Epinephelus fuscoguttatus (brown-marbled grouper): 125894314
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Entry
125894314 CDS
T08419
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125894314 (pcdh18b)
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Protocadherins
125894314 (pcdh18b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
125894314
NCBI-ProteinID:
XP_049441589
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All DBs
Position
LG9:complement(41869572..41882145)
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AA seq
1239 aa
AA seq
DB search
MQAKMIQTKGNLFSSALFKLLLLVALMHGTTGKTLKYKVYEEQKVGTVIARLKEDVAGVL
SKLPSSLTFRFRAMQRGSTPFLSVREEDGEISIGTKIDREKLCEKNLNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGTRIPLDGAVDADVGENSLHTYS
LTPNNFFKIDVRTRTDGAKYAELVVMRELDREVQSSYQLQLTASDNGVPPKSGSTLLKIS
ISDSNDNSPAFDEQAYIINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKINPENGHITLIKKVDYETTASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISEGAPVDTFIALVRVDDSDAGLNGEVVCRLHGHGHFRLQKTHEKNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPCFEKSRYEVFKS
ENNSPGAYLMTVVASDPDLGTNGQVTYTIIDALVQGSPISTYVTIDPSNGAIYALRSFDH
EDVSRIAFTVQARDGGNPVLSTNTTVLLTVLDENDNPPVIHSPSLRNHTAELPVWKYASP
GQLITALKVTDRDAGTNGEVSCAIVGGNEDGLFVMDARRCELRTNASLEQAPREVMEIRI
EVQDRGTIRLSTGALFRLSLQENMDILPPLYPTGSSQAPLDLSLIVIISLGAVCALLLIV
MVMFATARCSREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTLPVRAH
PRSPSASPTPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLL
SMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMDR
LLGEGFTEIYAPDGQHRTHAAMRLCTEECRVLGHSDQCWMPPLASPASSSSDYRSNLYIP
GEEARQATDLSQEKTPQPCTDTGPARNQSFSTFGKDLGGEDGAEEEGGGDHGGEARDEDL
CGTTSLLSEMSSVFQRLLPQGLDSYIQVNENQKGTSLSGVGVPMTGSLDRRRGHLPGKPN
PSVHQQGVAAWAANTHFQNPGSSIGPSGHHQAGSYHTLKPSTKLSSQSSSHKGSQAPKNS
PQNSAHPPKPHSSPLLTALVSPTMVQASPAPVAVPVALPGPSSKWLPAMEEIPENYEEDD
FDSVLSHLQGKRSDSRHELVDASELVAEINKLLQDVRQS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaaaatgatccaaaccaaaggaaatttattctcttcggcactattcaaacta
ctgcttttggttgcgcttatgcacggcaccaccggcaagactttgaaatataaagtttac
gaggagcagaaagtgggcacggtaattgcacggttaaaggaagatgtagccggggtttta
tccaaactaccgagttccctgacctttcggttccgcgctatgcagcgagggagtacgccg
ttcctgtctgtccgagaggaggacggagagatcagcattggcaccaaaatcgaccgtgag
aagctctgtgagaaaaacttgaactgctcgattgaattcgatgtggtcacactcccaacg
gagtacttgcagctgtttcatgtggaggtggaagtgctggacattaacgacaactccccg
cacttctcccgcgccatcgtccccattgagatctcggagagcgcgtctgtggggacgcgc
atcccgctggacggcgctgtggatgccgacgtcggggaaaactccctgcacacgtactcc
ctgacaccaaataacttcttcaagatcgatgtgaggaccaggactgatggggccaagtac
gcagagctggtggtcatgagggagttggaccgggaggtgcagtccagttaccagctgcag
ctcacggcctcggataatggcgtgcccccaaagtctggctctactttgcttaagatcagc
atctcggattccaacgacaacagcccagcctttgacgagcaggcctatattatcaatttg
ctggaaaactctcccctagggactctaatcattgatttaaacgccacagatccagacgag
ggcactaatgggaaaatagtctactctttcagcagtcatgtctcgccaaagatcttggaa
acatttaagataaacccagaaaatggccacattactcttattaaaaaagtggactatgaa
accactgcttcttatgagctggatgttcaggctcaggacttgggccctaattccattcct
ggactttgcaaaattgtggtgaaagtggtggatgtaaatgacaacaaaccagagataaac
atcaacctgatgacgcctggaaaagaggaggtggcctacatttcagaaggtgccccagtg
gacaccttcatagctctggtgcgtgttgacgacagcgatgctgggctcaacggtgaggtg
gtgtgccggctgcacggccacggccacttcagactccagaagacccacgagaagaattac
atgattctcaccaatgtctcactggacagggagaagaggtcagagtacagtctgacagtc
atagctgaggacaggggctcccccagcctctccaccatcaaacacttcactgttcaggtg
ctggatgaaaacgacaatcccccgtgttttgaaaagagccgctacgaggtctttaaatca
gagaacaactctcctggagcctacctgatgaccgtggtggcctcagatccagatctgggc
accaatggccaggtcacctacaccatcatagatgctctggttcaggggagtcccatctcc
acctacgtcaccattgacccttctaatggcgccatctatgccttacgcagctttgaccac
gaagatgtcagccggatcgccttcactgttcaggcacgtgatgggggaaaccctgtgctg
tcaactaacaccactgtcctgctaactgttctggatgaaaatgacaacccacccgtcatc
cactccccctccctccggaatcacaccgctgagctgccagtgtggaagtatgcatcacct
ggtcagctgatcacagcgctcaaagtcacagaccgcgatgctggcaccaacggagaggtg
agctgcgccattgttggtggcaatgaggatggcctttttgtgatggacgctcggcgatgt
gagctcagaactaatgccagcctggagcaggctccacgggaggtgatggagatcaggata
gaagtgcaggacaggggcaccattcgactgtccacaggggccctcttcaggctctccctg
caggagaatatggacatcctcccccctctctatcccactggctctagccaggctccactg
gatctctccctcatcgtcatcatctctctgggtgctgtttgcgctctgctgctcatcgtc
atggtaatgttcgccactgcccgctgcagccgtgagaagaaagaccccagacacaactac
aactgccgtgtggcagagaacagctaccagaaccaccccaagaagcctgccaggcagatc
cacaaagcagacatcaccctggtcccaaccgtcaacgggactcttcctgtacgggcccac
ccacgctccccctcagcctcccctacacctgagaggggcaccctggggagcaggcagagc
catcatagccgccagtccctcaacagcctggtcaccatctcttccaatcatgtgccagag
aactttgccctagagctggcccacgccactcctcctgtagagcaagtttcacagcttctg
tccatgctccatcagggccagtaccagccacgaccaagtttcagaggcaacaaatacacc
aggagctacagatatgccctgaatgagatggataaattcagtctgaaggacagcggtcgt
ggagacagcgaggctggtgacagcgactacgagcctggcagggagtcacccatggatagg
ctccttggtgagggctttactgagatatatgcccctgatggccagcacagaacgcatgca
gctatgaggttgtgcacagaggagtgtcgtgtcctgggtcactcagatcagtgctggatg
ccccccctggcctctccggcctcatcctcctctgactaccgcagcaacctctacatccct
ggagaagaagcccgccaagcaactgacctctcccaggaaaagacaccccagccctgcact
gacactggccctgcacggaaccagagcttctccacctttggcaaggacctcgggggtgag
gacggtgcagaggaggaggggggaggggaccatgggggcgaggccagagatgaagacctc
tgtgggaccacgtcattgctgtcggagatgagtagtgtgttccagcggttgctaccccag
ggtttggactcatatatccaggtcaatgagaaccaaaaggggactagtctcagtggggtg
ggtgtacccatgactggatctttagatcgcaggaggggccatctccctggcaagcccaac
ccctctgtccaccagcagggtgtggcagcctgggctgccaacacccacttccagaaccca
ggcagcagcatcggcccatctggccaccaccaggctggcagctaccacaccctgaaaccc
agcaccaagctcagctctcagagcagcagccacaagggctcgcaggcgcccaaaaacagt
ccccagaacagcgcccacccccccaaaccccacagcagccccctgctcactgcactggtc
agccccaccatggtgcaggcctccccagccccggtggcagtgcccgtggcactccctggg
ccctcctccaaatggctgccagccatggaggagatcccagagaactacgaggaggacgat
tttgactcggtgctcagccaccttcagggcaaacgcagcgacagccgacatgagctggtg
gatgccagcgagctggtggctgagataaacaaactcttacaggatgtccggcagagctag
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