgacagcgtcctacccc
acaggacaaagtgaaccactgctggcaaatgccaagacgctgtaccttggtgtctctggc
ttgtcaacctaccagatacgtcccaacagcctgtgtgtccaatggcagcctcttctacac
gccacattatacagagtctccatacagtctacacttaatggtcagaggcaagaagtgagt
ctgggcggcggtgcttcccgacagtgcttctatgacctcactcccagcagccagtaccag
atcagcgttcacacccagatgcaggaaatggagggaccttctgtctccatcactgacatg
acaatgccagcgcccacgcaagctccgactgaaccccccaccacagagccccctcccacc
ataccacctgctaaagaagtgtgtaaggaggccaaggctgacctggcattcctggtcgac
ggttcctggtccatcggagatgacaacttcatgaagatcacacgtttcctctacagcact
atgggatcgctggatctgattggtacagatggaacccaggttgccatcgctcagtttagc
gacgacgctaggacagaattccaacttagttcccatggcaacaaggaagagctgctggaa
gcaattcagaagatcagatacaagggaggaaacaccaagacaggtcgggccatcaaacat
gtgaaggagtctattttcaccccagaagctggagctagaaggggcattcctaaagtcctg
gttgttctcactgacggacgttcacaagatgatgtcaacaaagtgtccaaggagatgcag
atggatggctacatcatctttgccattggctttgccgacgcagactacggggagctggtg
aatattgccagcaagcccagcgaaagacatgtcttctttgtggatgatttggatgctgtg
aagaaaatcgaagagcagctcattacttttgtctgtgaggccgccaccgccacgtgtcca
tctgttttgatgagtggtaacacgatggcaggtttccgtatgatggagaagtttggccta
gtggagaaggagtacagcaccatacctggagtttccctggagccgggctcattcaacagc
ttcccctgttacagattacaccgtgacgccctcgtgtcacagcccaccaagtaccttcac
cccgaaggtttaccctctgactacaccatttctatgatgctccgtctacttcctgagacc
ccgcaggagccctttgcattgtgggaaattctcaacaaggacaacgagccattagtggga
ctgattttggacaactctggaaaaaccttgacgttcttcaactatgactacaaaggagac
ttccagaccgtcacctttgaaggaactgacatcaaaaaaatcttccatggcagcttccac
aagctccatgttactatcagcaagacgtctgtgaaggtggtgttagattgttctgtggtt
ggggagaaatccgtcagtgctgctggcaacattaccactgatggtgtagagatccttgga
aggatggttcggtccagaggcagacgggacaactccgctccgttccagctccagatgttt
gacatcatctgcagcacatcctgggccagcagagataagtgttgcgagctgccagcactg
agagttgaggagcagtgcccctccatgcctcatgcctgcacatgctcccaggacagcaaa
ggacctcctggaccttcaggaccccctggcggtccaggcataagaggagccagaggagac
agaggagagccaggagtgacgggacctcagggaccaatgggagaaatcggcccaactgga
ccctcaggaccgcctggtcctcagggacccagtggtctctccattcaggggcccccgggc
gctgccggggaaaagggagagagaggagacatcggtccagccggaccaatgggtgttcct
ggaagctcaggctcccctggtagagatggccccccaggtacaaggggtctgccgggtaat
tctggaccacagggacgacaaggacctcctggacccgttggagccccgggagcaccagga
gctccaggacctggtggggcagcagggtcccaaggagatcagggacttcctggtcctgct
ggtaccaaaggcgataagggagaacgaggggatgtgcagtcccaagcggctgtgcgtgcc
atcgcacggcaagtgtgtgaacagctcatccagagccacctgtctcgctacaactccata
ctgaaccagattcccgcccagtcagcggtgtcaatccgaacagtacccggaccacctgga
gagccgggtaggagaggccccccaggacctcagggagagcaggggccatccggcaggcca
ggtttccctggtaccagcggccagaacggacggccaggagagagaggtctgccgggagag
aagggagagagggggaatcctgggattgggagtcagggacctcgaggacaaacgggacca
ccaggcccgccaggtgaaggacggacaggcagccagggccccactggtcggcctggcagc
ccgggagcaccggggaggccgggaaatccaggtacatcaggaccacctggtccaccagga
tactgtgaccagaactcctgtctgggatacaacgtcggagttcaacaggactatgggaat
gattactga
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