Epinephelus fuscoguttatus (brown-marbled grouper): 125894537
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Entry
125894537 CDS
T08419
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125894537 (ssrp1a)
03036 Chromosome and associated proteins [BR:
efo03036
]
125894537 (ssrp1a)
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125894537 (ssrp1a)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125894537 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
125894537
NCBI-ProteinID:
XP_049441961
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All DBs
Position
LG9:complement(22611636..22630919)
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AA seq
702 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDLEKISEFFKANYKVELEEKDMCVKGWNWGTAKFSGPLLS
FDVNDSTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMNEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGNIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDAESDES
FNPGEEDDDIAEEYDSNASASDSSEDGGDSEEESSKKKKVKKAKVVKEKKERKPRKEKKQ
KDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWETKAG
EAKRQYDKAKKEYKESGGGATSTSKKESKKGGKKEDKKRKSAGGDKDKERGGNDSFKSRE
FIETSESSSDSDHKSKSKRKKESEEEEEEAVSTPASSEEDSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatttaccaggaggtgaaaggctcctggaacgac
gggcggctacgtttcagcaagcaaaatgtggtttacaagagcagcaagacggggaaggtg
gacagcatcccggctggtgagctcaacctggcccagtggagacgagtgtgtttaggtcac
ggcatcaagctgggcaccagcacaggacacgtctacaaatatgacggcttcagggacacg
gacttggagaagatctcagagtttttcaaggcaaactacaaggtggagctcgaggagaag
gacatgtgtgtgaaggggtggaactggggaacagccaaattctcagggccgctgttatca
tttgatgtaaatgacagtacagcgttcgagatcccactgtccaacgtgtcccagtgcgcc
acggggaagaacgaagtcactctggagtttcaccagaatgatgacactgaagtctccctc
atggaggtccgattctacgttccgcccagccagtctgatgaacgacaagaccctgtagag
gcttttgcccagaatgtgttgtctaaggctgatgtgatccaggccacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatacgacatccgtatctac
ccgactttccttcaccttcacggtaagacctttgattacaagatcccctacacgactgtc
ctgcgtctgttcctgctgcctcacaaggatcagaggcagatgttctttgtgatcagcctg
gatcctcccatcaagcagggtcagacgcgttatcactttctcatcctgctgttttccaag
gaggaggacatcaacctcaccctaaacatgaacgaggaggacgttgagcgccgttttgag
ggcaaactcagtaaaaacatgtcagggtctctgtacgagatggtcagcagggtgatgaag
gccctggtcaaccgcaagatcaccgtgcctggaaacttccagggtcattctggagctcag
tgcatcacctgctcctacaaagcgtcctcaggcctcctctatcccctggagaggggcttc
atctatgtccacaaaccccccgtgcacctgcgctttgaggagatctcttgcgtcaacttc
gccagaggtaccaccacaactcgatcctttgactttgagattgagaccaagcagggaaat
cagtacaccttcagcagcatcgagagagaagagtacggaaaactgttcgacttcgttaat
gccaagaaactcaacatcaagaatagaggattcaaagagggcatgaagggtaatatcgat
gagtacagcgactcagacgatgaccagcacgatgcctacctggagaggatgaaggccgag
ggcaagatcagagaggagggcaacgacagtgacgaatcagatgcagaaagcgatgagtcg
tttaaccctggagaagaggatgatgacattgcagaagagtacgacagcaacgcctcagca
agcgacagcagcgaagatggtggcgatagtgaggaggagagctctaagaagaagaaggtc
aagaaagccaaagtggtgaaagagaaaaaagaaagaaaaccacgtaaagagaagaagcag
aaagataccggcggccccaagaggccgatgagtgcctacatgctgtggctcaactccagc
cgtgagcgcatcaagtcggagaacccaggcatctccatcacagagatttcaaagaaggcc
ggagagatgtggagacaactgggcaaagacgagaaggaggagtgggaaacaaaggcagga
gaggcaaagaggcagtacgacaaagcaaagaaagagtacaaagagagcggtggaggagca
acttccacttcgaagaaggagagtaaaaaaggaggtaagaaggaggacaagaagaggaag
tctgccgggggagacaaggacaaggagcggggaggcaatgacagctttaagagtcgagag
ttcatcgagaccagcgagagttcatcagactctgaccacaagagcaagtccaagaggaag
aaggaatcagaggaggaggaggaagaggccgtgtccacacctgccagctcagaggaagat
tcagactaa
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