Epinephelus fuscoguttatus (brown-marbled grouper): 125894138
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Entry
125894138 CDS
T08419
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04120
Ubiquitin mediated proteolysis
efo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125894138 (syvn1)
04120 Ubiquitin mediated proteolysis
125894138 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125894138 (syvn1)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125894138 (syvn1)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125894138 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
125894138
NCBI-ProteinID:
XP_049441299
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All DBs
Position
LG9:complement(38273435..38285556)
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AA seq
633 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAAAPGPTEAPQGSTEATQAAGTSQP
TSSTAEAAAGTAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSE
EELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NSSASPPAAGSSTDSPSKEKDSSSSEQADEATVSSQPADSTSTASDTERKEEMDEAAVAA
GDEDGEPNAAELRRRRLRKLETSSPSSPPPPDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgactgccaccagtctggcgctgactggggctgtggtggcg
cacgcttacctcctcaaacaccaattctacccgactgtggtctacctcaccaagagcagt
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttctttggacagctaagggctgcagagatggagcatctgattgagcgc
tcctggtacgctgtgaccgagacgtgcctggcattcactgtgttcagggacgacttctcc
cctcgcttcgtcgccctcttcacactcctgctcttcctcaagtgcttccactggctggct
gaagaccgggtggactttatggaacgtagtccaaacatatcctggatttttcacttcaga
gtgttatctctcatgggactgctagctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacaaccttcattaagtaccttctgcacactattgacctgcag
agtgagaatccctgggacaacaaggccgtctatatgctctacacagagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtatctggctatgaggcagttcaagaaagctgttaca
gatgctataatgtctcggagagccattcgcaacatgaacacactataccctgatgctact
cctgaagatctgcaggcctctgacaacgtctgtattatttgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccattccagctgcctgcgctcctggttt
cagaggcagcagacctgcccaacctgtcgcatggacgtcctccgtgcatccaataacaat
cagactccagcccctgcccaggccccgccccctgctcctgcggcccctgctaacgcccct
gcagccccacccgccaatgtggctccaggcatgttacctggctttcctcctggcgtcttc
cccttctggggtcccttccctgcagtgcctccccctgctgcagcagctgcagctcctggt
cccactgaagctccacagggcagcacagaggccacacaggcagctggtaccagccagccc
acctcatcgaccgcggaggcagctgcaggcactgctgctccaggatcagcaatcccaggc
ttccccttctccttcccccctccgcccttccccactgcaccgtggctgcccatgccacca
cctcctccctttgtgtcgtcaatgcctcctcctcctccgtctctgtcccggctgtcagag
gaggagctgagggagctggaggcggagggtcggcggggcctggaagccaggctccagtgt
ctccagaacattcacactctgctggacgccgccatgctcaacatccaccactacctcagc
acggtcgccacactcactcctcctcgggctgagggcagcactggagaagccagtgggaca
aacagcagtgcttcacctcctgcagctggcagtagcacagacagtcccagcaaggaaaag
gactcttccagctccgagcaggcggacgaagctaccgtctcctctcagccagctgactct
acttctactgcctcggacacagaaagaaaagaggagatggacgaagcagcagtggcggct
ggggacgaggacggagagcccaacgctgctgagctgagacgtcgccgtcttcgcaagcta
gagacatcatcaccatcatctccaccccctccagacaactga
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